Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.2e-150 535.0 266 100.0
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.9e-147 525.8 266 98.1
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.3e-147 525.0 266 98.5
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.4e-129 466.5 270 87.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.0e-127 460.3 269 86.2
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.3e-119 433.3 270 81.5
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 4.7e-101 371.7 251 75.7
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 8.3e-98 360.9 244 74.6
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 8.3e-98 360.9 257 70.0
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 8.3e-98 360.9 244 73.8
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.4e-97 360.1 264 69.3
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 4.1e-97 358.6 235 74.9
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 4.1e-97 358.6 199 84.9
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 9.2e-97 357.5 196 86.2
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.2e-96 357.1 197 86.3
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.6e-96 356.7 266 69.2
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.7e-96 355.9 234 76.5
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 2.7e-96 355.9 264 69.7
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.7e-96 355.9 197 85.8
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 3.5e-96 355.5 200 84.5
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 3.5e-96 355.5 264 68.2
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 3.5e-96 355.5 197 85.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 3.5e-96 355.5 209 80.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 3.5e-96 355.5 209 80.9
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.5e-96 355.5 194 87.6
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 7.8e-96 354.4 195 86.2
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.0e-95 354.0 199 84.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.3e-95 353.6 266 69.9
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.7e-95 353.2 264 70.1
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 5.0e-95 351.7 198 85.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 6.6e-95 351.3 265 69.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 6.6e-95 351.3 265 69.4
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 6.6e-95 351.3 243 72.4
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 6.6e-95 351.3 211 80.1
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.5e-94 350.1 264 68.2
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.9e-94 349.7 265 66.8
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.9e-94 349.7 268 67.9
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 4.3e-94 348.6 214 79.4
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 7.3e-94 347.8 248 71.8
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.6e-93 346.7 258 68.6
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.6e-93 346.7 267 69.3
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.1e-93 346.3 248 71.0
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 2.1e-93 346.3 196 82.7
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 2.8e-93 345.9 245 71.0
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 8.0e-93 344.4 268 66.8
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.4e-92 343.6 262 69.8
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 2.3e-92 342.8 266 67.7
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 4.0e-92 342.0 197 80.7
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 5.2e-92 341.7 265 66.4
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 6.8e-92 341.3 201 81.6
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 8.9e-92 340.9 263 66.5
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 8.9e-92 340.9 247 69.6
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.5e-91 340.1 194 82.5
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 7.5e-91 337.8 263 65.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.7e-90 336.7 248 69.4
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 2.2e-90 336.3 198 81.3
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.1e-89 334.0 266 64.7
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.1e-89 334.0 263 68.8
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.4e-89 333.6 198 79.8
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 2.4e-89 332.8 198 79.3
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 2.4e-89 332.8 249 68.3
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 4.1e-89 332.0 212 75.5
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 7.0e-89 331.3 261 65.9
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.6e-88 330.1 255 66.7
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.0e-88 329.7 246 69.1
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.7e-88 329.3 240 70.4
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 3.5e-88 328.9 197 78.7
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 4.6e-88 328.6 267 65.2
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 6.0e-88 328.2 267 64.4
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.3e-87 326.2 198 78.8
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.3e-87 326.2 198 78.8
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.3e-87 326.2 198 79.3
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 3.0e-87 325.9 225 69.8
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 3.0e-87 325.9 204 77.5
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.5e-86 323.6 264 63.6
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 1.5e-86 323.6 279 62.0
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 3.6e-85 318.9 242 66.5
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 4.4e-83 312.0 194 76.8
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.3e-82 310.5 196 78.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 1.7e-82 310.1 195 72.8
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 4.9e-82 308.5 194 74.2
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.4e-81 307.0 193 73.6
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.9e-81 306.6 249 63.5
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 3.0e-79 299.3 256 57.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.1e-78 297.4 245 63.3
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 7.3e-78 294.7 277 58.8
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 7.3e-78 294.7 200 69.0
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 9.5e-78 294.3 277 58.5
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.2e-77 293.9 178 78.7
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 8.1e-77 291.2 166 81.3
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.4e-73 280.4 350 50.0
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 7.1e-73 278.1 277 59.9
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 2.1e-72 276.6 166 77.7
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-72 276.2 190 67.9
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.3e-70 268.1 161 77.6
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.9e-66 255.4 197 68.0
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 3.3e-62 242.7 215 60.5
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.5e-54 217.2 196 60.7
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 5.6e-54 215.3 235 55.3
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.6e-53 213.8 175 66.9
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.7e-53 212.6 120 83.3
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 8.4e-50 201.4 121 77.7
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 3.3e-46 189.5 264 45.8
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.6e-45 187.2 96 90.6
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.1e-45 186.8 140 70.7
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 2.8e-45 186.4 212 50.5
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.6e-43 179.9 101 84.2
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.2e-41 172.9 170 57.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.8e-37 159.8 489 30.5
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.0e-35 153.7 216 44.9
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.3e-30 136.0 91 69.2
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 6.3e-29 132.1 72 81.9
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.3e-26 124.4 68 80.9
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.2e-17 92.8 96 53.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-10 69.7 45 75.6


User provided reference genes

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