Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 5.1e-85 317.8 169 100.0
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.9e-55 219.5 169 76.3
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 9.7e-52 207.2 174 70.1
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.1e-50 203.8 173 71.1
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.7e-32 143.3 145 61.4
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 5.0e-32 141.7 81 95.1
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 2.5e-31 139.4 179 53.6
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 3.3e-31 139.0 179 50.3
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 5.6e-31 138.3 177 49.2
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.2e-30 137.1 168 50.0
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.2e-30 137.1 81 88.9
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.2e-30 137.1 174 50.0
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 4.7e-30 135.2 174 50.6
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 8.0e-30 134.4 173 46.2
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 4.0e-29 132.1 182 47.3
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 4.0e-29 132.1 176 46.6
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.2e-28 130.6 182 45.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.5e-28 130.2 182 45.6
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.0e-28 129.8 178 44.9
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.6e-28 129.4 170 50.0
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 2.6e-28 129.4 181 47.5
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 2.6e-28 129.4 178 46.6
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.4e-28 129.0 178 50.0
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 7.5e-28 127.9 174 46.0
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 9.8e-28 127.5 180 47.2
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 9.8e-28 127.5 176 47.2
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 4.9e-27 125.2 180 46.7
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 6.4e-27 124.8 180 47.2
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 8.3e-27 124.4 174 46.0
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.4e-26 123.6 175 46.9
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.4e-26 122.9 174 45.4
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 2.4e-26 122.9 176 45.5
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 5.4e-26 121.7 176 46.6
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 7.0e-26 121.3 181 42.5
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 1.6e-25 120.2 170 44.7
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.5e-25 119.0 176 43.2
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 3.5e-25 119.0 176 43.2
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 4.6e-25 118.6 172 45.3
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 4.6e-25 118.6 172 44.2
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 1.0e-24 117.5 174 43.7
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 1.0e-24 117.5 177 44.1
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 1.0e-24 117.5 174 43.7
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.3e-24 117.1 178 41.0
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 1.3e-24 117.1 175 44.6
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.9e-24 115.5 176 42.0
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 3.9e-24 115.5 178 40.4
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 3.9e-24 115.5 175 44.6
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 6.6e-24 114.8 178 40.4
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.1e-23 114.0 178 41.6
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 1.5e-23 113.6 177 41.8
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.5e-23 113.6 178 39.9
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.5e-23 112.8 180 41.7
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 4.3e-23 112.1 176 44.3
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.2e-22 110.5 180 41.1
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 4.7e-22 108.6 180 40.6
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 4.7e-22 108.6 177 42.9
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 4.7e-22 108.6 177 42.9
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.8e-21 106.7 175 41.1
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 2.3e-21 106.3 171 42.7
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 3.1e-21 105.9 175 41.7
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 8.9e-21 104.4 183 39.9
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 1.5e-20 103.6 174 43.1
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.5e-20 103.6 171 42.1
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.5e-20 103.6 170 41.8
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.6e-20 102.8 177 40.7
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 9.8e-20 100.9 174 41.4
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 9.8e-20 100.9 187 39.6
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.2e-19 99.8 174 40.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 2.2e-19 99.8 182 38.5
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 2.9e-19 99.4 175 40.0
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 2.9e-19 99.4 173 38.7
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.7e-19 99.0 181 39.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 4.9e-19 98.6 146 43.8
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 6.4e-19 98.2 174 39.7
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 6.4e-19 98.2 172 40.1
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.4e-18 97.1 174 39.1
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 1.4e-18 97.1 174 40.8
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 1.9e-18 96.7 139 46.8
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 5.4e-18 95.1 182 39.0
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 9.2e-18 94.4 187 38.5
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.1e-17 93.2 180 40.6
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.1e-17 93.2 180 40.6
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 4.6e-17 92.0 188 38.3
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 6.0e-17 91.7 172 39.0
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 6.0e-17 91.7 172 38.4
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 6.0e-17 91.7 172 38.4
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 6.0e-17 91.7 172 38.4
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.3e-16 89.7 202 35.6
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 2.3e-16 89.7 185 37.8
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 3.9e-16 89.0 187 37.4
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 3.9e-16 89.0 181 34.3
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 5.1e-16 88.6 147 45.6
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 6.6e-16 88.2 182 36.8
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 4.3e-15 85.5 129 43.4
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 7.3e-15 84.7 146 39.7
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 3.6e-14 82.4 188 36.7
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 6.2e-14 81.6 121 41.3
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 6.2e-14 81.6 217 31.8
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 2.0e-12 76.6 118 39.8
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 2.0e-12 76.6 125 39.2
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 9.9e-12 74.3 84 52.4
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 8.3e-11 71.2 146 37.7
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 3.5e-09 65.9 174 28.7
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 4.6e-09 65.5 55 63.6
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 6.0e-09 65.1 46 67.4
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 6.0e-09 65.1 38 86.8
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 5.1e-08 62.0 167 28.1
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.6e-08 61.6 166 32.5
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 8.6e-08 61.2 88 44.3
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 3.3e-07 59.3 71 53.5
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 7.3e-07 58.2 173 30.1
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 2.1e-06 56.6 169 26.6
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 8.1e-06 54.7 161 32.9


User provided reference genes

Program Settings