Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021884 Solanum tuberosum HOM05D010760 ORTHO05D014669 2.2e-97 359.0 188 100.0
Solyc01g010215.1 Solanum lycopersicum HOM05D010760 ORTHO05D014669 6.8e-46 188.0 199 56.8
Solyc01g010185.1 Solanum lycopersicum HOM05D010760 ORTHO05D014669 2.9e-36 156.0 191 49.7
Sopen01g005810 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-34 149.4 188 51.1
Nitab4.5_0000509g0050 Nicotiana tabacum HOM05D010760 ORTHO05D014669 1.2e-26 124.0 184 44.6
Nitab4.5_0001118g0110 Nicotiana tabacum HOM05D010760 ORTHO05D014669 3.9e-25 119.0 105 60.0
PGSC0003DMG400021883 Solanum tuberosum HOM05D010760 ORTHO05D014669 1.5e-24 117.1 149 50.3
Nitab4.5_0000509g0070 Nicotiana tabacum HOM05D010760 ORTHO05D014669 1.9e-24 116.7 101 58.4
Peaxi162Scf00026g00083 Petunia axillaris HOM05D010760 ORTHO05D014669 8.1e-23 111.3 139 46.0
Solyc01g010220.3 Solanum lycopersicum HOM05D010760 ORTHO05D014669 1.4e-22 110.5 139 48.2
PGSC0003DMG400021886 Solanum tuberosum HOM05D010760 ORTHO05D014669 6.4e-20 101.7 145 47.6
Sopen01g005790 Solanum pennellii HOM05D010760 ORTHO05D014669 1.4e-19 100.5 143 44.8
Peaxi162Scf00026g00913 Petunia axillaris HOM05D010760 ORTHO05D014669 7.1e-19 98.2 135 44.4
Sopen01g005820 Solanum pennellii HOM05D010760 ORTHO05D014669 1.0e-17 94.4 120 45.8
Sopen01g005800 Solanum pennellii HOM05D010760 ORTHO05D014669 1.7e-17 93.6 125 47.2
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.9e-16 90.1 111 46.8
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 3.6e-15 85.9 110 44.5
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 4.8e-15 85.5 85 51.8
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.8e-14 83.6 85 48.2
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 9.0e-14 81.3 90 47.8
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 1.2e-13 80.9 114 43.0
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 1.2e-13 80.9 90 48.9
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 2.6e-13 79.7 111 44.1
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 9.9e-13 77.8 106 42.5
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 1.7e-12 77.0 104 42.3
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 2.9e-12 76.3 90 46.7
Nitab4.5_0000498g0210 Nicotiana tabacum HOM05D002833 ORTHO05D000001 4.9e-12 75.5 90 47.8
Nitab4.5_0003766g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 6.4e-12 75.1 90 45.6
Nitab4.5_0000523g0100 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.2e-11 72.8 71 54.9
Solyc02g061920.2 Solanum lycopersicum HOM05D002833 ORTHO05D003210 3.2e-11 72.8 100 36.0
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 3.2e-11 72.8 100 36.0
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 3.2e-11 72.8 100 36.0
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.8 100 36.0
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 9.3e-11 71.2 77 49.4
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 9.3e-11 71.2 100 36.0
ECA240G2389 Erigeron canadensis HOM05D000002 ORTHO05D003210 2.7e-10 69.7 83 44.6
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-10 68.9 104 38.5
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-10 68.9 104 38.5
Psat6g037960 Pisum sativum HOM05D008404 ORTHO05D000001 1.0e-09 67.8 103 38.8
AUR62023882 Chenopodium quinoa HOM05D002833 ORTHO05D003210 2.3e-09 66.6 100 35.0
Lalb_Chr09g0335481 Lupinus albus HOM05D002833 ORTHO05D003210 3.9e-09 65.9 85 41.2
ECA233G3435 Erigeron canadensis HOM05D002833 ORTHO05D003210 5.1e-09 65.5 85 41.2
HanXRQChr02g0054271 Helianthus annuus HOM05D002833 ORTHO05D003210 1.5e-08 63.9 90 40.0
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.5e-08 63.2 91 38.5
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 2.5e-08 63.2 94 37.2
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 2.5e-08 63.2 64 53.1
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 7.4e-08 61.6 95 37.9
Nitab4.5_0000061g0370 Nicotiana tabacum HOM05D002833 ORTHO05D000001 7.4e-08 61.6 93 41.9
Nitab4.5_0007140g0030 Nicotiana tabacum HOM05D010760 ORTHO05D000001 7.4e-08 61.6 79 38.0
Sopen02g005450 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-08 61.2 91 38.5
HanXRQChr17g0552671 Helianthus annuus HOM05D002833 ORTHO05D003210 1.6e-07 60.5 105 34.3
Lalb_Chr13g0290791 Lupinus albus HOM05D002833 ORTHO05D003210 3.7e-07 59.3 88 37.5
AUR62012079 Chenopodium quinoa HOM05D000193 ORTHO05D003210 6.2e-07 58.5 85 36.5
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.2e-07 58.5 85 35.3
HanXRQChr08g0213721 Helianthus annuus HOM05D000061 ORTHO05D003210 1.1e-06 57.8 74 36.5
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 1.1e-06 57.8 117 32.5
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 1.1e-06 57.8 116 32.8
VMungo0464G1997 Vigna mungo HOM05D002833 ORTHO05D003210 1.1e-06 57.8 120 30.8
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-06 57.4 101 32.7
Ah.14g080650 Amaranthus hybridus HOM05D002833 ORTHO05D003210 1.8e-06 57.0 93 33.3
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 1.8e-06 57.0 90 35.6
EL10Ac1g02212 Beta vulgaris HOM05D002833 ORTHO05D003210 1.8e-06 57.0 70 40.0
AUR62033479 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.8e-06 57.0 95 35.8
AUR62037648 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.8e-06 57.0 70 40.0
ECA236G0516 Erigeron canadensis HOM05D002833 ORTHO05D003210 1.8e-06 57.0 85 38.8
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 2.4e-06 56.6 85 35.3
AUR62024333 Chenopodium quinoa HOM05D002833 ORTHO05D003210 3.1e-06 56.2 112 31.2
Sopen05g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-06 56.2 107 32.7
Ah.03g148010 Amaranthus hybridus HOM05D002833 ORTHO05D003210 5.3e-06 55.5 95 33.7
PGSC0003DMG400021882 Solanum tuberosum HOM05D042358 ORTHO05D037689 6.9e-06 55.1 113 38.9


User provided reference genes

Program Settings