Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 8.5e-142 506.9 242 100.0
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 1.4e-128 463.0 242 93.0
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 5.9e-127 457.6 238 93.3
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.8e-106 387.9 238 76.5
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.7e-102 376.3 227 76.7
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.1e-101 373.6 219 78.5
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 9.6e-69 264.2 225 55.6
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.8e-67 260.0 229 54.1
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 9.0e-67 257.7 225 56.0
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 4.5e-66 255.4 221 54.8
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 5.8e-66 255.0 217 54.8
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 5.8e-66 255.0 228 52.6
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.9e-64 250.0 228 53.9
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.2e-63 247.3 222 55.0
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 3.5e-63 245.7 226 52.2
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 7.9e-63 244.6 227 52.9
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.0e-62 244.2 217 52.1
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.5e-61 239.6 223 50.2
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.5e-61 239.6 220 50.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 1.3e-60 237.3 217 52.1
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.3e-60 237.3 223 50.7
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 1.6e-60 236.9 220 48.2
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 2.1e-60 236.5 216 52.8
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.8e-60 235.3 223 50.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 8.2e-60 234.6 218 53.2
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.1e-59 234.2 220 51.8
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 1.8e-59 233.4 218 52.8
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 1.8e-59 233.4 235 51.1
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 9.0e-59 231.1 217 51.6
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.5e-58 230.3 226 49.6
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 1.5e-58 230.3 219 53.0
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 4.5e-58 228.8 223 48.9
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 4.5e-58 228.8 219 52.5
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.0e-57 227.6 222 50.5
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.7e-57 226.9 221 47.5
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 5.0e-57 225.3 134 79.1
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 5.0e-57 225.3 231 47.6
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 6.5e-57 224.9 217 51.6
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 8.4e-57 224.6 220 48.2
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.1e-56 224.2 229 48.5
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.9e-56 223.4 219 49.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.9e-56 223.4 220 51.8
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 5.5e-56 221.9 222 48.2
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 7.2e-56 221.5 218 51.4
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 9.3e-56 221.1 226 50.0
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 3.5e-55 219.2 222 48.2
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 3.5e-55 219.2 219 48.9
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 3.5e-55 219.2 217 49.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 4.6e-55 218.8 214 50.0
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 7.9e-55 218.0 225 49.8
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.8e-54 216.9 231 45.5
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 2.3e-54 216.5 222 46.8
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 5.1e-54 215.3 224 50.4
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 1.1e-53 214.2 215 50.2
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 1.5e-53 213.8 223 45.7
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.9e-53 213.4 227 44.9
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.3e-53 212.6 186 54.3
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.3e-53 212.6 218 48.2
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 4.3e-53 212.2 225 48.4
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 4.3e-53 212.2 219 48.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 5.7e-53 211.8 226 46.0
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 9.7e-53 211.1 218 48.2
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.3e-52 210.7 219 46.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 3.7e-52 209.1 233 42.9
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.4e-51 207.2 217 47.0
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-51 207.2 246 44.3
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 3.1e-51 206.1 232 45.7
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.2e-50 204.1 268 40.7
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.0e-50 203.4 221 43.0
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 2.0e-50 203.4 221 45.2
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 4.5e-50 202.2 214 46.7
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.3e-49 200.7 215 46.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 3.8e-49 199.1 226 45.1
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.8e-49 199.1 215 45.1
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 5.0e-49 198.7 224 45.5
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 1.9e-48 196.8 218 46.8
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 5.5e-48 195.3 218 45.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.5e-48 195.3 132 65.2
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 2.1e-47 193.4 216 44.9
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 2.7e-47 193.0 217 44.7
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 5.1e-46 188.7 224 44.6
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 6.7e-46 188.3 230 43.5
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 8.8e-46 188.0 217 42.9
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 5.7e-45 185.3 218 44.5
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 3.7e-44 182.6 166 53.6
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 1.4e-43 180.6 228 40.4
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.1e-43 179.5 144 59.7
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.2e-39 167.5 178 45.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 6.7e-38 161.8 172 52.3
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.1e-37 161.0 220 37.7
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.0e-37 160.2 162 47.5
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 2.2e-36 156.8 217 36.9
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.8e-36 156.4 256 35.5
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.9e-33 146.4 215 36.7
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.2e-31 141.0 189 37.0
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 4.0e-30 136.0 103 60.2
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 3.7e-28 129.4 201 33.8
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 7.7e-26 121.7 126 44.4
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.5e-24 117.5 206 33.5
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.5e-21 107.5 149 40.3
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.7e-17 94.0 147 36.7
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 6.5e-17 92.0 93 44.1
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 5.5e-16 89.0 119 37.0
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.4e-14 84.3 105 37.1
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 5.2e-14 82.4 64 62.5
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 7.5e-13 78.6 134 38.1
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 9.2e-11 71.6 95 32.6
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 3.5e-10 69.7 94 41.5
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 2.9e-09 66.6 94 39.4
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.6e-07 59.7 64 39.1
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 5.2e-06 55.8 104 31.7


User provided reference genes

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