Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 2.1e-42 175.3 88 100.0
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 1.5e-32 142.5 87 82.8
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 7.9e-29 130.2 88 76.1
Peaxi162Scf01141g00003 Petunia axillaris HOM05D003533 ORTHO05D004009 8.7e-28 126.7 90 77.8
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.1e-27 126.3 88 76.1
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 3.1e-25 118.2 91 74.7
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 7.6e-24 113.6 90 72.2
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.9e-19 99.0 83 65.1
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 4.3e-19 97.8 83 63.9
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 6.7e-12 73.9 96 53.1
Oeu060842.1 Olea europaea HOM05D003533 ORTHO05D004009 1.1e-11 73.2 77 58.4
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 1.1e-11 73.2 76 57.9
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.3e-11 71.6 76 57.9
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 3.3e-11 71.6 80 51.2
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 4.3e-11 71.2 79 54.4
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.3e-11 71.2 76 57.9
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.7e-10 69.3 76 55.3
Lalb_Chr12g0201351 Lupinus albus HOM05D003533 ORTHO05D004009 2.2e-10 68.9 70 54.3
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 2.8e-10 68.6 78 50.0
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.8e-10 67.8 76 55.3
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 6.3e-10 67.4 81 50.6
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 6.3e-10 67.4 81 50.6
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 8.2e-10 67.0 74 47.3
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.1e-09 66.6 76 55.3
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.1e-09 66.6 75 53.3
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.4e-09 66.2 89 51.7
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.4e-09 66.2 89 51.7
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 1.8e-09 65.9 70 52.9
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.4e-09 65.5 89 51.7
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.4e-09 65.5 89 50.6
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 2.4e-09 65.5 75 50.7
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 3.1e-09 65.1 75 46.7
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 4.1e-09 64.7 91 51.6
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 4.1e-09 64.7 73 49.3
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 5.3e-09 64.3 76 53.9
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 5.3e-09 64.3 74 48.6
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 6.9e-09 63.9 81 49.4
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 6.9e-09 63.9 88 50.0
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 6.9e-09 63.9 88 50.0
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 9.1e-09 63.5 78 51.3
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 9.1e-09 63.5 80 48.8
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.2e-08 63.2 87 54.0
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 1.2e-08 63.2 78 48.7
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.2e-08 63.2 73 52.1
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 1.5e-08 62.8 77 46.8
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 1.5e-08 62.8 90 51.1
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 1.5e-08 62.8 71 49.3
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 1.5e-08 62.8 71 49.3
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 2.6e-08 62.0 73 47.9
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 3.4e-08 61.6 93 46.2
Rhsim12G0161400 Rhododendron simsii HOM05D003533 ORTHO05D004009 3.4e-08 61.6 66 53.0
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 4.5e-08 61.2 80 52.5
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 4.5e-08 61.2 80 52.5
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 4.5e-08 61.2 77 41.6
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 5.9e-08 60.8 80 47.5
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 5.9e-08 60.8 77 44.2
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 5.9e-08 60.8 71 50.7
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 7.7e-08 60.5 78 51.3
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 7.7e-08 60.5 76 47.4
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 7.7e-08 60.5 75 52.0
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 7.7e-08 60.5 71 53.5
Rhsim12G0161300 Rhododendron simsii HOM05D003533 ORTHO05D004009 7.7e-08 60.5 67 50.7
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.0e-07 60.1 85 44.7
Migut.E00134 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.3e-07 59.7 73 43.8
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 1.3e-07 59.7 71 50.7
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.3e-07 59.7 78 53.8
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.7e-07 59.3 91 47.3
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.7e-07 59.3 73 52.1
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 1.7e-07 59.3 78 50.0
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.2e-07 58.9 87 42.5
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 2.9e-07 58.5 68 48.5
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 3.8e-07 58.2 74 41.9
CSS0048422 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.8e-07 58.2 68 51.5
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 3.8e-07 58.2 74 48.6
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 3.8e-07 58.2 86 48.8
MD16G1084900 Malus domestica HOM05D003533 ORTHO05D004009 5.0e-07 57.8 75 46.7
Atru.chr11.1939 Acer truncatum HOM05D003533 ORTHO05D004009 6.5e-07 57.4 78 46.2
DCAR_026103 Daucus carota HOM05D003533 ORTHO05D004009 6.5e-07 57.4 81 50.6
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 8.5e-07 57.0 73 47.9
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 8.5e-07 57.0 85 45.9
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 8.5e-07 57.0 74 44.6
Ciclev10033215m.g Citrus clementina HOM05D003533 ORTHO05D004009 1.1e-06 56.6 83 42.2
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 1.1e-06 56.6 76 50.0
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 1.4e-06 56.2 77 49.4
ATR0712G042 Amborella trichopoda HOM05D003533 ORTHO05D004009 3.2e-06 55.1 77 44.2
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 3.2e-06 55.1 69 49.3
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 3.2e-06 55.1 88 45.5
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 3.2e-06 55.1 77 46.8
ATR0712G093 Amborella trichopoda HOM05D003533 ORTHO05D004009 5.5e-06 54.3 76 44.7
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 7.2e-06 53.9 80 46.2
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 9.4e-06 53.5 91 44.0
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 9.4e-06 53.5 93 45.2
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 9.4e-06 53.5 91 38.5


User provided reference genes

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