Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022484 Solanum tuberosum HOM05D008577 ORTHO05D010519 4.4e-200 701.0 344 100.0
PGSC0003DMG400022485 Solanum tuberosum HOM05D008577 ORTHO05D010519 5.2e-177 624.4 344 89.0
Solyc01g098280.4 Solanum lycopersicum HOM05D008577 ORTHO05D010519 4.6e-165 584.7 347 86.5
Sopen01g041850 Solanum pennellii HOM05D008577 ORTHO05D010519 3.7e-159 565.1 334 86.8
Nitab4.5_0001165g0110 Nicotiana tabacum HOM05D000160 ORTHO05D010519 4.1e-73 279.3 543 37.2
PGSC0003DMG400022478 Solanum tuberosum HOM05D000160 ORTHO05D000914 1.4e-65 254.2 546 35.9
CAN.G134.220 Capsicum annuum HOM05D000160 ORTHO05D000914 1.6e-61 240.7 529 35.9
CAN.G134.218 Capsicum annuum HOM05D000160 ORTHO05D010519 2.3e-60 236.9 501 34.9
Nitab4.5_0001165g0070 Nicotiana tabacum HOM05D000160 ORTHO05D010519 2.9e-58 229.9 650 31.2
Solyc01g098340.3 Solanum lycopersicum HOM05D000160 ORTHO05D000914 1.9e-57 227.3 512 35.7
Peaxi162Scf00225g00625 Petunia axillaris HOM05D000160 ORTHO05D000914 9.2e-57 224.9 420 38.8
Sopen01g041900 Solanum pennellii HOM05D000160 ORTHO05D000914 1.3e-55 221.1 512 35.2
Nitab4.5_0000245g0200 Nicotiana tabacum HOM05D008577 ORTHO05D010519 2.3e-55 220.3 371 41.0
Peaxi162Scf00225g00412 Petunia axillaris HOM05D008577 ORTHO05D010519 2.6e-51 206.8 554 32.5
CAN.G1034.14 Capsicum annuum HOM05D000160 ORTHO05D000914 6.4e-50 202.2 398 38.7
PGSC0003DMG400022481 Solanum tuberosum HOM05D000160 ORTHO05D010519 5.1e-47 192.6 476 34.2
Solyc01g098310.3 Solanum lycopersicum HOM05D000160 ORTHO05D010519 4.3e-46 189.5 389 36.5
Peaxi162Scf00109g10114 Petunia axillaris HOM05D008577 ORTHO05D010519 7.1e-41 172.2 337 36.2
Solyc01g098330.1 Solanum lycopersicum HOM05D000160 ORTHO05D010519 1.2e-40 171.4 278 43.9
Peaxi162Scf01445g00115 Petunia axillaris HOM05D008577 ORTHO05D010519 6.0e-40 169.1 337 35.6
Sopen01g041870 Solanum pennellii HOM05D000160 ORTHO05D010519 7.8e-40 168.7 204 49.5
Solyc01g098300.1 Solanum lycopersicum HOM05D008577 ORTHO05D010519 1.7e-39 167.5 139 59.0
Sopen01g041890 Solanum pennellii HOM05D000160 ORTHO05D010519 3.9e-39 166.4 383 35.2
Peaxi162Scf00609g00063 Petunia axillaris HOM05D008577 ORTHO05D010519 5.1e-39 166.0 337 34.7
Peaxi162Scf00308g00111 Petunia axillaris HOM05D008577 ORTHO05D010519 8.6e-39 165.2 337 34.7
PGSC0003DMG400022483 Solanum tuberosum HOM05D008577 ORTHO05D010519 1.1e-38 164.9 139 60.4
Solyc01g098270.1 Solanum lycopersicum HOM05D008577 ORTHO05D010519 1.9e-38 164.1 139 57.6
Sopen01g041860 Solanum pennellii HOM05D008577 ORTHO05D010519 1.9e-38 164.1 139 58.3
Peaxi162Scf00109g00152 Petunia axillaris HOM05D008577 ORTHO05D010519 5.6e-38 162.5 325 35.1
Peaxi162Scf00090g00211 Petunia axillaris HOM05D008577 ORTHO05D010519 9.6e-38 161.8 325 35.1
Sopen01g041840 Solanum pennellii HOM05D008577 ORTHO05D010519 2.1e-37 160.6 139 56.8
Peaxi162Scf00269g10121 Petunia axillaris HOM05D008577 ORTHO05D010519 3.6e-37 159.8 320 35.3
Solyc01g005700.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 3.6e-37 159.8 109 70.6
Sopen01g001710 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-37 159.8 109 70.6
Peaxi162Scf00888g00311 Petunia axillaris HOM05D008577 ORTHO05D010519 8.1e-37 158.7 337 34.1
Peaxi162Scf00349g00074 Petunia axillaris HOM05D000017 ORTHO05D000013 1.4e-36 157.9 134 59.7
Peaxi162Scf01473g00011 Petunia axillaris HOM05D008577 ORTHO05D010519 6.8e-36 155.6 330 34.5
Peaxi162Scf00273g00061 Petunia axillaris HOM05D008577 ORTHO05D010519 1.5e-35 154.5 325 34.8
Nitab4.5_0001730g0080 Nicotiana tabacum HOM05D008577 ORTHO05D010519 2.6e-35 153.7 109 67.9
Nitab4.5_0011238g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.6e-35 153.7 109 67.9
Peaxi162Scf00218g00182 Petunia axillaris HOM05D008577 ORTHO05D010519 2.9e-34 150.2 325 33.8
Peaxi162Scf00609g00062 Petunia axillaris HOM05D008577 ORTHO05D010519 2.9e-34 150.2 318 34.3
Peaxi162Scf00107g00053 Petunia axillaris HOM05D008577 ORTHO05D010519 3.8e-34 149.8 327 33.9
Peaxi162Scf00856g00033 Petunia axillaris HOM05D008577 ORTHO05D010519 8.4e-34 148.7 311 34.1
Peaxi162Scf00605g00044 Petunia axillaris HOM05D008577 ORTHO05D010519 1.1e-33 148.3 316 34.2
Peaxi162Scf00468g00008 Petunia axillaris HOM05D008577 ORTHO05D010519 3.2e-33 146.7 121 59.5
Peaxi162Scf00606g00516 Petunia axillaris HOM05D008577 ORTHO05D010519 1.6e-32 144.4 386 32.9
Nitab4.5_0018528g0010 Nicotiana tabacum HOM05D000160 ORTHO05D000914 8.7e-31 138.7 456 29.4
Nitab4.5_0001165g0130 Nicotiana tabacum HOM05D000160 ORTHO05D000914 1.9e-30 137.5 106 66.0
Peaxi162Scf00046g01112 Petunia axillaris HOM05D008577 ORTHO05D010519 1.9e-30 137.5 311 33.8
Peaxi162Scf00151g00053 Petunia axillaris HOM05D008577 ORTHO05D010519 1.9e-30 137.5 297 34.0
PGSC0003DMG400022487 Solanum tuberosum HOM05D000160 ORTHO05D000914 2.8e-29 133.7 396 31.1
Sopen01g041830 Solanum pennellii HOM05D000160 ORTHO05D000914 3.1e-28 130.2 371 32.1
Peaxi162Scf00326g00045 Petunia axillaris HOM05D008577 ORTHO05D010519 6.9e-28 129.0 325 31.7
Sopen00g008510 Solanum pennellii HOM05D000160 ORTHO05D000914 1.3e-26 124.8 120 56.7
Nitab4.5_0007678g0010 Nicotiana tabacum HOM05D008577 ORTHO05D010519 2.4e-25 120.6 106 57.5
Solyc01g098250.4 Solanum lycopersicum HOM05D000160 ORTHO05D000914 2.4e-25 120.6 106 60.4
CAN.G134.217 Capsicum annuum HOM05D000160 ORTHO05D000914 1.2e-24 118.2 106 60.4
CAN.G753.2 Capsicum annuum HOM05D000160 ORTHO05D010519 3.9e-23 113.2 131 48.1
PGSC0003DMG400022486 Solanum tuberosum HOM05D008577 ORTHO05D049415 1.3e-21 108.2 90 60.0
Rhsim13G0231800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-21 107.8 102 48.0
vmacro04230 Vaccinium macrocarpon HOM05D008577 ORTHO05D010519 2.8e-21 107.1 111 45.0
CSS0013232 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.8e-21 106.3 104 49.0
CSS0037974 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.2e-21 105.9 150 38.0
Actinidia16253 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.8e-20 104.4 140 40.0
Peaxi162Scf00477g00003 Petunia axillaris HOM05D008577 ORTHO05D010519 9.9e-19 98.6 74 60.8
Nitab4.5_0001165g0040 Nicotiana tabacum HOM05D008577 ORTHO05D049415 1.3e-18 98.2 95 55.8
Hma1.2p1_0062F.1_g034250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.9e-18 96.3 97 48.5
Hma1.2p1_0062F.1_g034320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-18 95.5 97 48.5
PGSC0003DMG400022922 Solanum tuberosum HOM05D008577 ORTHO05D010519 2.4e-17 94.0 115 45.2
Peaxi162Scf00548g00646 Petunia axillaris HOM05D008577 ORTHO05D010519 5.5e-17 92.8 316 29.1
PGSC0003DMG400038982 Solanum tuberosum HOM05D000160 ORTHO05D000914 1.2e-16 91.7 57 73.7
Peaxi162Scf00113g00101 Petunia axillaris HOM05D008577 ORTHO05D010519 1.6e-16 91.3 271 29.9
Peaxi162Scf00886g10021 Petunia axillaris HOM05D008577 ORTHO05D010519 1.6e-16 91.3 271 29.9
Nitab4.5_0000245g0180 Nicotiana tabacum HOM05D000160 ORTHO05D000914 1.3e-15 88.2 370 28.1
Nitab4.5_0001165g0080 Nicotiana tabacum HOM05D008577 ORTHO05D010519 1.1e-14 85.1 85 58.8
Peaxi162Scf00494g00513 Petunia axillaris HOM05D008577 ORTHO05D010519 1.5e-14 84.7 225 32.0
Solyc03g032065.1 Solanum lycopersicum HOM05D008577 ORTHO05D010519 1.5e-14 84.7 107 48.6
Nitab4.5_0002142g0040 Nicotiana tabacum HOM05D000160 ORTHO05D000914 1.9e-14 84.3 75 56.0
Peaxi162Scf00441g00318 Petunia axillaris HOM05D008577 ORTHO05D010519 4.3e-14 83.2 178 33.7
CAN.G368.1 Capsicum annuum HOM05D000160 ORTHO05D000914 5.6e-14 82.8 104 45.2
Peaxi162Scf00303g00012 Petunia axillaris HOM05D008577 ORTHO05D010519 9.6e-14 82.0 64 59.4
Nitab4.5_0000176g0050 Nicotiana tabacum HOM05D000160 ORTHO05D000914 1.3e-13 81.6 85 49.4
Peaxi162Scf00071g00079 Petunia axillaris HOM05D000160 ORTHO05D000914 1.3e-13 81.6 111 42.3
MSTRG.19494 Avicennia marina HOM05D000160 ORTHO05D000914 1.6e-13 81.3 97 46.4
Hma1.2p1_0055F.1_g031350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-13 80.5 119 38.7
Hma1.2p1_0240F.1_g100330 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-13 80.5 119 38.7
Hma1.2p1_0487F.1_g163640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-13 80.5 119 38.7
Hma1.2p1_0704F.1_g206830 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-13 80.5 119 38.7
Hma1.2p1_1473F.1_g285740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-13 80.5 119 38.7
Solyc08g029220.3 Solanum lycopersicum HOM05D000160 ORTHO05D000914 2.8e-13 80.5 69 58.0
Nn4g26520 Nelumbo nucifera HOM05D000017 ORTHO05D000013 3.7e-13 80.1 95 42.1
Hma1.2p1_0020F.1_g013900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-13 79.7 119 38.7
Hma1.2p1_1257F.1_g270760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-13 79.7 119 38.7
Hma1.2p1_0565F.1_g179620 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-12 78.6 119 38.7
Hma1.2p1_0909F.1_g235780 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-12 78.6 119 37.8
Sopen08g010160 Solanum pennellii HOM05D000160 ORTHO05D000914 1.4e-12 78.2 69 56.5
GSVIVG01014078001 Vitis vinifera HOM05D000017 ORTHO05D000013 1.8e-12 77.8 96 41.7
Nn4g26534 Nelumbo nucifera HOM05D000017 ORTHO05D000013 6.9e-12 75.9 161 32.9
PGSC0003DMG400014831 Solanum tuberosum HOM05D000160 ORTHO05D000914 6.9e-12 75.9 103 41.7
PGSC0003DMG400022482 Solanum tuberosum HOM05D000160 ORTHO05D000914 1.2e-11 75.1 411 25.8
Migut.L01519 Erythranthe guttata HOM05D000160 ORTHO05D000914 2.0e-11 74.3 67 53.7
MSTRG.26440 Avicennia marina HOM05D000160 ORTHO05D000914 2.9e-10 70.5 66 56.1
PGSC0003DMG400022479 Solanum tuberosum HOM05D000160 ORTHO05D000914 2.9e-10 70.5 62 58.1
Cfa015508 Carpinus fangiana HOM05D000160 ORTHO05D000914 8.4e-10 68.9 104 40.4
Dinv01730 Davidia involucrata HOM05D008203 ORTHO05D010058 2.5e-09 67.4 124 30.6
Sc20g0004660 Simmondsia chinensis HOM05D039075 ORTHO05D010519 2.5e-09 67.4 97 39.2
CSS0003176 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.2e-09 67.0 141 28.4
SalBow1G3024 Salvia bowleyana HOM05D000160 ORTHO05D000914 3.2e-09 67.0 75 48.0
Hma1.2p1_1466F.1_g285450 Hydrangea macrophylla HOM05D008203 ORTHO05D010058 4.2e-09 66.6 107 36.4
CAN.G753.3 Capsicum annuum HOM05D008577 ORTHO05D000914 1.2e-08 65.1 80 47.5
Haze_01043 Corylus avellana HOM05D000160 ORTHO05D000914 1.6e-08 64.7 103 36.9
Dinv09841 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-08 64.7 124 30.6
Dinv29071 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-08 64.7 101 32.7
Dinv12381 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 31.7
Dinv16664 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 32.7
Dinv19910 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 32.7
Dinv36938 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 32.7
Dinv42810 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 31.7
Dinv43291 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-08 64.3 101 31.7
Dinv03186 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Dinv05912 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Dinv26295 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Dinv26317 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Dinv28270 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Dinv41236 Davidia involucrata HOM05D008203 ORTHO05D010058 2.7e-08 63.9 124 30.6
Oeu010829.1 Olea europaea HOM05D000160 ORTHO05D000914 2.7e-08 63.9 55 49.1
Dinv01680 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 124 30.6
Dinv02734 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 30.7
Dinv04449 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 124 29.8
Dinv09224 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 31.7
Dinv15061 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 31.7
Dinv23878 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 31.7
Dinv24543 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 124 29.8
Dinv35176 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 31.7
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-08 63.5 101 31.7
SGA_v2.0_scaffold192G40626 Striga asiatica HOM05D000160 ORTHO05D000914 3.5e-08 63.5 87 43.7
Dinv17958 Davidia involucrata HOM05D008203 ORTHO05D010058 4.6e-08 63.2 101 30.7
Dinv19459 Davidia involucrata HOM05D008203 ORTHO05D010058 4.6e-08 63.2 97 35.1
Dinv39777 Davidia involucrata HOM05D008203 ORTHO05D010058 4.6e-08 63.2 101 32.7
Oeu055341.1 Olea europaea HOM05D000160 ORTHO05D000914 4.6e-08 63.2 55 50.9
CiPaw.01G154700 Carya illinoinensis HOM05D000160 ORTHO05D000914 6.0e-08 62.8 81 45.7
Dinv17953 Davidia involucrata HOM05D008203 ORTHO05D010058 6.0e-08 62.8 101 31.7
Dinv27607 Davidia involucrata HOM05D008203 ORTHO05D010058 6.0e-08 62.8 100 32.0
SalBow6G0402 Salvia bowleyana HOM05D000160 ORTHO05D000914 6.0e-08 62.8 55 54.5
SGA_v2.0_scaffold21G09412 Striga asiatica HOM05D000160 ORTHO05D000914 6.0e-08 62.8 68 47.1
Dinv39229 Davidia involucrata HOM05D008203 ORTHO05D010058 1.3e-07 61.6 101 31.7
unitig_578.g16413 Utricularia gibba HOM05D000160 ORTHO05D000914 1.3e-07 61.6 69 44.9
Actinidia16256 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.8e-07 61.2 138 31.2
Dinv03878 Davidia involucrata HOM05D008203 ORTHO05D010058 1.8e-07 61.2 101 30.7
Dinv21723 Davidia involucrata HOM05D008203 ORTHO05D010058 1.8e-07 61.2 101 30.7
arahy.Tifrunner.gnm1.ann1.L8KVB3 Arachis hypogaea HOM05D000160 ORTHO05D000914 2.3e-07 60.8 117 32.5
Migut.K01226 Erythranthe guttata HOM05D000160 ORTHO05D000914 2.3e-07 60.8 84 44.0
Dinv15828 Davidia involucrata HOM05D008203 ORTHO05D010058 3.0e-07 60.5 101 30.7
Thecc.05G250800 Theobroma cacao HOM05D000160 ORTHO05D000914 5.1e-07 59.7 55 50.9
Migut.J00574 Erythranthe guttata HOM05D000160 ORTHO05D000914 6.7e-07 59.3 84 42.9
Sabra05G0040100 Salix brachista HOM05D000160 ORTHO05D000914 6.7e-07 59.3 81 44.4
QL06p006981 Quercus lobata HOM05D000160 ORTHO05D000914 8.7e-07 58.9 60 50.0
arahy.Tifrunner.gnm1.ann1.VU3H9N Arachis hypogaea HOM05D000160 ORTHO05D000914 1.1e-06 58.5 117 32.5
Manes.15G019075 Manihot esculenta HOM05D000160 ORTHO05D000914 1.5e-06 58.2 63 49.2
CiPaw.01G154100 Carya illinoinensis HOM05D000160 ORTHO05D000914 1.9e-06 57.8 45 60.0
Glyma.07G252300 Glycine max HOM05D000160 ORTHO05D000914 1.9e-06 57.8 84 42.9
Potri.005G043200 Populus trichocarpa HOM05D000160 ORTHO05D000914 2.5e-06 57.4 85 40.0
Potri.013G029500 Populus trichocarpa HOM05D000160 ORTHO05D000914 2.5e-06 57.4 48 58.3
Sabra13G0029800 Salix brachista HOM05D000160 ORTHO05D000914 2.5e-06 57.4 72 45.8
Cc02_g32910 Coffea canephora HOM05D000160 ORTHO05D000914 3.3e-06 57.0 85 42.4
Glyma.03G242300 Glycine max HOM05D000160 ORTHO05D000914 3.3e-06 57.0 67 44.8
Hma1.2p1_1671F.1_g296750 Hydrangea macrophylla HOM05D000160 ORTHO05D000914 3.3e-06 57.0 74 40.5
MD04G1213700 Malus domestica HOM05D000160 ORTHO05D000914 3.3e-06 57.0 117 34.2
Phvul.003G100000 Phaseolus vulgaris HOM05D000160 ORTHO05D000914 3.3e-06 57.0 89 39.3
COL.COLO4_36072 Corchorus olitorius HOM05D000160 ORTHO05D000914 4.3e-06 56.6 87 40.2
Hma1.2p1_0078F.1_g040875 Hydrangea macrophylla HOM05D000160 ORTHO05D000914 4.3e-06 56.6 73 41.1
Lalb_Chr06g0167861 Lupinus albus HOM05D000160 ORTHO05D000914 4.3e-06 56.6 52 53.8
FAN05G4848 Fragaria x ananassa HOM05D000160 ORTHO05D000914 5.7e-06 56.2 83 39.8
FAN09G4124 Fragaria x ananassa HOM05D000160 ORTHO05D000914 7.4e-06 55.8 60 46.7
Lj9C676G6 Lonicera japonica HOM05D000160 ORTHO05D000914 7.4e-06 55.8 69 44.9
Lalb_Chr20g0118211 Lupinus albus HOM05D000160 ORTHO05D000914 7.4e-06 55.8 103 35.0
Manes.15G017900 Manihot esculenta HOM05D000160 ORTHO05D000914 7.4e-06 55.8 63 47.6
Glyma.17G022200 Glycine max HOM05D000160 ORTHO05D000914 9.6e-06 55.5 82 37.8
VMungo0540G2389 Vigna mungo HOM05D000160 ORTHO05D000914 9.6e-06 55.5 51 51.0


User provided reference genes

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