Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021956 Solanum tuberosum HOM05D001309 ORTHO05D000385 2.8e-91 338.6 166 100.0
PGSC0003DMG400004327 Solanum tuberosum HOM05D001309 ORTHO05D000385 3.2e-31 139.0 105 66.7
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 6.0e-30 134.8 70 85.7
Sopen08g010550 Solanum pennellii HOM05D001309 ORTHO05D000385 2.5e-23 112.8 60 85.0
CAN.G739.1 Capsicum annuum HOM05D001309 ORTHO05D000385 3.9e-21 105.5 82 62.2
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 1.1e-15 87.4 66 59.1
CSS0013398 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.4e-13 80.5 61 55.7
PGSC0003DMG400030020 Solanum tuberosum HOM05D012424 ORTHO05D014551 2.3e-13 79.7 54 64.8
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 7.4e-12 74.7 73 46.6
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 9.7e-12 74.3 69 49.3
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-11 73.2 70 48.6
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.4e-10 70.5 107 39.3
Rhsim11G0013700 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.1e-10 69.3 68 47.1
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.1e-10 68.9 69 44.9
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-10 68.9 69 47.8
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.4e-09 65.9 61 44.3
MBI09_g41430_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-09 65.5 63 44.4
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 4.5e-09 65.5 60 46.7
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 1.3e-08 63.9 67 44.8
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-08 63.5 61 41.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.7e-08 63.5 65 43.1
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-08 63.5 61 42.6
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.2e-08 63.2 63 41.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-08 62.8 59 49.2
MBI17_g42351_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.0e-08 62.0 70 40.0
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.5e-08 61.2 62 40.3
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.5e-08 61.2 59 42.4
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.8 77 40.3
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.8 59 44.1
Cc00_g05340 Coffea canephora HOM05D005012 ORTHO05D005886 1.9e-07 60.1 82 36.6
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 60.1 59 42.4
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 60.1 62 40.3
Rhsim13G0228900 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.2e-07 59.3 61 44.3
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.2e-07 58.9 61 39.3
GSVIVG01022651001 Vitis vinifera HOM05D008595 ORTHO05D000385 4.2e-07 58.9 78 33.3
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 5.5e-07 58.5 56 48.2
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.5e-07 58.5 59 40.7
Nn7g36848 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.2e-07 58.2 60 41.7
RcHm_v2.0_Chr1g0322131 Rosa chinensis HOM05D005012 ORTHO05D005886 7.2e-07 58.2 70 35.7
Dinv19999 Davidia involucrata HOM05D010146 ORTHO05D000385 1.2e-06 57.4 69 39.1
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-06 57.0 61 37.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.1e-06 56.6 56 46.4
Prupe.1G266100 Prunus persica HOM05D005012 ORTHO05D000385 2.1e-06 56.6 72 36.1
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 2.1e-06 56.6 72 36.1
CSS0024121 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 4.7e-06 55.5 45 48.9
CSS0038787 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 4.7e-06 55.5 45 48.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-06 55.5 76 39.5
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-06 54.7 71 39.4
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-06 54.7 61 36.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 7.9e-06 54.7 56 48.2


User provided reference genes

Program Settings