Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.2e-115 419.9 219 100.0
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.9e-103 379.4 219 90.9
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 5.4e-103 377.9 219 91.3
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 9.2e-103 377.1 219 90.4
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.2e-97 360.1 221 88.7
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.3e-83 313.5 236 75.8
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 4.9e-80 301.6 236 74.6
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 2.9e-72 275.8 237 67.9
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 6.7e-69 264.6 246 65.9
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.6e-57 226.1 234 59.0
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 4.6e-54 215.3 224 57.1
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 5.1e-53 211.8 224 56.7
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 8.7e-53 211.1 244 51.6
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.1e-52 210.7 239 54.8
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.6e-49 199.5 254 50.8
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.2e-48 196.4 252 50.0
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.9e-48 196.1 236 50.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.9e-47 193.4 216 55.1
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 7.2e-47 191.4 283 47.7
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.2e-46 190.7 235 49.8
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 3.0e-45 186.0 235 52.3
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 8.8e-45 184.5 237 51.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 7.4e-44 181.4 228 51.3
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.7e-43 180.3 210 55.7
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 3.7e-43 179.1 242 47.9
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 6.3e-43 178.3 235 51.1
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.8e-42 176.8 230 48.3
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 2.6e-41 172.9 209 49.3
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 6.1e-38 161.8 265 42.6
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 7.9e-38 161.4 221 48.4
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.4e-37 160.6 228 46.9
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.4e-37 160.6 182 53.3
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.8e-37 160.2 232 44.8
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.8e-37 160.2 199 48.7
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 2.3e-37 159.8 228 50.4
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 3.0e-37 159.5 235 45.1
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 3.9e-37 159.1 228 46.9
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 3.9e-37 159.1 217 45.2
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.1e-36 157.5 216 49.1
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 5.7e-36 155.2 229 47.2
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.3e-35 154.1 241 43.2
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 4.8e-35 152.1 225 46.2
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 6.3e-35 151.8 226 45.6
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.4e-34 150.6 225 47.1
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.8e-34 150.2 238 42.9
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.8e-34 150.2 241 43.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 3.1e-34 149.4 250 43.2
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.1e-34 149.4 225 45.3
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.1e-34 149.4 226 45.1
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 3.1e-34 149.4 234 43.6
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 4.1e-34 149.1 229 44.1
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 5.3e-34 148.7 168 50.0
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 9.1e-34 147.9 226 46.5
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 9.1e-34 147.9 226 44.7
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 9.1e-34 147.9 226 44.7
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.6e-33 147.1 231 45.5
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.6e-33 146.4 229 42.4
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.6e-33 146.4 153 52.9
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 2.6e-33 146.4 229 43.7
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.9e-33 145.2 219 46.1
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.7e-32 143.7 245 41.6
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 5.0e-32 142.1 236 42.4
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 8.5e-32 141.4 233 44.6
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 8.5e-32 141.4 214 42.1
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.9e-31 140.2 231 43.7
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 3.2e-31 139.4 233 45.5
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 7.2e-31 138.3 212 44.3
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 1.2e-30 137.5 245 40.4
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.6e-30 137.1 230 42.2
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 2.1e-30 136.7 179 45.8
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 3.6e-30 136.0 230 41.7
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.0e-29 132.9 232 41.8
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 6.7e-29 131.7 227 41.9
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.4e-28 129.0 161 55.3
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 1.7e-27 127.1 207 44.0
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 3.7e-27 125.9 222 39.6
Sopen01g004270 Solanum pennellii HOM05D005900 ORTHO05D007306 4.8e-27 125.6 92 84.8
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.1e-26 124.4 214 38.8
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.4e-26 124.0 235 39.1
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.8e-26 123.6 205 41.0
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.1e-26 122.9 218 38.1
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 5.3e-26 122.1 232 36.2
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 5.3e-26 122.1 207 43.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 4.5e-25 119.0 218 39.0
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 5.9e-25 118.6 221 41.2
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.7e-25 118.2 216 37.0
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.8e-24 115.9 211 38.9
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.9e-23 113.6 219 39.3
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 4.2e-23 112.5 205 37.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 4.2e-23 112.5 215 41.4
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 5.5e-23 112.1 213 39.0
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 7.2e-23 111.7 205 37.6
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 7.2e-23 111.7 213 39.0
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.2e-22 110.9 151 43.0
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.6e-22 110.5 214 38.8
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.6e-22 110.5 151 43.0
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 3.6e-22 109.4 205 36.6
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 4.7e-22 109.0 222 36.5
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 6.1e-22 108.6 81 61.7
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 2.3e-21 106.7 211 37.0
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 6.8e-21 105.1 243 35.8
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 1.5e-20 104.0 223 39.9
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.5e-20 104.0 218 36.7
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 2.0e-20 103.6 255 35.3
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 8.3e-19 98.2 223 39.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.1e-18 97.8 185 39.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.1e-18 97.8 226 34.5
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 3.1e-18 96.3 216 34.3
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 3.1e-18 96.3 219 40.2
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 5.4e-18 95.5 215 34.4
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.0e-18 95.1 198 40.4
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 9.1e-18 94.7 209 36.8
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.2e-17 94.4 161 37.3
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.6e-17 94.0 216 34.3
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.0e-17 93.6 219 38.8
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.7e-16 90.5 94 47.9
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 6.5e-16 88.6 215 37.2
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.3e-13 80.1 158 40.5
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.0e-13 79.7 158 40.5
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 4.0e-13 79.3 156 34.6
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 2.0e-12 77.0 68 51.5
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.6e-12 76.6 175 34.9
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.0e-10 68.6 143 39.9
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 2.9e-08 63.2 43 62.8
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 4.3e-07 59.3 239 28.5
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 4.7e-06 55.8 196 32.1


User provided reference genes

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