Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023178 Solanum tuberosum HOM05D009591 ORTHO05D000101 9.9e-94 346.7 162 100.0
PGSC0003DMG400026777 Solanum tuberosum HOM05D009591 ORTHO05D000101 1.4e-76 289.7 145 92.4
PGSC0003DMG400047266 Solanum tuberosum HOM05D009591 ORTHO05D000101 1.3e-61 240.0 146 79.5
PGSC0003DMG400041967 Solanum tuberosum HOM05D009591 ORTHO05D000101 4.1e-55 218.4 156 69.9
Nitab4.5_0001041g0030 Nicotiana tabacum HOM05D009591 ORTHO05D000101 9.1e-31 137.5 152 49.3
PGSC0003DMG400025675 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.4e-26 123.6 155 45.8
CAN.G158.32 Capsicum annuum HOM05D000171 ORTHO05D000101 3.7e-24 115.5 122 52.5
PGSC0003DMG400045426 Solanum tuberosum HOM05D000171 ORTHO05D000101 5.3e-23 111.7 151 41.7
PGSC0003DMG400036653 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.0e-21 107.5 145 41.4
Peaxi162Scf00180g00130 Petunia axillaris HOM05D009591 ORTHO05D000101 2.2e-21 106.3 132 44.7
PGSC0003DMG400025676 Solanum tuberosum HOM05D000171 ORTHO05D000101 8.5e-21 104.4 108 51.9
PGSC0003DMG400041815 Solanum tuberosum HOM05D000171 ORTHO05D000101 2.5e-20 102.8 133 42.9
CAN.G1333.14 Capsicum annuum HOM05D022910 ORTHO05D010076 2.7e-19 99.4 159 40.9
CAN.G371.108 Capsicum annuum HOM05D009591 ORTHO05D000101 1.0e-18 97.4 169 36.7
CAN.G1800.2 Capsicum annuum HOM05D009591 ORTHO05D000101 1.4e-18 97.1 139 43.9
PGSC0003DMG400043442 Solanum tuberosum HOM05D000171 ORTHO05D000101 2.3e-18 96.3 149 39.6
PGSC0003DMG400038445 Solanum tuberosum HOM05D000171 ORTHO05D000101 9.8e-17 90.9 158 39.2
PGSC0003DMG400001445 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.3e-16 90.5 146 34.9
CAN.G184.55 Capsicum annuum HOM05D009591 ORTHO05D000101 1.7e-16 90.1 164 34.8
PGSC0003DMG400047325 Solanum tuberosum HOM05D000171 ORTHO05D000101 8.3e-16 87.8 135 40.7
CAN.G128.136 Capsicum annuum HOM05D000171 ORTHO05D000101 1.4e-15 87.0 136 39.7
PGSC0003DMG400041680 Solanum tuberosum HOM05D009591 ORTHO05D000101 4.1e-15 85.5 121 43.0
Dinv27418 Davidia involucrata HOM05D000171 ORTHO05D000101 1.2e-14 84.0 152 32.9
Peaxi162Scf00811g00221 Petunia axillaris HOM05D000171 ORTHO05D000101 3.5e-14 82.4 155 32.9
PGSC0003DMG400017452 Solanum tuberosum HOM05D000312 ORTHO05D000221 7.7e-14 81.3 114 41.2
Nitab4.5_0005154g0100 Nicotiana tabacum HOM05D009591 ORTHO05D000101 1.3e-13 80.5 118 42.4
PGSC0003DMG400046934 Solanum tuberosum HOM05D009591 ORTHO05D000101 3.8e-13 79.0 68 52.9
Nitab4.5_0005154g0110 Nicotiana tabacum HOM05D009591 ORTHO05D000101 5.5e-12 75.1 92 53.3
BcaB08g36406 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-11 73.6 144 35.4
C09p53810 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-11 72.8 143 35.7
PGSC0003DMG400038214 Solanum tuberosum HOM05D009591 ORTHO05D000101 2.7e-11 72.8 106 38.7
Thhalv10009437m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.8e-10 68.2 115 37.4
Thhalv10009646m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-09 67.4 151 34.4
Nitab4.5_0000471g0120 Nicotiana tabacum HOM05D009591 ORTHO05D000101 2.0e-09 66.6 113 37.2
AT3G10240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.8e-09 64.3 157 30.6
CARHR190780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.7e-08 63.5 153 28.8
A03p10530 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-08 62.4 150 28.0
BraA03t10365Z Brassica rapa HOM05D000171 ORTHO05D000101 3.7e-08 62.4 150 28.0
BcaB01g04692 Brassica carinata HOM05D000171 ORTHO05D000101 6.3e-08 61.6 154 29.9
BNapus_Darmor_BZH_scaffold_38p00400 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-08 61.6 154 30.5
BolC6t39130H Brassica oleracea HOM05D000171 ORTHO05D000101 6.3e-08 61.6 116 34.5
BraA08t32262Z Brassica rapa HOM05D000171 ORTHO05D000101 6.3e-08 61.6 159 30.2
Carub.0007s2700 Capsella rubella HOM05D000171 ORTHO05D000101 6.3e-08 61.6 154 27.9
CARHR190800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-08 61.6 157 29.3
BcaB08g36954 Brassica carinata HOM05D000171 ORTHO05D000101 8.3e-08 61.2 141 31.9
C03p90650 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-07 60.8 159 30.2
BolC3t21387H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-07 60.8 159 30.2
Thhalv10009427m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-07 60.8 105 38.1
Thhalv10005381m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.4e-07 59.7 154 29.9
Sp1g34800 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.4e-07 59.7 155 29.0
BcaB03g13759 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-07 59.3 147 30.6
A08p02150 Brassica napus HOM05D000171 ORTHO05D000101 4.1e-07 58.9 127 34.6
CAN.G1058.31 Capsicum annuum HOM05D000171 ORTHO05D000101 4.1e-07 58.9 87 41.4
Medtr1g055375 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-07 58.9 159 28.3
BcaB01g03312 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-07 58.5 166 25.9
A02p14060 Brassica napus HOM05D000171 ORTHO05D000101 5.4e-07 58.5 150 31.3
BraA02t06469Z Brassica rapa HOM05D000171 ORTHO05D000101 5.4e-07 58.5 150 31.3
Thhalv10009316m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.4e-07 58.5 114 34.2
AL4G11220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.0e-07 58.2 151 29.1
BcaC01g01326 Brassica carinata HOM05D000171 ORTHO05D000101 9.2e-07 57.8 127 34.6
BolC3t18120H Brassica oleracea HOM05D000171 ORTHO05D000101 9.2e-07 57.8 141 31.2
Thhalv10009543m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 9.2e-07 57.8 125 32.8
Thhalv10009314m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-06 57.4 114 35.1
AL1G54580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-06 57.0 144 31.9
AT1G46984 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.6e-06 57.0 126 32.5
BcaC03g13916 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-06 57.0 148 29.1
C02p11270 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-06 57.0 148 29.1
Carub.0002s0517 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-06 57.0 114 34.2
Carub.0003s0941 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-06 57.0 137 32.8
Carub.0003s2443 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-06 57.0 133 27.8
AT2G32470 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.7e-06 56.2 130 30.0
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-06 56.2 161 25.5
CARHR049440 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.5e-06 55.8 147 26.5
PSO675G8986 Papaver somniferum HOM05D000007 ORTHO05D000676 3.5e-06 55.8 89 31.5
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 4.5e-06 55.5 150 26.0
Thhalv10009419m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.5e-06 55.5 144 29.9
BolC2t08420H Brassica oleracea HOM05D000171 ORTHO05D000101 5.9e-06 55.1 152 29.6
AT2G40925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.7e-06 54.7 143 26.6
A10p01120 Brassica napus HOM05D000171 ORTHO05D000101 7.7e-06 54.7 111 36.0
C05p01150 Brassica napus HOM05D000171 ORTHO05D000101 7.7e-06 54.7 111 36.0
BolC5t28897H Brassica oleracea HOM05D000171 ORTHO05D000101 7.7e-06 54.7 111 36.0
BraA01t02190Z Brassica rapa HOM05D000171 ORTHO05D000101 7.7e-06 54.7 117 31.6


User provided reference genes

Program Settings