Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.7e-97 359.4 183 100.0
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.7e-97 359.4 183 100.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 4.2e-93 344.7 183 94.5
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.0e-87 325.9 183 88.0
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 2.8e-81 305.4 183 83.1
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 1.5e-66 256.5 141 93.6
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.0e-66 256.1 184 71.7
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 6.4e-65 251.1 171 75.4
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 4.1e-64 248.4 171 70.8
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 4.1e-64 248.4 182 70.9
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 7.0e-64 247.7 178 71.3
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 9.2e-64 247.3 178 70.8
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.6e-63 246.5 178 69.7
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 3.5e-63 245.4 172 72.1
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 1.3e-62 243.4 182 68.1
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.7e-62 243.0 170 71.8
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 3.9e-62 241.9 166 73.5
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 5.0e-62 241.5 179 69.3
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.1e-61 240.4 170 71.2
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.1e-61 240.4 167 70.1
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.5e-61 240.0 171 70.2
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.5e-61 240.0 173 72.3
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.6e-60 236.5 171 67.8
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 3.6e-60 235.3 184 66.3
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.7e-60 235.0 187 64.2
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 4.7e-60 235.0 167 70.1
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.8e-59 233.0 184 66.3
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.8e-59 233.0 187 63.1
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 3.1e-59 232.3 171 66.7
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 3.1e-59 232.3 171 67.8
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 3.1e-59 232.3 179 64.8
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 4.0e-59 231.9 187 63.6
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 4.0e-59 231.9 187 63.6
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 4.0e-59 231.9 187 63.6
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 4.0e-59 231.9 167 69.5
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 5.2e-59 231.5 177 67.8
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 5.2e-59 231.5 184 65.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 6.8e-59 231.1 182 66.5
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 1.2e-58 230.3 186 64.0
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.5e-58 229.9 177 65.0
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 2.0e-58 229.6 186 64.0
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.6e-58 229.2 170 67.1
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 4.4e-58 228.4 170 67.1
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 5.8e-58 228.0 171 66.7
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 7.5e-58 227.6 180 64.4
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 7.5e-58 227.6 180 62.2
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 9.9e-58 227.3 167 68.3
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 9.9e-58 227.3 171 69.0
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 9.9e-58 227.3 187 61.5
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 9.9e-58 227.3 199 60.3
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.3e-57 226.9 177 66.7
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 1.7e-57 226.5 157 71.3
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.7e-57 226.5 171 66.1
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.7e-57 226.5 167 67.1
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.2e-57 226.1 176 64.2
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 3.7e-57 225.3 171 66.1
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 4.9e-57 224.9 188 61.2
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 4.9e-57 224.9 174 64.4
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 8.3e-57 224.2 181 63.0
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.4e-56 223.4 171 65.5
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 3.2e-56 222.2 181 62.4
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 3.2e-56 222.2 178 62.9
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 7.1e-56 221.1 169 64.5
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 2.1e-55 219.5 154 69.5
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.1e-55 219.5 154 69.5
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 2.7e-55 219.2 169 64.5
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.5e-55 218.8 149 71.1
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 3.5e-55 218.8 170 65.3
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.6e-55 218.4 182 60.4
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 4.6e-55 218.4 185 63.2
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 6.0e-55 218.0 178 62.4
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 7.8e-55 217.6 167 65.3
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.0e-54 217.2 172 64.0
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.3e-54 216.9 180 62.8
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.3e-54 216.1 153 69.3
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 3.9e-54 215.3 170 64.7
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 1.5e-53 213.4 171 64.3
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 1.1e-51 207.2 153 66.7
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.4e-51 206.8 153 66.7
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 4.0e-51 205.3 159 62.9
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 5.2e-51 204.9 153 66.7
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 5.2e-51 204.9 155 65.2
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 6.8e-51 204.5 153 66.0
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.2e-50 203.8 198 55.1
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.0e-50 203.0 183 61.2
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 2.6e-50 202.6 153 64.1
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 6.4e-49 198.0 153 65.4
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 8.4e-49 197.6 162 59.9
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.1e-48 197.2 146 65.8
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 1.4e-48 196.8 134 79.1
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 3.2e-48 195.7 151 70.9
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 4.1e-48 195.3 183 59.0
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 5.4e-48 194.9 153 62.7
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 1.6e-47 193.4 170 57.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.7e-47 192.6 170 60.6
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.0e-46 190.7 140 70.0
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 5.6e-45 184.9 140 65.7
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.8e-44 182.6 170 57.6
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 6.2e-44 181.4 154 61.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 2.4e-43 179.5 166 52.4
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.3e-38 162.9 137 62.8
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.5e-37 160.2 141 61.0
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.4e-35 153.7 177 48.0
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 5.3e-35 151.8 145 49.0
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 5.3e-35 151.8 166 44.6
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 8.4e-33 144.4 179 44.1
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 5.4e-32 141.7 83 81.9
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 7.1e-32 141.4 83 78.3
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 1.2e-31 140.6 83 81.9
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.3e-30 137.1 176 43.2
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.1e-29 134.0 97 68.0
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.2e-26 124.0 198 46.0
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 8.4e-25 117.9 77 70.1
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 7.1e-24 114.8 226 40.7
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 7.4e-21 104.8 70 71.4
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 3.7e-20 102.4 87 59.8
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 4.8e-20 102.1 91 58.2
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.3e-17 94.0 73 61.6
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.4e-16 90.5 87 54.0
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.2e-16 89.4 57 86.0
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 2.5e-13 79.7 63 61.9
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 4.1e-11 72.4 61 57.4
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 9.0e-11 71.2 79 50.6
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 3.6e-07 59.3 63 49.2
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 1.0e-06 57.8 50 58.0


User provided reference genes

Program Settings