Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 5.8e-84 314.3 172 100.0
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 5.4e-82 307.8 172 97.7
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 4.6e-81 304.7 172 96.5
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 2.1e-70 269.2 172 87.8
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 3.1e-61 238.8 154 83.1
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 1.3e-56 223.4 175 73.7
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 9.6e-55 217.2 169 74.0
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 4.8e-54 214.9 175 71.4
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 1.2e-52 210.3 175 70.3
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 9.9e-52 207.2 175 70.3
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 2.9e-51 205.7 175 69.7
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.9e-50 203.0 175 68.0
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 3.7e-46 188.7 176 62.5
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 8.1e-46 187.6 176 63.6
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 4.0e-45 185.3 176 61.9
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 4.5e-44 181.8 176 61.9
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 9.9e-44 180.6 176 60.8
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 1.3e-43 180.3 176 61.4
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.3e-43 180.3 176 60.8
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 1.7e-43 179.9 176 60.8
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 1.7e-43 179.9 176 61.4
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.2e-43 179.5 176 62.5
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 5.5e-42 174.9 176 60.8
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 9.3e-42 174.1 176 59.1
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 1.3e-40 170.2 176 58.5
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 1.3e-40 170.2 175 58.3
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 1.8e-40 169.9 175 60.0
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 3.9e-40 168.7 173 59.5
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 5.1e-40 168.3 177 58.8
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 8.7e-40 167.5 177 58.8
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 2.5e-39 166.0 173 60.7
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 3.3e-39 165.6 175 58.9
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 7.4e-39 164.5 176 56.8
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 9.6e-39 164.1 176 58.0
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 1.6e-38 163.3 178 58.4
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 2.8e-38 162.5 176 58.0
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 2.8e-38 162.5 176 56.2
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 1.1e-37 160.6 176 56.8
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 6.9e-37 157.9 170 54.7
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 1.2e-36 157.1 176 56.2
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 1.2e-36 157.1 175 54.9
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.5e-36 156.8 176 54.5
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 4.5e-36 155.2 175 54.9
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 5.8e-36 154.8 178 55.1
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 5.8e-36 154.8 175 55.4
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 1.3e-35 153.7 176 53.4
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 2.2e-35 152.9 174 54.6
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 3.8e-35 152.1 182 55.5
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 4.9e-35 151.8 176 55.7
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 4.9e-35 151.8 174 57.5
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 8.4e-35 151.0 177 55.9
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 1.1e-34 150.6 178 57.3
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 1.1e-34 150.6 170 54.7
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.4e-34 150.2 176 52.8
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 1.9e-34 149.8 176 53.4
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 2.5e-34 149.4 150 60.0
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.2e-34 149.1 176 52.3
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 4.2e-34 148.7 205 49.8
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 7.1e-34 147.9 172 53.5
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 7.1e-34 147.9 176 52.8
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 3.5e-33 145.6 175 53.7
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 6.0e-33 144.8 176 52.3
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 6.0e-33 144.8 176 53.4
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 6.0e-33 144.8 174 50.6
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 7.9e-33 144.4 176 52.8
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.0e-32 144.1 176 51.7
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 1.0e-32 144.1 174 52.9
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 1.3e-32 143.7 172 52.3
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 2.3e-32 142.9 177 50.8
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 3.0e-32 142.5 170 52.9
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 5.1e-32 141.7 175 52.0
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 8.7e-32 141.0 170 51.8
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 1.1e-31 140.6 168 52.4
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 1.1e-31 140.6 170 52.9
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 1.5e-31 140.2 169 52.1
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 2.5e-31 139.4 178 50.6
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 3.3e-31 139.0 153 56.9
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 3.3e-31 139.0 170 52.4
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 7.4e-31 137.9 177 52.0
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 9.7e-31 137.5 170 52.4
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 1.6e-30 136.7 174 55.2
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 1.6e-30 136.7 170 52.9
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 1.6e-30 136.7 170 52.4
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.2e-30 136.3 176 51.7
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 2.8e-30 136.0 182 52.2
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 3.7e-30 135.6 176 48.3
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 8.2e-30 134.4 176 50.0
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 8.2e-30 134.4 171 51.5
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 1.4e-29 133.7 166 51.8
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 1.8e-29 133.3 172 51.7
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 3.1e-29 132.5 170 50.0
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 3.1e-29 132.5 170 50.0
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 5.3e-29 131.7 173 50.3
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 5.3e-29 131.7 227 44.5
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 5.9e-28 128.3 174 48.3
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 1.0e-27 127.5 177 48.6
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 2.2e-27 126.3 171 49.7
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 5.0e-27 125.2 169 49.1
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 8.5e-27 124.4 177 49.7
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 7.2e-26 121.3 170 50.0
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 9.3e-26 120.9 174 49.4
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 1.0e-24 117.5 172 45.3
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 2.3e-24 116.3 168 50.0
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 2.3e-24 116.3 175 47.4
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 2.3e-24 116.3 172 44.8
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 1.5e-23 113.6 173 44.5
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 2.5e-23 112.8 178 48.9
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 3.7e-22 109.0 184 45.1
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 3.7e-22 109.0 74 78.4
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.7e-22 109.0 76 77.6
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 8.2e-22 107.8 74 77.0
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 3.1e-21 105.9 170 45.3
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 3.1e-21 105.9 72 76.4
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 5.3e-21 105.1 182 48.4
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 6.9e-21 104.8 171 44.4
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 3.4e-20 102.4 172 44.8
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 4.5e-20 102.1 172 43.6
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 7.7e-20 101.3 174 45.4
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 1.9e-18 96.7 175 40.6
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 9.4e-18 94.4 99 60.6
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 6.7e-16 88.2 188 40.4
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 3.3e-15 85.9 150 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 7.4e-15 84.7 196 31.6
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 2.2e-14 83.2 54 83.3
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 4.8e-14 82.0 169 38.5
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 2.4e-13 79.7 128 43.8
Duzib205G1338 Durio zibethinus HOM05D005135 ORTHO05D005810 4.1e-13 79.0 132 41.7
Pp3c13_17710 Physcomitrium patens HOM05D005135 ORTHO05D005810 6.9e-13 78.2 165 39.4
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 3.4e-12 75.9 137 42.3
Duzib205G1376 Durio zibethinus HOM05D005135 ORTHO05D005810 4.5e-12 75.5 102 46.1
Glyma.16G200500 Glycine max HOM05D005135 ORTHO05D005810 4.5e-12 75.5 174 39.7
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 1.9e-10 70.1 169 32.5
Cpa.g.sc4.198 Carica papaya HOM05D005135 ORTHO05D005810 1.6e-09 67.0 91 45.1


User provided reference genes

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