Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 8.0e-77 290.4 154 100.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 1.8e-65 252.7 154 89.0
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 3.5e-64 248.4 154 87.0
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.3e-55 219.2 154 80.5
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.3e-50 200.7 161 73.3
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 8.1e-45 184.1 133 79.7
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.1e-37 157.5 100 86.0
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.7e-34 149.8 129 62.8
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 4.1e-33 145.2 131 64.1
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 9.2e-33 144.1 132 56.8
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 9.2e-33 144.1 131 63.4
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.0e-31 140.6 127 61.4
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 2.3e-31 139.4 120 61.7
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 6.6e-31 137.9 111 64.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.1e-30 137.1 122 61.5
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 5.6e-30 134.8 114 62.3
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 7.3e-30 134.4 125 58.4
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 9.6e-30 134.0 143 54.5
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 9.6e-30 134.0 125 57.6
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.2e-29 133.7 131 55.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.6e-29 133.3 109 62.4
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-29 133.3 137 52.6
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 2.8e-29 132.5 125 57.6
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.6e-29 132.1 110 62.7
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 3.6e-29 132.1 154 49.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 4.7e-29 131.7 109 63.3
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 6.2e-29 131.3 101 65.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 6.2e-29 131.3 139 55.4
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 6.2e-29 131.3 113 62.8
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.1e-28 130.6 147 50.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-28 130.6 129 57.4
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.1e-28 130.6 122 54.9
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 1.8e-28 129.8 101 67.3
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.4e-28 129.4 130 56.2
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.4e-28 129.4 118 61.9
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.4e-28 129.4 127 57.5
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.4e-28 129.4 123 58.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 3.1e-28 129.0 98 68.4
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 4.0e-28 128.6 98 66.3
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 5.2e-28 128.3 107 60.7
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 6.8e-28 127.9 103 65.0
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 6.8e-28 127.9 105 62.9
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-27 127.1 98 65.3
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.2e-27 127.1 138 54.3
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.5e-27 126.7 119 59.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.5e-27 126.7 119 58.8
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-27 126.7 98 65.3
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-27 126.7 98 65.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.5e-27 126.7 119 59.7
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.0e-27 126.3 109 59.6
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.0e-27 126.3 101 62.4
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.6e-27 125.9 98 65.3
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.6e-27 125.9 121 58.7
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.6e-27 125.9 135 49.6
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 3.4e-27 125.6 123 57.7
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 3.4e-27 125.6 87 73.6
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 4.4e-27 125.2 121 55.4
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 5.8e-27 124.8 125 53.6
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 7.6e-27 124.4 130 57.7
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.3e-26 123.6 118 60.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.2e-26 122.9 104 59.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.2e-26 122.9 96 64.6
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 2.9e-26 122.5 124 53.2
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 2.9e-26 122.5 147 49.0
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 2.9e-26 122.5 101 62.4
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 4.9e-26 121.7 136 50.7
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 4.9e-26 121.7 122 57.4
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 8.4e-26 120.9 122 51.6
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 8.4e-26 120.9 104 64.4
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 8.4e-26 120.9 132 53.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.4e-25 120.2 104 62.5
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.9e-25 119.8 145 48.3
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 4.2e-25 118.6 101 56.4
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 4.2e-25 118.6 101 57.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 4.2e-25 118.6 101 57.4
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 4.2e-25 118.6 116 56.0
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 5.4e-25 118.2 126 49.2
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.2e-24 117.1 107 56.1
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.1e-24 116.3 101 56.4
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.7e-24 115.9 114 56.1
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.7e-24 115.9 117 54.7
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.5e-24 115.5 98 59.2
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 4.6e-24 115.2 126 52.4
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 7.8e-24 114.4 124 49.2
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 7.8e-24 114.4 121 48.8
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.0e-23 114.0 120 50.8
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-23 113.6 127 51.2
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-23 112.8 110 54.5
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.0e-23 112.5 115 53.0
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 6.6e-23 111.3 114 50.9
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 8.7e-23 110.9 113 53.1
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.3e-22 109.0 95 58.9
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 4.3e-22 108.6 104 61.5
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 5.6e-22 108.2 78 69.2
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 9.6e-22 107.5 84 66.7
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.3e-21 107.1 107 52.3
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.8e-21 105.9 86 60.5
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 8.1e-21 104.4 103 52.4
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 5.3e-20 101.7 112 53.6
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.5e-19 100.1 97 50.5
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.4e-19 99.0 161 41.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-19 98.2 122 41.0
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 5.8e-19 98.2 84 59.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 9.9e-19 97.4 124 44.4
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 4.2e-17 92.0 96 46.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-17 91.3 127 45.7
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 1.7e-15 86.7 71 64.8
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.0e-15 85.9 59 71.2
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.1e-14 84.0 111 39.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 5.6e-14 81.6 90 43.3
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 9.6e-14 80.9 105 44.8
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 5.3e-12 75.1 88 42.0


User provided reference genes

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