Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021523 Solanum tuberosum HOM05D013140 ORTHO05D013551 6.9e-162 573.9 293 100.0
Solyc04g077910.1 Solanum lycopersicum HOM05D013140 ORTHO05D013551 2.0e-105 386.3 259 77.6
Solyc04g077890.1 Solanum lycopersicum HOM05D013140 ORTHO05D013551 2.9e-67 259.6 265 58.1
Sopen04g031500 Solanum pennellii HOM05D013140 ORTHO05D013551 3.9e-64 249.2 231 60.2
PGSC0003DMG400021522 Solanum tuberosum HOM05D013140 ORTHO05D013551 6.8e-61 238.4 404 42.6
PGSC0003DMG400021521 Solanum tuberosum HOM05D013140 ORTHO05D013551 7.8e-57 224.9 259 53.7
Sopen04g031510 Solanum pennellii HOM05D013140 ORTHO05D013551 6.2e-54 215.3 231 54.5
Sopen04g031490 Solanum pennellii HOM05D013140 ORTHO05D013551 1.2e-52 211.1 214 58.9
CAN.G724.14 Capsicum annuum HOM05D013140 ORTHO05D013551 4.2e-50 202.6 267 48.7
CAN.G724.15 Capsicum annuum HOM05D013140 ORTHO05D013551 9.3e-42 174.9 272 43.4
PGSC0003DMG400037046 Solanum tuberosum HOM05D013140 ORTHO05D013551 2.1e-33 147.1 207 45.4
CAN.G724.16 Capsicum annuum HOM05D000231 ORTHO05D013551 6.7e-16 89.0 194 34.0
PGSC0003DMG400021520 Solanum tuberosum HOM05D000231 ORTHO05D013551 5.3e-13 79.3 132 37.9
Nitab4.5_0007805g0010 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.2e-12 78.2 248 30.6
CAN.G193.13 Capsicum annuum HOM05D000231 ORTHO05D013551 2.2e-11 73.9 209 30.6
Solyc04g077880.1 Solanum lycopersicum HOM05D000231 ORTHO05D013551 2.9e-11 73.6 137 36.5
Sopen04g031480 Solanum pennellii HOM05D000231 ORTHO05D013551 3.8e-11 73.2 137 35.8
Peaxi162Scf00600g00024 Petunia axillaris HOM05D000231 ORTHO05D000132 7.2e-10 68.9 138 37.7
CAN.G193.11 Capsicum annuum HOM05D013140 ORTHO05D013551 3.6e-09 66.6 92 41.3
Nitab4.5_0000114g0060 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.0e-08 65.1 134 36.6
Oeu014271.1 Olea europaea HOM05D000231 ORTHO05D000132 8.8e-08 62.0 143 31.5
VMungo1309G0586 Vigna mungo HOM05D000231 ORTHO05D000132 1.5e-07 61.2 135 30.4
Actinidia10194 Actinidia chinensis HOM05D000231 ORTHO05D000132 9.7e-07 58.5 221 28.5
Oeu025661.1 Olea europaea HOM05D000231 ORTHO05D000132 1.3e-06 58.2 176 26.7
Phvul.009G071400 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 1.3e-06 58.2 135 28.9
Lj1g0005396 Lotus japonicus HOM05D000231 ORTHO05D000132 2.2e-06 57.4 138 31.9
Actinidia22691 Actinidia chinensis HOM05D000231 ORTHO05D000132 2.8e-06 57.0 183 27.9
Glyma.06G046200 Glycine max HOM05D000231 ORTHO05D000132 2.8e-06 57.0 136 28.7
MD08G1085300 Malus domestica HOM05D000231 ORTHO05D000132 3.7e-06 56.6 200 25.5
unitig_0.g1049 Utricularia gibba HOM05D002196 ORTHO05D002565 3.7e-06 56.6 131 29.8
arahy.Tifrunner.gnm1.ann1.2NWJ1Y Arachis hypogaea HOM05D000231 ORTHO05D000132 4.8e-06 56.2 130 31.5
arahy.Tifrunner.gnm1.ann1.43PIBJ Arachis hypogaea HOM05D000231 ORTHO05D000132 4.8e-06 56.2 130 31.5
Dinv44959 Davidia involucrata HOM05D000231 ORTHO05D000132 4.8e-06 56.2 137 29.9
DCAR_008855 Daucus carota HOM05D000231 ORTHO05D000132 6.3e-06 55.8 134 30.6
Potri.002G119000 Populus trichocarpa HOM05D000231 ORTHO05D000132 6.3e-06 55.8 252 23.8
arahy.Tifrunner.gnm1.ann1.V78EF7 Arachis hypogaea HOM05D000231 ORTHO05D000132 8.2e-06 55.5 134 30.6
Nitab4.5_0000164g0120 Nicotiana tabacum HOM05D000231 ORTHO05D000132 8.2e-06 55.5 190 30.5


User provided reference genes

Program Settings