Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400023008 Solanum tuberosum HOM05D005268 ORTHO05D000493 0.0e+00 1152.5 575 100.0
PGSC0003DMG400023005 Solanum tuberosum HOM05D005268 ORTHO05D000493 3.9e-145 519.2 588 55.1
Peaxi162Scf00066g01521 Petunia axillaris HOM05D005268 ORTHO05D000493 1.3e-84 318.2 958 30.8
PGSC0003DMG400023006 Solanum tuberosum HOM05D005268 ORTHO05D000493 2.1e-77 294.3 274 62.0
Peaxi162Scf00360g00618 Petunia axillaris HOM05D005268 ORTHO05D000493 1.9e-75 287.7 681 34.2
Peaxi162Scf00168g00921 Petunia axillaris HOM05D005268 ORTHO05D000493 4.3e-75 286.6 659 34.1
Nitab4.5_0001915g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.5e-72 276.6 389 46.3
Nitab4.5_0001915g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.4e-70 269.6 673 32.5
Nitab4.5_0001915g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.0e-69 266.2 658 33.6
Nitab4.5_0002580g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 6.7e-68 262.7 641 34.0
Peaxi162Scf00066g00161 Petunia axillaris HOM05D005268 ORTHO05D000493 9.6e-67 258.8 601 35.8
Peaxi162Scf00168g00113 Petunia axillaris HOM05D005268 ORTHO05D000493 1.8e-65 254.6 578 35.8
Peaxi162Scf00168g01739 Petunia axillaris HOM05D005268 ORTHO05D000493 3.1e-65 253.8 592 34.3
Peaxi162Scf00338g00629 Petunia axillaris HOM05D005268 ORTHO05D000493 9.0e-65 252.3 947 27.0
Peaxi162Scf00066g01220 Petunia axillaris HOM05D005268 ORTHO05D000493 3.4e-64 250.4 692 31.4
Nitab4.5_0002580g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.8e-64 249.6 882 29.4
Sopen01g027240 Solanum pennellii HOM05D005268 ORTHO05D000493 2.4e-62 244.2 642 31.9
Nitab4.5_0007952g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.2e-62 243.4 614 33.2
Peaxi162Scf00168g01738 Petunia axillaris HOM05D005268 ORTHO05D000493 2.1e-61 241.1 622 34.2
Solyc01g065840.4 Solanum lycopersicum HOM05D005268 ORTHO05D000493 6.0e-61 239.6 642 31.9
Peaxi162Scf00756g00431 Petunia axillaris HOM05D005268 ORTHO05D000493 7.9e-61 239.2 606 33.7
Peaxi162Scf00756g00433 Petunia axillaris HOM05D005268 ORTHO05D000493 1.3e-60 238.4 620 33.1
Peaxi162Scf00066g01320 Petunia axillaris HOM05D005268 ORTHO05D000493 2.3e-60 237.7 647 32.9
Nitab4.5_0003375g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.1e-60 236.5 655 33.0
Peaxi162Scf00066g01416 Petunia axillaris HOM05D005268 ORTHO05D000493 3.3e-59 233.8 639 31.8
Peaxi162Scf00168g00719 Petunia axillaris HOM05D005268 ORTHO05D000493 3.3e-59 233.8 591 32.7
Nitab4.5_0004040g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 9.6e-59 232.3 272 50.0
Nitab4.5_0001915g0080 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.1e-58 229.2 613 33.8
Solyc01g065740.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 8.1e-58 229.2 647 31.4
PGSC0003DMG400021962 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.7e-55 221.5 592 34.1
Peaxi162Scf00168g01740 Petunia axillaris HOM05D005268 ORTHO05D000493 2.5e-54 217.6 276 48.2
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 1.0e-52 212.2 889 26.7
Nitab4.5_0003030g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.8e-52 211.5 617 30.6
Nitab4.5_0000830g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.3e-52 211.1 568 32.0
Solyc04g072360.2 Solanum lycopersicum HOM05D005268 ORTHO05D000493 2.3e-52 211.1 582 32.5
Nitab4.5_0001915g0090 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.1e-50 204.5 457 35.9
Peaxi162Scf00168g01126 Petunia axillaris HOM05D005268 ORTHO05D000493 2.1e-50 204.5 665 28.6
Nitab4.5_0002580g0060 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.7e-50 203.8 660 29.7
PGSC0003DMG400037653 Solanum tuberosum HOM05D001396 ORTHO05D000493 2.4e-49 201.1 531 32.0
Peaxi162Scf01070g00031 Petunia axillaris HOM05D005268 ORTHO05D000493 1.5e-48 198.4 572 31.3
Peaxi162Scf00168g01712 Petunia axillaris HOM05D005268 ORTHO05D000493 7.6e-48 196.1 640 30.6
Peaxi162Scf00168g00922 Petunia axillaris HOM05D005268 ORTHO05D000493 8.5e-47 192.6 628 29.6
Nitab4.5_0010157g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.7e-45 187.6 564 31.2
Sopen04g028510 Solanum pennellii HOM05D005268 ORTHO05D000493 3.9e-44 183.7 412 34.2
Nitab4.5_0005678g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.1e-44 183.3 244 44.3
Nitab4.5_0001915g0070 Nicotiana tabacum HOM05D005268 ORTHO05D000493 4.3e-43 180.3 234 44.9
Peaxi162Scf01070g00030 Petunia axillaris HOM05D001396 ORTHO05D000493 4.8e-42 176.8 935 24.7
Nitab4.5_0001915g0060 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.2e-42 176.0 288 40.3
Sopen04g025810 Solanum pennellii HOM05D001396 ORTHO05D000493 2.4e-41 174.5 584 30.1
Solyc04g057950.2 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.1e-41 173.7 589 29.9
Nitab4.5_0011431g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 9.1e-41 172.6 568 30.8
Sopen01g027170 Solanum pennellii HOM05D005268 ORTHO05D000493 5.9e-40 169.9 571 29.4
CAN.G1026.2 Capsicum annuum HOM05D005268 ORTHO05D000493 1.9e-38 164.9 362 34.8
Peaxi162Scf01070g00124 Petunia axillaris HOM05D005268 ORTHO05D000493 3.2e-38 164.1 599 28.9
CAN.G726.13 Capsicum annuum HOM05D005268 ORTHO05D000493 5.5e-38 163.3 236 44.5
Nitab4.5_0002719g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.1e-35 155.6 238 39.9
Peaxi162Scf00136g02210 Petunia axillaris HOM05D005268 ORTHO05D000493 9.7e-35 152.5 228 45.2
Sopen04g028530 Solanum pennellii HOM05D000002 ORTHO05D000047 2.8e-34 151.0 212 45.3
Peaxi162Scf00338g00627 Petunia axillaris HOM05D001396 ORTHO05D000493 3.1e-33 147.5 453 30.9
Nitab4.5_0005678g0050 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.3e-33 146.7 184 45.1
PGSC0003DMG400023007 Solanum tuberosum HOM05D000004 ORTHO05D000002 6.9e-33 146.4 128 57.0
CAN.G726.16 Capsicum annuum HOM05D005268 ORTHO05D000493 4.5e-32 143.7 494 28.1
Nitab4.5_0012602g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.9e-32 143.3 205 45.4
Nitab4.5_0002580g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.0e-31 142.5 249 37.8
Nitab4.5_0002580g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.0e-31 142.5 219 41.1
Nitab4.5_0001915g0110 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.0e-31 140.2 167 51.5
Solyc04g072590.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 2.5e-30 137.9 363 32.5
Peaxi162Scf00066g01218 Petunia axillaris HOM05D005268 ORTHO05D000493 7.2e-30 136.3 348 34.5
CAN.G535.6 Capsicum annuum HOM05D001396 ORTHO05D000493 6.1e-29 133.3 276 37.7
Nitab4.5_0003375g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.0e-28 132.5 341 35.2
Nitab4.5_0004040g0030 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.0e-28 131.0 153 46.4
Solyc04g072330.1 Solanum lycopersicum HOM05D001396 ORTHO05D000493 3.9e-28 130.6 323 32.8
CAN.G535.4 Capsicum annuum HOM05D001396 ORTHO05D000493 8.8e-28 129.4 308 33.1
Nitab4.5_0001483g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.2e-26 124.8 169 44.4
Nitab4.5_0005834g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.2e-26 122.9 249 33.7
PGSC0003DMG400039455 Solanum tuberosum HOM05D001396 ORTHO05D000493 1.0e-23 115.9 341 32.6
PGSC0003DMG401014790 Solanum tuberosum HOM05D005268 ORTHO05D000493 6.5e-23 113.2 170 42.4
CAN.G484.41 Capsicum annuum HOM05D005268 ORTHO05D000493 1.5e-22 112.1 211 40.3
Nitab4.5_0000203g0160 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.6e-21 108.6 464 27.2
Peaxi162Scf00051g00515 Petunia axillaris HOM05D005268 ORTHO05D000493 4.7e-21 107.1 108 52.8
Peaxi162Scf01113g00014 Petunia axillaris HOM05D005268 ORTHO05D000493 5.2e-20 103.6 235 34.5
PGSC0003DMG400023030 Solanum tuberosum HOM05D005268 ORTHO05D000493 2.0e-19 101.7 209 38.3
Nitab4.5_0013834g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.6e-19 101.3 272 33.8
Nitab4.5_0002444g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.3e-18 99.0 217 33.2
Nitab4.5_0008803g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.7e-18 98.6 125 41.6
Dinv18997 Davidia involucrata HOM05D001396 ORTHO05D000493 8.2e-18 96.3 592 25.5
PGSC0003DMG400027796 Solanum tuberosum HOM05D000147 ORTHO05D004360 8.2e-18 96.3 135 44.4
Peaxi162Scf00066g01412 Petunia axillaris HOM05D005268 ORTHO05D000493 1.1e-17 95.9 140 42.1
Solyc04g072320.3 Solanum lycopersicum HOM05D005268 ORTHO05D000493 1.4e-17 95.5 118 45.8
Peaxi162Scf00613g00065 Petunia axillaris HOM05D005268 ORTHO05D000493 1.8e-17 95.1 218 32.6
Nitab4.5_0000203g0170 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.0e-15 89.4 116 46.6
PGSC0003DMG400006248 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.3e-15 89.0 84 53.6
Solyc01g056960.1 Solanum lycopersicum HOM05D005268 ORTHO05D007166 1.7e-15 88.6 180 38.3
Peaxi162Scf00338g00522 Petunia axillaris HOM05D005268 ORTHO05D000493 5.0e-15 87.0 114 45.6
PGSC0003DMG400040763 Solanum tuberosum HOM05D001396 ORTHO05D000493 6.5e-15 86.7 205 33.7
CAN.G535.5 Capsicum annuum HOM05D005268 ORTHO05D000493 1.5e-14 85.5 111 43.2
Solyc04g072340.1 Solanum lycopersicum HOM05D005268 ORTHO05D000493 1.5e-14 85.5 94 43.6
Nitab4.5_0000203g0190 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.9e-14 85.1 119 42.0
Peaxi162Scf00548g00422 Petunia axillaris HOM05D001396 ORTHO05D000493 3.2e-14 84.3 457 26.0
Peaxi162Scf00226g00815 Petunia axillaris HOM05D001396 ORTHO05D000493 1.2e-13 82.4 483 25.7
PGSC0003DMG400046152 Solanum tuberosum HOM05D005268 ORTHO05D000493 1.2e-13 82.4 112 46.4
Nitab4.5_0014138g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.6e-13 82.0 114 43.0
Nitab4.5_0008458g0050 Nicotiana tabacum HOM05D000051 ORTHO05D000493 3.6e-13 80.9 128 43.8
Peaxi162Scf00548g00534 Petunia axillaris HOM05D001396 ORTHO05D000493 4.7e-13 80.5 331 27.5
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 2.3e-12 78.2 572 23.4
Dinv39820 Davidia involucrata HOM05D001396 ORTHO05D000493 4.0e-12 77.4 307 29.0
Nitab4.5_0004040g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 8.8e-12 76.3 75 54.7
Peaxi162Scf00001g13011 Petunia axillaris HOM05D005268 ORTHO05D000493 8.8e-12 76.3 193 33.2
Rhsim13G0172800 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.6e-11 74.7 566 23.9
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 2.6e-11 74.7 123 43.1
Solyc02g092290.4 Solanum lycopersicum HOM05D001396 ORTHO05D000493 4.4e-11 73.9 450 25.6
PGSC0003DMG400047210 Solanum tuberosum HOM05D005268 ORTHO05D000493 4.4e-11 73.9 107 48.6
Eucgr.E03702 Eucalyptus grandis HOM05D001396 ORTHO05D000493 1.3e-10 72.4 386 26.4
Hund23611 Selenicereus undatus HOM05D001396 ORTHO05D000493 1.3e-10 72.4 301 28.2
Dinv39819 Davidia involucrata HOM05D001396 ORTHO05D000493 2.8e-10 71.2 311 28.9
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 2.8e-10 71.2 239 30.5
Nitab4.5_0001915g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 2.8e-10 71.2 120 38.3
Peaxi162Scf00548g00426 Petunia axillaris HOM05D001396 ORTHO05D000493 3.7e-10 70.9 318 28.0
Sopen02g036860 Solanum pennellii HOM05D001396 ORTHO05D000493 3.7e-10 70.9 452 25.4
PGSC0003DMG400021415 Solanum tuberosum HOM05D001396 ORTHO05D000493 3.7e-10 70.9 450 25.3
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 4.8e-10 70.5 589 23.1
Nitab4.5_0005678g0010 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.4e-09 68.9 81 42.0
Peaxi162Scf00066g01135 Petunia axillaris HOM05D005268 ORTHO05D000493 1.4e-09 68.9 229 30.6
CAN.G93.10 Capsicum annuum HOM05D001396 ORTHO05D000493 1.8e-09 68.6 272 25.7
Peaxi162Scf00241g00025 Petunia axillaris HOM05D001396 ORTHO05D000493 2.4e-09 68.2 261 29.5
Nitab4.5_0010157g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 3.1e-09 67.8 99 42.4
Nitab4.5_0001111g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 7.0e-09 66.6 100 45.0
QL05p072819 Quercus lobata HOM05D001396 ORTHO05D000493 7.0e-09 66.6 536 24.1
PGSC0003DMG400017472 Solanum tuberosum HOM05D001396 ORTHO05D000493 9.1e-09 66.2 372 22.8
PGSC0003DMG400023162 Solanum tuberosum HOM05D001396 ORTHO05D000493 9.1e-09 66.2 369 23.6
CANSAT80G1127 Cannabis sativa HOM05D000051 ORTHO05D010453 1.6e-08 65.5 168 29.8
Dinv39824 Davidia involucrata HOM05D001396 ORTHO05D000493 1.6e-08 65.5 209 28.7
Nitab4.5_0005678g0040 Nicotiana tabacum HOM05D005268 ORTHO05D000493 1.6e-08 65.5 279 29.7
Peaxi162Scf00066g01136 Petunia axillaris HOM05D005268 ORTHO05D000493 1.6e-08 65.5 62 53.2
Peaxi162Scf00438g00826 Petunia axillaris HOM05D001396 ORTHO05D000493 1.6e-08 65.5 412 26.2
HanXRQChr05g0139821 Helianthus annuus HOM05D001396 ORTHO05D000493 2.0e-08 65.1 259 29.0
Nitab4.5_0005678g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 2.0e-08 65.1 113 39.8
CANSAT80G0656 Cannabis sativa HOM05D000051 ORTHO05D010453 3.5e-08 64.3 164 29.9
CAN.G1075.43 Capsicum annuum HOM05D001396 ORTHO05D000493 3.5e-08 64.3 462 24.9
BolC5t33489H Brassica oleracea HOM05D002909 ORTHO05D000493 4.5e-08 63.9 198 28.3
Nitab4.5_0003574g0060 Nicotiana tabacum HOM05D001396 ORTHO05D000493 4.5e-08 63.9 597 22.6
Eucgr.E03703 Eucalyptus grandis HOM05D001396 ORTHO05D000493 7.7e-08 63.2 251 28.7
Dinv40493 Davidia involucrata HOM05D001396 ORTHO05D000493 1.0e-07 62.8 256 27.7
Peaxi162Scf00756g00430 Petunia axillaris HOM05D005268 ORTHO05D000493 1.0e-07 62.8 60 53.3
Nitab4.5_0000190g0130 Nicotiana tabacum HOM05D001396 ORTHO05D000493 1.3e-07 62.4 213 29.6
QL04p018567 Quercus lobata HOM05D001396 ORTHO05D000493 2.3e-07 61.6 119 36.1
CANSAT54G2109 Cannabis sativa HOM05D000051 ORTHO05D010453 3.8e-07 60.8 117 29.1
AUR62028040 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.0e-07 60.5 183 31.1
Nitab4.5_0008458g0020 Nicotiana tabacum HOM05D005268 ORTHO05D000493 5.0e-07 60.5 59 45.8
Actinidia24061 Actinidia chinensis HOM05D001396 ORTHO05D000493 6.5e-07 60.1 288 26.7
Dinv39822 Davidia involucrata HOM05D001396 ORTHO05D000493 6.5e-07 60.1 147 34.7
QL04p018553 Quercus lobata HOM05D001396 ORTHO05D000493 1.5e-06 58.9 236 27.5
QL04p018599 Quercus lobata HOM05D001396 ORTHO05D000493 1.5e-06 58.9 307 25.4
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 1.9e-06 58.5 267 25.8
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.9e-06 58.5 346 24.3
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.5e-06 58.2 185 27.6
Rhsim13G0170600 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.5e-06 58.2 122 34.4
CANSAT54G2398 Cannabis sativa HOM05D000051 ORTHO05D010453 3.2e-06 57.8 117 27.4
BcaC06g31035 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-06 57.4 88 38.6
Peaxi162Scf00548g00425 Petunia axillaris HOM05D001396 ORTHO05D000493 4.2e-06 57.4 342 22.5
Peaxi162Scf00613g00066 Petunia axillaris HOM05D005268 ORTHO05D000493 4.2e-06 57.4 173 32.4
Lsat_1_v5_gn_7_24521 Lactuca sativa HOM05D001396 ORTHO05D000493 5.5e-06 57.0 253 28.9
Atru.chr8.2406 Acer truncatum HOM05D000051 ORTHO05D000015 7.2e-06 56.6 116 33.6
CANSAT80G2150 Cannabis sativa HOM05D000051 ORTHO05D010453 7.2e-06 56.6 117 26.5
Lsat_1_v5_gn_7_24461 Lactuca sativa HOM05D001396 ORTHO05D000493 7.2e-06 56.6 113 34.5
QL04p018651 Quercus lobata HOM05D001396 ORTHO05D000493 7.2e-06 56.6 317 25.2
AUR62020685 Chenopodium quinoa HOM05D000051 ORTHO05D000015 9.5e-06 56.2 183 30.1


User provided reference genes

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