Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 8.0e-222 773.5 398 100.0
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 1.5e-207 726.1 399 94.2
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 9.5e-207 723.4 398 90.7
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 1.3e-187 659.8 399 83.7
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 8.1e-182 640.6 368 84.5
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 3.4e-180 635.2 402 79.6
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 1.3e-134 483.8 398 59.3
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.0e-123 447.6 399 56.6
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.4e-120 437.2 360 59.2
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 4.0e-120 435.6 346 60.7
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 6.8e-120 434.9 360 58.9
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 2.0e-119 433.3 354 59.9
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 4.1e-117 425.6 360 57.2
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 2.6e-111 406.4 394 51.5
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 7.5e-111 404.8 475 46.7
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 4.9e-110 402.1 354 53.4
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.1e-109 401.0 384 51.6
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 4.1e-109 399.1 398 51.0
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 2.7e-108 396.4 372 51.9
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 3.5e-108 396.0 336 56.8
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 4.5e-108 395.6 344 53.8
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 1.0e-107 394.4 346 55.8
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.3e-107 394.0 399 50.6
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 1.3e-107 394.0 334 54.5
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 3.9e-107 392.5 333 55.9
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 3.3e-106 389.4 362 52.8
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 2.3e-104 383.3 371 53.4
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 2.3e-104 383.3 219 86.3
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.5e-103 380.6 328 54.3
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 1.5e-103 380.6 338 53.0
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 9.8e-103 377.9 329 54.4
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 9.8e-103 377.9 359 51.5
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 1.7e-102 377.1 385 54.3
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 4.1e-101 372.5 355 51.5
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 7.0e-101 371.7 361 51.0
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 7.0e-101 371.7 330 53.3
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 1.7e-99 367.1 367 50.4
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 3.0e-99 366.3 352 53.4
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 6.6e-99 365.2 351 50.7
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 8.6e-99 364.8 354 49.7
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 8.6e-99 364.8 387 48.1
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 7.3e-98 361.7 342 52.3
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 4.7e-97 359.0 346 50.3
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 8.1e-97 358.2 368 49.7
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 1.8e-96 357.1 375 47.7
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 2.3e-96 356.7 337 53.4
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 3.1e-96 356.3 358 50.3
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 5.2e-96 355.5 379 47.5
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 5.2e-96 355.5 358 48.3
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 6.8e-96 355.1 340 49.7
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 6.8e-96 355.1 349 51.0
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 8.9e-96 354.8 369 48.0
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 8.9e-96 354.8 363 49.9
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 1.2e-95 354.4 379 47.5
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 2.6e-95 353.2 364 50.3
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 2.6e-95 353.2 379 47.0
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 7.5e-95 351.7 340 49.7
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 7.5e-95 351.7 371 49.6
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 1.3e-94 350.9 354 49.2
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 2.9e-94 349.7 352 48.3
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 4.9e-94 349.0 348 48.6
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 6.4e-94 348.6 354 50.6
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 1.9e-93 347.1 346 48.3
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 1.2e-92 344.4 339 49.6
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.5e-92 342.8 369 48.5
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 6.0e-92 342.0 353 49.6
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.3e-91 340.1 292 53.4
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 3.0e-91 339.7 327 49.2
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 6.6e-91 338.6 354 51.1
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.2e-89 334.3 369 45.3
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 1.6e-89 334.0 342 47.1
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 3.6e-89 332.8 330 47.3
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 1.4e-88 330.9 385 45.5
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 3.1e-88 329.7 316 50.3
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 4.0e-88 329.3 359 46.5
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 4.4e-87 325.9 351 51.3
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 6.4e-86 322.0 373 46.1
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 8.3e-86 321.6 457 38.5
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 1.9e-85 320.5 331 48.9
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 7.1e-85 318.5 373 45.3
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.7e-84 316.6 377 45.1
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.9e-83 312.8 388 44.3
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 1.9e-82 310.5 348 46.0
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 3.3e-82 309.7 355 45.4
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 4.3e-82 309.3 387 42.9
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 1.2e-76 291.2 294 49.7
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 2.1e-76 290.4 340 44.1
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 1.1e-72 278.1 327 43.4
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 6.6e-67 258.8 277 46.6
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.5e-66 257.7 245 50.2
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 1.6e-65 254.2 315 41.6
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 2.1e-65 253.8 394 38.3
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.7e-62 244.2 335 37.3
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.8e-56 224.2 298 43.3
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 5.3e-56 222.6 183 56.3
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 6.5e-54 215.7 247 43.7
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.4e-53 214.5 319 36.7
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.4e-53 214.5 318 36.8
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 2.5e-53 213.8 251 43.4
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 7.1e-53 212.2 200 54.5
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.1e-48 198.4 137 70.8
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.5e-47 193.0 217 44.2
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 3.8e-46 189.9 284 36.6
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.4e-45 188.0 165 57.6
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.3e-38 164.9 131 61.1
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 5.1e-35 152.9 227 37.0
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.1e-34 151.8 307 33.2
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 8.2e-33 145.6 246 32.9
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 3.3e-26 123.6 126 46.0
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 1.7e-25 121.3 204 34.3
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 4.2e-21 106.7 190 35.8
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.7e-20 104.0 250 28.4
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 4.8e-17 93.2 285 26.0
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 1.4e-16 91.7 91 44.0
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.9e-13 81.3 86 37.2
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 1.8e-11 74.7 100 38.0
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.0e-11 73.6 71 42.3
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 5.2e-11 73.2 70 41.4
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.0e-07 61.2 97 42.3
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.7e-07 60.8 97 42.3
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 3.5e-07 60.5 114 34.2
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.5e-07 60.5 97 42.3
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.7e-07 59.3 97 41.2
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 1.7e-06 58.2 51 51.0


User provided reference genes

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