Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023892 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.3e-155 551.6 343 100.0
Sopen02g013030 Solanum pennellii HOM05D008149 ORTHO05D010130 5.8e-128 461.5 344 86.6
Solyc02g062070.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 6.1e-93 345.1 250 87.2
Sopen02g013010 Solanum pennellii HOM05D008149 ORTHO05D010130 9.7e-75 284.6 411 47.7
PGSC0003DMG400023889 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.1e-73 281.2 391 49.6
Sopen02g013040 Solanum pennellii HOM05D008149 ORTHO05D010130 1.9e-70 270.4 376 47.6
PGSC0003DMG400023888 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.8e-68 261.5 400 47.5
PGSC0003DMG400045200 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.2e-67 261.2 352 50.3
Sopen02g012890 Solanum pennellii HOM05D008149 ORTHO05D010130 4.1e-65 252.7 541 37.9
PGSC0003DMG400035879 Solanum tuberosum HOM05D008149 ORTHO05D010130 4.5e-64 249.2 430 42.3
Solyc02g061910.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.3e-63 246.9 353 46.7
PGSC0003DMG400037967 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.1e-62 244.6 351 47.6
Solyc02g061900.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 5.5e-62 242.3 371 45.0
CAN.G158.3 Capsicum annuum HOM05D008149 ORTHO05D010130 4.6e-48 196.1 372 38.2
Solyc02g062080.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 2.7e-40 170.2 353 38.0
Nitab4.5_0001019g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.0e-40 169.1 402 34.3
Solyc02g062060.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.3e-39 167.9 222 49.5
Sopen02g013020 Solanum pennellii HOM05D008149 ORTHO05D010130 1.3e-39 167.9 222 49.5
Solyc02g061870.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 8.6e-39 165.2 222 46.8
PGSC0003DMG400036456 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.5e-38 163.7 171 55.6
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 6.8e-36 155.6 343 34.1
Nitab4.5_0001907g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.5e-35 154.5 399 34.1
Peaxi162Scf00650g00014 Petunia axillaris HOM05D008149 ORTHO05D010130 3.2e-33 146.7 364 40.1
Peaxi162Scf00493g00439 Petunia axillaris HOM05D008149 ORTHO05D010130 9.2e-33 145.2 363 41.0
PGSC0003DMG400023887 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.2e-33 145.2 201 50.2
Solyc02g062090.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.6e-32 142.9 341 34.9
Solyc04g025760.1 Solanum lycopersicum HOM05D008149 ORTHO05D010130 1.0e-23 115.2 152 44.1
CAN.G308.65 Capsicum annuum HOM05D008149 ORTHO05D010130 1.3e-23 114.8 187 38.0
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.3e-23 114.8 165 40.0
Peaxi162Scf00066g00145 Petunia axillaris HOM05D008149 ORTHO05D010130 4.3e-22 109.8 192 39.6
Nitab4.5_0009705g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.6e-21 107.8 152 45.4
PGSC0003DMG400042869 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.6e-21 107.8 158 53.2
Peaxi162Scf01324g00211 Petunia axillaris HOM05D017006 ORTHO05D010130 3.6e-21 106.7 152 43.4
Peaxi162Scf01324g00212 Petunia axillaris HOM05D017006 ORTHO05D010130 3.6e-21 106.7 152 43.4
Peaxi162Scf01780g00003 Petunia axillaris HOM05D017006 ORTHO05D010130 3.6e-21 106.7 152 43.4
PGSC0003DMG400040065 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.1e-21 105.5 163 38.7
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 1.4e-20 104.8 150 43.3
Nitab4.5_0013476g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 1.8e-20 104.4 153 43.1
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 6.9e-20 102.4 156 39.1
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 9.0e-20 102.1 156 39.1
PGSC0003DMG400042894 Solanum tuberosum HOM05D008149 ORTHO05D010130 2.0e-19 100.9 186 38.7
Nitab4.5_0001896g0010 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.6e-19 100.5 150 40.7
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 4.4e-19 99.8 151 38.4
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 1.3e-18 98.2 152 36.2
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 1.3e-18 98.2 152 36.2
CAN.G1485.2 Capsicum annuum HOM05D008149 ORTHO05D010130 3.8e-18 96.7 116 45.7
Nitab4.5_0000608g0100 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.8e-18 96.7 155 37.4
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 5.4e-17 92.8 155 36.1
Peaxi162Scf00108g00028 Petunia axillaris HOM05D008149 ORTHO05D010130 7.1e-17 92.4 148 41.9
Peaxi162Scf00245g01014 Petunia axillaris HOM05D017006 ORTHO05D010130 2.7e-16 90.5 194 34.0
CAN.G569.40 Capsicum annuum HOM05D008149 ORTHO05D010130 2.3e-15 87.4 182 36.8
Sopen10g029870 Solanum pennellii HOM05D008149 ORTHO05D010130 1.9e-14 84.3 165 34.5
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 4.3e-14 83.2 145 37.9
CAN.G1612.2 Capsicum annuum HOM05D008149 ORTHO05D010130 8.1e-13 79.0 130 36.9
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.1e-12 78.6 149 38.3
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 1.8e-12 77.8 149 38.3
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-12 77.4 146 37.0
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 3.8e-10 70.1 147 32.0
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 4.9e-10 69.7 213 26.8
Peaxi162Scf00245g01210 Petunia axillaris HOM05D017006 ORTHO05D010130 7.1e-09 65.9 135 35.6
Peaxi162Scf00245g00118 Petunia axillaris HOM05D008149 ORTHO05D010130 3.5e-08 63.5 104 41.3
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.0e-07 62.0 149 26.8
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.8e-07 61.2 147 27.2
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.8e-07 61.2 152 28.9
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 1.8e-07 61.2 152 28.9
Eucgr.B02485 Eucalyptus grandis HOM05D000010 ORTHO05D000151 1.9e-06 57.8 146 28.8
Duzib150G0455 Durio zibethinus HOM05D000010 ORTHO05D000151 2.5e-06 57.4 170 28.2
CAN.G641.9 Capsicum annuum HOM05D008149 ORTHO05D010130 3.3e-06 57.0 74 40.5
Duzib168G0481 Durio zibethinus HOM05D000010 ORTHO05D000151 3.3e-06 57.0 173 27.7
Lj1A188T28 Lonicera japonica HOM05D000010 ORTHO05D000151 3.3e-06 57.0 221 29.0
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.6e-06 56.2 173 27.7
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 5.6e-06 56.2 151 32.5
SGA_v2.0_scaffold25G10851 Striga asiatica HOM05D007636 ORTHO05D003796 9.6e-06 55.5 149 28.2
SGA_v2.0_scaffold25G10881 Striga asiatica HOM05D007636 ORTHO05D003796 9.6e-06 55.5 149 28.2


User provided reference genes

Program Settings