Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 3.7e-86 321.6 176 100.0
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 5.5e-74 281.2 180 91.7
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.0e-71 272.7 180 90.0
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 8.3e-54 214.2 185 73.5
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 3.2e-53 212.2 183 70.5
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 9.5e-50 200.7 186 68.8
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.1e-48 197.2 185 69.2
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 7.8e-44 181.0 165 66.1
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 4.3e-42 175.3 172 62.2
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 9.5e-42 174.1 183 58.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 2.2e-38 162.9 171 57.9
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 2.9e-38 162.5 174 54.6
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 3.7e-38 162.2 182 54.9
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 6.4e-38 161.4 163 59.5
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.9e-37 159.8 183 56.3
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 3.2e-37 159.1 157 59.9
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 5.4e-37 158.3 168 59.5
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 1.6e-36 156.8 166 56.6
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 2.7e-36 156.0 182 52.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 4.6e-36 155.2 158 58.9
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 1.0e-35 154.1 158 58.9
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.7e-35 153.3 181 53.6
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 2.3e-35 152.9 164 56.7
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 3.9e-35 152.1 162 58.6
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 2.5e-34 149.4 149 57.7
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 2.5e-34 149.4 206 48.1
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.3e-34 149.1 186 51.6
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 4.3e-34 148.7 169 56.2
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 7.3e-34 147.9 174 52.3
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 9.5e-34 147.5 163 56.4
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 2.1e-33 146.4 171 53.2
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.8e-33 146.0 166 54.2
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 3.6e-33 145.6 171 51.5
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 3.6e-33 145.6 169 55.6
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 4.7e-33 145.2 159 57.2
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 8.1e-33 144.4 210 44.8
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.8e-32 143.3 153 54.9
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 2.4e-32 142.9 183 51.4
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 3.1e-32 142.5 168 51.2
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 3.1e-32 142.5 165 53.3
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.1e-32 142.5 164 53.7
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 4.0e-32 142.1 165 55.8
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 5.2e-32 141.7 208 46.2
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 6.8e-32 141.4 150 53.3
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 8.9e-32 141.0 164 54.3
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.2e-31 140.6 176 50.6
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 2.0e-31 139.8 173 48.6
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 2.0e-31 139.8 199 46.7
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.4e-31 139.0 170 52.4
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 5.8e-31 138.3 170 52.4
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 5.8e-31 138.3 170 52.4
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 5.8e-31 138.3 180 50.6
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 9.9e-31 137.5 171 48.5
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 9.9e-31 137.5 168 49.4
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.3e-30 137.1 170 48.2
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.3e-30 137.1 181 49.2
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.7e-30 136.7 173 52.0
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 2.9e-30 136.0 164 53.0
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 3.8e-30 135.6 171 51.5
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 4.9e-30 135.2 167 49.7
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 7.1e-29 131.3 141 53.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 7.1e-29 131.3 145 52.4
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 9.2e-29 131.0 181 48.6
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 9.2e-29 131.0 170 50.0
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.6e-28 130.2 164 47.6
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.6e-28 130.2 161 52.2
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.6e-28 130.2 159 52.2
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 2.1e-28 129.8 164 47.0
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 2.1e-28 129.8 211 42.7
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 2.7e-28 129.4 183 46.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 4.6e-28 128.6 178 50.6
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 6.0e-28 128.3 165 45.5
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.0e-27 127.5 177 42.4
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.0e-27 127.5 212 43.4
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 2.3e-27 126.3 161 51.6
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 2.3e-27 126.3 189 43.4
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 6.6e-27 124.8 187 46.5
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 8.7e-27 124.4 203 44.3
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.1e-26 124.0 182 47.8
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.5e-26 123.6 145 53.8
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.9e-26 123.2 181 44.2
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.3e-26 122.5 162 49.4
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.6e-26 121.7 166 46.4
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 5.6e-26 121.7 162 50.0
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 5.6e-26 121.7 197 44.7
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 5.6e-26 121.7 164 50.0
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 9.6e-26 120.9 193 44.0
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 3.1e-24 115.9 179 44.7
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-23 112.8 159 45.3
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 8.4e-22 107.8 156 46.2
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 4.2e-21 105.5 164 45.1
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 7.1e-21 104.8 165 43.6
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 1.6e-20 103.6 185 43.2
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 3.5e-20 102.4 145 46.9
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 4.6e-20 102.1 177 41.2
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 4.6e-20 102.1 177 41.2
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.5e-18 97.1 160 45.6
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 2.5e-18 96.3 170 41.2
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 5.6e-18 95.1 140 42.1
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 5.6e-18 95.1 177 37.3
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 5.6e-18 95.1 182 37.9
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 5.6e-18 95.1 148 45.9
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 9.6e-18 94.4 182 37.4
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 2.8e-17 92.8 155 41.3
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 6.2e-17 91.7 140 40.7
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.1e-16 89.4 108 50.0
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 5.8e-15 85.1 111 47.7
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.1e-13 80.9 83 61.4
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.4e-13 79.7 149 38.3
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.7e-12 76.3 44 84.1
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 2.7e-12 76.3 66 60.6
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 1.9e-10 70.1 198 35.9
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.6e-09 67.0 143 35.0
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 3.7e-09 65.9 143 35.0
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 8.1e-09 64.7 70 57.1
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.0e-08 62.4 135 34.8
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 5.3e-08 62.0 70 52.9
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.7e-06 57.0 120 35.8
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 2.9e-06 56.2 70 48.6


User provided reference genes

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