Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 2.3e-148 529.3 314 100.0
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 6.1e-32 142.5 174 55.7
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 5.5e-25 119.4 148 50.7
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-23 115.2 129 55.8
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-23 115.2 121 56.2
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.8e-23 112.1 127 54.3
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-22 110.9 115 53.9
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.4e-22 109.8 127 53.5
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-21 107.1 127 52.0
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.8e-20 104.4 165 44.8
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.8e-20 104.4 126 51.6
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.3e-20 102.8 118 51.7
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 5.3e-20 102.8 155 44.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.6e-19 101.3 126 49.2
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.6e-19 101.3 126 49.2
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 2.0e-19 100.9 151 43.0
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 2.2e-18 97.4 143 46.9
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.9e-18 97.1 147 46.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 5.0e-18 96.3 150 43.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.1e-17 95.1 110 52.7
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.1e-16 90.9 119 52.1
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 2.7e-16 90.5 103 50.5
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.6e-16 90.1 176 39.8
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-15 88.2 77 62.3
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 5.2e-15 86.3 144 41.0
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 9.7e-14 82.0 165 40.0
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.6e-11 74.7 71 60.6
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 1.3e-10 71.6 174 32.2
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.3e-10 71.6 104 40.4
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.3e-10 71.6 82 50.0
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 2.2e-10 70.9 162 38.3
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.0e-10 69.7 135 37.0
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.0e-10 69.7 135 37.0
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 5.0e-10 69.7 91 47.3
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-10 69.3 81 49.4
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 6.5e-10 69.3 81 49.4
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 8.5e-10 68.9 126 38.9
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.1e-09 68.6 137 40.1
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.5e-09 68.2 131 39.7
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 1.9e-09 67.8 118 40.7
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 3.2e-09 67.0 134 32.1
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 4.2e-09 66.6 130 34.6
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 5.5e-09 66.2 118 41.5
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 5.5e-09 66.2 83 48.2
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 5.5e-09 66.2 149 38.9
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 5.5e-09 66.2 91 47.3
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 7.2e-09 65.9 81 45.7
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 7.2e-09 65.9 112 38.4
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.2e-08 65.1 157 39.5
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.6e-08 64.7 137 35.0
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 2.1e-08 64.3 95 38.9
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 2.7e-08 63.9 148 34.5
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 3.6e-08 63.5 82 50.0
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.6e-08 63.5 82 50.0
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 4.7e-08 63.2 90 37.8
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 4.7e-08 63.2 75 53.3
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.7e-08 63.2 157 31.2
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 6.1e-08 62.8 90 44.4
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 6.1e-08 62.8 134 34.3
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.1e-08 62.8 121 35.5
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 8.0e-08 62.4 112 40.2
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 8.0e-08 62.4 76 48.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.0e-07 62.0 143 34.3
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 1.0e-07 62.0 100 40.0
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.4e-07 61.6 105 42.9
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.4e-07 61.6 165 33.3
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.4e-07 61.6 165 33.9
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.8e-07 61.2 73 43.8
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 2.3e-07 60.8 115 36.5
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 5.2e-07 59.7 115 40.9
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 5.2e-07 59.7 136 33.1
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 5.2e-07 59.7 124 35.5
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 6.8e-07 59.3 133 36.1
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 6.8e-07 59.3 155 32.9
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 8.8e-07 58.9 81 46.9
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 8.8e-07 58.9 86 43.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.2e-06 58.5 178 31.5
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.5e-06 58.2 68 48.5
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 2.0e-06 57.8 102 39.2
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 2.0e-06 57.8 176 33.5
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.0e-06 57.8 135 35.6
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 2.6e-06 57.4 91 44.0
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 3.4e-06 57.0 119 34.5
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 4.4e-06 56.6 213 30.5
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 9.8e-06 55.5 129 31.8


User provided reference genes

Program Settings