Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 2.3e-59 231.9 107 100.0
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 1.5e-58 229.2 107 97.2
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.0e-58 228.8 107 97.2
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.6e-58 228.4 107 96.3
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 3.9e-54 214.5 107 91.6
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 2.1e-52 208.8 96 95.8
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 2.8e-52 208.4 96 94.8
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 1.1e-51 206.5 96 95.8
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 1.8e-51 205.7 107 88.8
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 1.8e-51 205.7 107 88.8
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 2.0e-50 202.2 106 83.0
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 5.8e-50 200.7 103 86.4
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 84.1
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 84.1
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 8.3e-49 196.8 108 82.4
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 1.4e-48 196.1 99 86.9
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.9e-48 195.7 108 81.5
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 2.4e-48 195.3 108 81.5
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 4.1e-48 194.5 107 82.2
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 5.4e-48 194.1 108 83.3
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 5.4e-48 194.1 107 82.2
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 7.1e-48 193.7 108 80.6
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 9.2e-48 193.4 107 83.2
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 9.2e-48 193.4 107 83.2
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 1.6e-47 192.6 99 84.8
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 2.1e-47 192.2 107 81.3
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 2.7e-47 191.8 108 81.5
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 3.5e-47 191.4 99 82.8
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 6.0e-47 190.7 108 82.4
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 7.8e-47 190.3 108 81.5
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 7.8e-47 190.3 108 81.5
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 7.8e-47 190.3 107 79.4
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 1.0e-46 189.9 108 82.4
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 1.7e-46 189.1 108 82.4
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 3.0e-46 188.3 108 81.5
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 3.9e-46 188.0 100 83.0
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 3.9e-46 188.0 100 83.0
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 5.1e-46 187.6 95 86.3
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 5.1e-46 187.6 106 81.1
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 1.1e-45 186.4 108 80.6
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.9e-45 185.7 107 80.4
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 1.9e-45 185.7 101 80.2
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 2.5e-45 185.3 108 78.7
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 3.3e-45 184.9 104 78.8
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 3.3e-45 184.9 104 78.8
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 3.3e-45 184.9 105 79.0
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 5.6e-45 184.1 107 77.6
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 80.6
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 80.6
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 80.6
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 80.6
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 108 80.6
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 5.6e-45 184.1 95 84.2
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 76.9
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 76.9
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 79.6
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 7.3e-45 183.7 103 81.6
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 79.6
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 9.5e-45 183.3 108 80.6
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 9.5e-45 183.3 104 79.8
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 9.5e-45 183.3 102 83.3
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.2e-44 183.0 108 77.8
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 1.2e-44 183.0 108 80.6
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 1.2e-44 183.0 108 76.9
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.2e-44 183.0 108 78.7
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 1.2e-44 183.0 103 81.6
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 1.2e-44 183.0 108 79.6
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 1.6e-44 182.6 108 77.8
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.1e-44 182.2 109 78.0
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 77.8
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 78.7
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 78.7
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 76.9
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 76.9
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 2.8e-44 181.8 108 77.8
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 3.6e-44 181.4 108 76.9
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 3.6e-44 181.4 107 79.4
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 3.6e-44 181.4 108 77.8
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 3.6e-44 181.4 108 79.6
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 4.7e-44 181.0 108 76.9
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 4.7e-44 181.0 108 76.9
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 4.7e-44 181.0 108 76.9
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 4.7e-44 181.0 108 76.9
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 6.2e-44 180.6 107 77.6
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 8.1e-44 180.3 108 79.6
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 8.1e-44 180.3 95 83.2
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 8.1e-44 180.3 95 83.2
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 8.1e-44 180.3 97 83.5
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 8.1e-44 180.3 108 77.8
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.1e-43 179.9 108 75.0
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 1.1e-43 179.9 108 76.9
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 1.1e-43 179.9 108 76.9
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 1.4e-43 179.5 99 80.8
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 2.4e-43 178.7 96 82.3
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 3.1e-43 178.3 108 75.9
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 3.1e-43 178.3 108 75.9
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 3.1e-43 178.3 99 77.8
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 3.1e-43 178.3 100 82.0
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 4.0e-43 177.9 108 76.9
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 4.0e-43 177.9 108 76.9
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 4.0e-43 177.9 105 76.2
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 5.2e-43 177.6 108 75.9
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 5.2e-43 177.6 108 75.0
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 76.6
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 6.8e-43 177.2 106 77.4
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 6.8e-43 177.2 108 75.0
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 8.9e-43 176.8 108 75.9
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 8.9e-43 176.8 108 75.9
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 8.9e-43 176.8 108 75.9
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 1.5e-42 176.0 101 79.2
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 2.0e-42 175.6 96 82.3
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 2.6e-42 175.3 108 75.9
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 2.6e-42 175.3 97 80.4
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 4.4e-42 174.5 99 80.8
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 4.4e-42 174.5 106 76.4
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 7.6e-42 173.7 95 81.1
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 7.6e-42 173.7 107 72.0
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 7.6e-42 173.7 97 80.4
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 7.6e-42 173.7 103 76.7
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 3.8e-41 171.4 97 77.3
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.8e-41 171.4 98 80.6
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 8.4e-41 170.2 103 75.7
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 1.4e-40 169.5 97 78.4
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.4e-40 168.7 90 84.4
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 3.2e-40 168.3 103 74.8
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 3.2e-40 168.3 98 77.6
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 4.7e-36 154.5 94 74.5
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 4.9e-33 144.4 84 77.4
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 6.4e-33 144.1 78 84.6
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 6.0e-31 137.5 71 84.5
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 2.3e-30 135.6 68 89.7
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 8.7e-30 133.7 67 88.1
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 1.4e-27 126.3 87 63.2
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 1.4e-27 126.3 88 63.6
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 2.4e-27 125.6 87 63.2
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 9.0e-27 123.6 89 61.8
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 3.4e-26 121.7 74 77.0
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 4.9e-25 117.9 74 78.4
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 1.6e-23 112.8 89 59.6
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 7.9e-23 110.5 84 56.0
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.3e-22 109.8 65 75.4
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 5.6e-21 104.4 59 78.0
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 5.3e-19 97.8 100 52.0
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 2.4e-16 89.0 73 50.7
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 4.2e-16 88.2 76 59.2
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.0e-14 83.6 48 77.1
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 3.9e-14 81.6 50 76.0
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 1.6e-12 76.3 36 94.4
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 2.1e-12 75.9 54 68.5
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 2.6e-10 68.9 36 86.1
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.4e-08 63.2 86 39.5


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