Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023213 Solanum tuberosum HOM05D000654 ORTHO05D002330 6.6e-61 237.3 127 100.0
Solyc11g012860.3 Solanum lycopersicum HOM05D000654 ORTHO05D002330 9.0e-34 147.1 145 62.1
Sopen11g007600 Solanum pennellii HOM05D000654 ORTHO05D002330 9.0e-34 147.1 145 62.1
PGSC0003DMG400000896 Solanum tuberosum HOM05D000654 ORTHO05D002330 3.4e-33 145.2 145 61.4
Nitab4.5_0001996g0070 Nicotiana tabacum HOM05D000654 ORTHO05D002330 4.9e-32 141.4 147 58.5
Nitab4.5_0001803g0040 Nicotiana tabacum HOM05D000654 ORTHO05D002330 6.0e-30 134.4 144 56.9
Solyc06g060320.4 Solanum lycopersicum HOM05D000654 ORTHO05D002330 4.1e-18 95.1 161 42.2
Dinv27310 Davidia involucrata HOM05D000654 ORTHO05D002330 1.7e-16 89.7 161 41.6
Thecc.08G125700 Theobroma cacao HOM05D000654 ORTHO05D002330 2.3e-13 79.3 161 40.4
TAR628G0848 Trochodendron aralioides HOM05D000654 ORTHO05D002330 2.3e-13 79.3 161 39.1
CSS0033667 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 4.3e-12 75.1 146 40.4
TAR381G0379 Trochodendron aralioides HOM05D000654 ORTHO05D002330 7.4e-12 74.3 161 36.6
Cpa.g.sc64.89 Carica papaya HOM05D000654 ORTHO05D002330 1.3e-11 73.6 159 34.0
MBI09_g42045_MAGBIO Magnolia biondii HOM05D000654 ORTHO05D002330 1.3e-11 73.6 161 34.2
TAR376G0691 Trochodendron aralioides HOM05D000654 ORTHO05D002330 1.3e-11 73.6 161 36.6
Gohir.A06G044900 Gossypium hirsutum HOM05D000654 ORTHO05D002330 2.2e-11 72.8 156 37.2
Ca_12627_v3 Cicer arietinum L. HOM05D000654 ORTHO05D002330 2.8e-11 72.4 157 37.6
COL.COLO4_08076 Corchorus olitorius HOM05D000654 ORTHO05D002330 4.8e-11 71.6 161 36.6
TAR625G0483 Trochodendron aralioides HOM05D000654 ORTHO05D002330 4.8e-11 71.6 161 36.0
Duzib187G1539 Durio zibethinus HOM05D000654 ORTHO05D002330 6.3e-11 71.2 161 36.0
Gorai.010G050400 Gossypium raimondii HOM05D000654 ORTHO05D002330 6.3e-11 71.2 158 38.0
CSS0002986 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 8.2e-11 70.9 160 35.6
Actinidia02621 Actinidia chinensis HOM05D000654 ORTHO05D002330 1.1e-10 70.5 140 42.1
Aqoxy6G00220 Aquilegia oxysepala HOM05D000654 ORTHO05D002330 1.1e-10 70.5 161 36.0
CSS0013859 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 1.1e-10 70.5 134 38.8
Dinv40960 Davidia involucrata HOM05D000654 ORTHO05D002330 2.4e-10 69.3 161 35.4
Duzib116G0257 Durio zibethinus HOM05D000654 ORTHO05D002330 3.1e-10 68.9 156 36.5
QL09p034567 Quercus lobata HOM05D000654 ORTHO05D002330 4.1e-10 68.6 158 35.4
Peaxi162Scf00051g00107 Petunia axillaris HOM05D000654 ORTHO05D002330 5.3e-10 68.2 148 39.9
MSTRG.1439 Avicennia marina HOM05D000654 ORTHO05D002330 6.9e-10 67.8 157 32.5
CiPaw.05G221200 Carya illinoinensis HOM05D000654 ORTHO05D002330 1.2e-09 67.0 158 35.4
Glyma.13G078500 Glycine max HOM05D000654 ORTHO05D002330 1.2e-09 67.0 158 34.2
Lalb_Chr17g0343731 Lupinus albus HOM05D000654 ORTHO05D002330 1.2e-09 67.0 151 36.4
TPR.G25803 Trifolium pratense HOM05D000654 ORTHO05D002330 1.2e-09 67.0 156 33.3
arahy.Tifrunner.gnm1.ann1.RFHL3Y Arachis hypogaea HOM05D000654 ORTHO05D002330 1.5e-09 66.6 155 31.0
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 2.0e-09 66.2 158 34.2
Psat6g040560 Pisum sativum HOM05D000654 ORTHO05D002330 2.6e-09 65.9 160 35.6
SalBow7G1808 Salvia bowleyana HOM05D000654 ORTHO05D002330 3.4e-09 65.5 147 32.7
Lalb_Chr04g0253441 Lupinus albus HOM05D000654 ORTHO05D002330 4.5e-09 65.1 159 34.0
Potri.005G178100 Populus trichocarpa HOM05D000654 ORTHO05D002330 4.5e-09 65.1 155 34.2
Gohir.D06G045400 Gossypium hirsutum HOM05D000654 ORTHO05D002330 5.9e-09 64.7 151 36.4
Atru.chr4.1113 Acer truncatum HOM05D000654 ORTHO05D002330 7.7e-09 64.3 93 43.0
Sabra05G0134500 Salix brachista HOM05D000654 ORTHO05D002330 7.7e-09 64.3 155 32.3
Duzib093G0185 Durio zibethinus HOM05D000654 ORTHO05D002330 1.0e-08 63.9 158 36.1
Glyma.14G150900 Glycine max HOM05D000654 ORTHO05D002330 1.0e-08 63.9 158 33.5
Lalb_Chr07g0184181 Lupinus albus HOM05D000654 ORTHO05D002330 1.0e-08 63.9 159 34.0
Medtr1g030010 Medicago truncatula HOM05D000654 ORTHO05D002330 1.0e-08 63.9 160 34.4
MSTRG.25380 Avicennia marina HOM05D000654 ORTHO05D002330 1.3e-08 63.5 159 33.3
HanXRQChr05g0151081 Helianthus annuus HOM05D000654 ORTHO05D002330 1.3e-08 63.5 155 36.1
Sabra02G0065400 Salix brachista HOM05D000654 ORTHO05D002330 1.3e-08 63.5 152 30.9
MD15G1348000 Malus domestica HOM05D000654 ORTHO05D002330 1.7e-08 63.2 159 31.4
Nn5g28299 Nelumbo nucifera HOM05D000654 ORTHO05D002330 2.2e-08 62.8 159 34.6
Potri.002G083400 Populus trichocarpa HOM05D000654 ORTHO05D002330 2.2e-08 62.8 154 32.5
Sopen06g020440 Solanum pennellii HOM05D000654 ORTHO05D002330 2.9e-08 62.4 134 36.6
Thecc.01G142000 Theobroma cacao HOM05D000654 ORTHO05D002330 2.9e-08 62.4 158 36.1
Manes.18G077439 Manihot esculenta HOM05D000654 ORTHO05D002330 6.5e-08 61.2 156 34.6
arahy.Tifrunner.gnm1.ann1.76W0IE Arachis hypogaea HOM05D000654 ORTHO05D002330 8.5e-08 60.8 157 34.4
CiPaw.06G031100 Carya illinoinensis HOM05D000654 ORTHO05D002330 1.1e-07 60.5 160 33.1
QL10p040142 Quercus lobata HOM05D000654 ORTHO05D002330 1.1e-07 60.5 158 32.9
arahy.Tifrunner.gnm1.ann1.7H0H8R Arachis hypogaea HOM05D000654 ORTHO05D002330 1.4e-07 60.1 157 34.4
Eucgr.F04348 Eucalyptus grandis HOM05D000654 ORTHO05D002330 1.4e-07 60.1 153 35.3
arahy.Tifrunner.gnm1.ann1.YG0QBR Arachis hypogaea HOM05D000654 ORTHO05D002330 1.9e-07 59.7 158 31.6
CANSAT25G0926 Cannabis sativa HOM05D000654 ORTHO05D002330 1.9e-07 59.7 157 33.1
Lalb_Chr10g0101661 Lupinus albus HOM05D000654 ORTHO05D002330 1.9e-07 59.7 143 36.4
MD08G1162500 Malus domestica HOM05D000654 ORTHO05D002330 2.5e-07 59.3 150 32.0
Manes.02G163500 Manihot esculenta HOM05D000654 ORTHO05D002330 2.5e-07 59.3 100 42.0
Manes.13G079600 Manihot esculenta HOM05D000654 ORTHO05D002330 2.5e-07 59.3 161 30.4
Nitab4.5_0004044g0010 Nicotiana tabacum HOM05D000654 ORTHO05D002330 2.5e-07 59.3 112 42.0
DCAR_014389 Daucus carota HOM05D000654 ORTHO05D002330 4.2e-07 58.5 87 42.5
Prupe.4G281900 Prunus persica HOM05D000654 ORTHO05D002330 4.2e-07 58.5 155 32.9
MBI16_g07662_MAGBIO Magnolia biondii HOM05D000654 ORTHO05D002330 7.2e-07 57.8 159 31.4
Prupe.1G495600 Prunus persica HOM05D000654 ORTHO05D002330 9.4e-07 57.4 151 31.1
TWI75G0583 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 9.4e-07 57.4 158 31.6
Atru.chr13.1463 Acer truncatum HOM05D000654 ORTHO05D002330 1.2e-06 57.0 149 30.9
Atru.chr13.1485 Acer truncatum HOM05D000654 ORTHO05D002330 1.2e-06 57.0 149 30.9
Dinv07217 Davidia involucrata HOM05D000654 ORTHO05D002330 1.6e-06 56.6 104 38.5
Glyma.04G207700 Glycine max HOM05D000654 ORTHO05D002330 1.6e-06 56.6 159 35.2
Gohir.D10G107200 Gossypium hirsutum HOM05D000654 ORTHO05D002330 1.6e-06 56.6 161 31.7
Gohir.A10G067800 Gossypium hirsutum HOM05D000654 ORTHO05D002330 2.1e-06 56.2 161 31.7
Gorai.011G117600 Gossypium raimondii HOM05D000654 ORTHO05D002330 2.1e-06 56.2 161 31.7
Hma1.2p1_1519F.1_g288570 Hydrangea macrophylla HOM05D000654 ORTHO05D002330 2.1e-06 56.2 162 34.0
RcHm_v2.0_Chr6g0295851 Rosa chinensis HOM05D000654 ORTHO05D002330 2.1e-06 56.2 152 32.9
arahy.Tifrunner.gnm1.ann1.H5ZVLQ Arachis hypogaea HOM05D000654 ORTHO05D002330 2.7e-06 55.8 158 31.0
Gohir.D05G237500 Gossypium hirsutum HOM05D000654 ORTHO05D002330 2.7e-06 55.8 148 33.8
Gorai.009G245900 Gossypium raimondii HOM05D000654 ORTHO05D002330 2.7e-06 55.8 148 33.8
Lj1g0018918 Lotus japonicus HOM05D000654 ORTHO05D002330 2.7e-06 55.8 133 34.6
Phvul.008G161100 Phaseolus vulgaris HOM05D000654 ORTHO05D002330 3.6e-06 55.5 153 31.4
SalBow7G0427 Salvia bowleyana HOM05D000654 ORTHO05D002330 3.6e-06 55.5 155 30.3
CiPaw.04G077200 Carya illinoinensis HOM05D000654 ORTHO05D002330 4.7e-06 55.1 93 43.0
CDE09G0315 Ceratophyllum demersum HOM05D000654 ORTHO05D002330 4.7e-06 55.1 158 29.7
DCAR_030969 Daucus carota HOM05D000654 ORTHO05D002330 4.7e-06 55.1 152 33.6
FvH4_2g26980 Fragaria vesca HOM05D000654 ORTHO05D002330 4.7e-06 55.1 150 31.3
FAN15G0872 Fragaria x ananassa HOM05D000654 ORTHO05D002330 4.7e-06 55.1 150 31.3
FAN20G2000 Fragaria x ananassa HOM05D000654 ORTHO05D002330 4.7e-06 55.1 150 31.3
FAN24G3269 Fragaria x ananassa HOM05D000654 ORTHO05D002330 4.7e-06 55.1 150 31.3
TWI79G0039 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 4.7e-06 55.1 156 30.8
arahy.Tifrunner.gnm1.ann1.B1CQIQ Arachis hypogaea HOM05D000654 ORTHO05D002330 6.1e-06 54.7 157 33.1
CDE07G0323 Ceratophyllum demersum HOM05D000654 ORTHO05D002330 6.1e-06 54.7 158 29.7
Potri.007G098500 Populus trichocarpa HOM05D000654 ORTHO05D002330 6.1e-06 54.7 161 30.4
Rhsim10G0129600 Rhododendron simsii HOM05D000654 ORTHO05D002330 6.1e-06 54.7 138 36.2
arahy.Tifrunner.gnm1.ann1.N7WRT5 Arachis hypogaea HOM05D000654 ORTHO05D002330 7.9e-06 54.3 157 32.5
FAN23G0506 Fragaria x ananassa HOM05D000654 ORTHO05D002330 7.9e-06 54.3 132 34.8


User provided reference genes

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