Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 3.4e-295 1017.7 547 100.0
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 5.4e-277 957.2 547 94.0
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 1.2e-276 956.1 547 94.7
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 8.3e-262 906.7 550 85.8
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 6.0e-244 847.4 551 81.1
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.1e-240 836.6 558 81.9
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.0e-227 793.5 508 83.1
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 3.3e-210 735.3 546 69.8
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.7e-209 733.0 546 69.2
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.9e-206 722.2 464 75.9
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.2e-205 718.8 467 75.2
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.1e-203 711.4 462 74.9
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.1e-202 710.3 460 76.1
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 5.7e-202 708.0 464 75.2
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 7.4e-202 707.6 459 76.0
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 7.4e-202 707.6 459 75.2
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 1.1e-200 703.7 467 74.9
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 1.4e-200 703.4 459 74.7
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.8e-200 703.0 459 75.8
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.4e-200 702.6 460 75.4
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 5.3e-200 701.4 460 75.0
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 9.1e-200 700.7 467 73.7
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.2e-199 700.3 536 67.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.2e-199 700.3 464 74.6
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.6e-199 699.9 460 75.9
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 5.9e-199 698.0 535 68.2
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 1.0e-198 697.2 556 64.2
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.3e-198 696.8 463 74.3
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 2.9e-198 695.7 467 72.8
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 1.9e-197 693.0 547 66.5
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.2e-197 691.8 467 72.6
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 7.2e-197 691.0 533 67.7
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 9.4e-197 690.6 459 73.4
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 1.2e-196 690.3 463 73.0
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 2.7e-196 689.1 458 74.0
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 6.1e-196 688.0 459 73.4
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 6.1e-196 688.0 467 73.4
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.4e-195 686.8 526 66.9
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 5.2e-195 684.9 465 72.7
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 2.0e-194 682.9 547 65.3
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 3.3e-194 682.2 467 70.9
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 3.3e-194 682.2 465 70.8
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 5.7e-194 681.4 459 73.2
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 7.5e-194 681.0 528 66.7
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 9.7e-194 680.6 546 63.0
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 9.7e-194 680.6 460 73.3
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.2e-193 679.5 467 71.3
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.8e-192 676.4 460 71.7
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 3.1e-192 675.6 459 72.5
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 4.5e-191 671.8 544 63.6
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 5.9e-191 671.4 443 74.3
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 2.2e-190 669.5 460 72.2
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.9e-190 669.1 459 72.3
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 2.9e-190 669.1 529 66.4
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 3.8e-190 668.7 480 69.8
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 6.5e-190 667.9 457 72.0
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 4.2e-189 665.2 459 70.6
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 7.2e-189 664.5 467 70.0
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 9.4e-189 664.1 467 70.4
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.0e-187 659.1 548 62.0
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 9.8e-186 654.1 469 69.9
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 9.8e-186 654.1 460 69.8
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 9.8e-186 654.1 465 69.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 8.3e-185 651.0 534 63.9
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 1.4e-184 650.2 460 69.3
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 1.8e-184 649.8 469 69.3
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.6e-183 646.7 545 62.9
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 7.7e-183 644.4 460 68.9
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.7e-182 643.3 544 62.3
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 2.2e-182 642.9 460 69.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 2.9e-182 642.5 469 68.7
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 5.0e-182 641.7 575 60.2
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 8.5e-182 641.0 473 67.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.1e-181 640.6 545 61.7
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 3.2e-181 639.0 440 72.0
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 7.2e-181 637.9 462 68.8
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.7e-180 636.0 442 70.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 4.4e-178 628.6 540 59.8
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 9.8e-178 627.5 464 66.8
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.7e-177 626.7 466 66.3
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 2.8e-177 625.9 459 68.6
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 4.1e-176 622.1 553 62.2
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 5.6e-173 611.7 465 65.2
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.1e-172 609.8 467 66.6
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 6.1e-172 608.2 465 64.7
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.0e-170 603.2 522 59.0
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 2.9e-169 599.4 510 61.0
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.1e-168 597.4 518 60.4
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 4.1e-168 595.5 516 60.9
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 1.2e-164 583.9 468 62.8
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.2e-162 577.4 460 63.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.4e-162 575.9 443 63.9
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 6.0e-159 565.1 509 57.0
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 7.8e-159 564.7 453 60.3
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 7.5e-154 548.1 488 60.7
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.7e-145 520.4 373 71.8
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.1e-144 517.7 405 63.2
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 5.4e-144 515.4 529 54.3
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 1.7e-137 493.8 355 66.8
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 4.3e-133 479.2 451 50.1
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.6e-127 459.1 407 57.0
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.0e-126 456.4 454 50.0
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.1e-123 448.0 302 69.5
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 6.9e-123 445.3 459 49.0
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 4.2e-120 436.0 455 48.6
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 6.0e-119 432.2 548 42.3
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 9.3e-112 408.3 452 46.7
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.1e-108 397.1 308 64.3
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 2.0e-106 390.6 439 44.2
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 5.9e-74 282.7 453 35.5
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 5.9e-66 256.1 425 34.4
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 7.5e-53 212.6 134 76.9
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.2e-47 195.3 385 38.2
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 1.8e-46 191.4 134 67.2
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 8.9e-46 189.1 137 65.0
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 5.2e-38 163.3 214 41.6
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 4.9e-36 156.8 107 72.9
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 6.0e-34 149.8 443 27.3
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 2.7e-26 124.4 92 66.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.2e-23 115.5 93 64.5
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.1e-22 110.9 68 82.4
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 4.0e-22 110.5 114 58.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 9.9e-21 105.9 220 35.5
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.7e-20 105.1 195 36.4
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 7.8e-18 96.3 208 32.2
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 3.0e-17 94.4 119 52.1
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 9.9e-13 79.3 455 23.5
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.9e-12 77.8 79 58.2
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 2.4e-11 74.7 51 64.7


User provided reference genes

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