Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021518 Solanum tuberosum HOM05D004532 ORTHO05D000028 1.6e-76 289.3 137 100.0
Solyc04g078300.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 3.8e-70 268.1 137 92.7
Sopen04g031890 Solanum pennellii HOM05D000042 ORTHO05D000028 1.1e-69 266.5 137 92.0
CAN.G1054.7 Capsicum annuum HOM05D000042 ORTHO05D000028 1.7e-62 242.7 141 83.7
Peaxi162Scf00848g00319 Petunia axillaris HOM05D004532 ORTHO05D000028 6.0e-60 234.2 142 81.0
Nitab4.5_0000934g0190 Nicotiana tabacum HOM05D000042 ORTHO05D000028 2.0e-55 219.2 146 79.5
Nitab4.5_0007275g0010 Nicotiana tabacum HOM05D000042 ORTHO05D000028 5.8e-55 217.6 145 78.6
Migut.C00517 Erythranthe guttata HOM05D000042 ORTHO05D000028 7.2e-29 131.0 138 54.3
Oeu061838.1 Olea europaea HOM05D000042 ORTHO05D000028 6.1e-28 127.9 138 55.1
MSTRG.1048 Avicennia marina HOM05D000042 ORTHO05D000028 6.7e-27 124.4 123 56.1
Dinv35909 Davidia involucrata HOM05D001837 ORTHO05D000028 3.8e-22 108.6 121 48.8
Actinidia38089 Actinidia chinensis HOM05D000042 ORTHO05D000028 1.2e-20 103.6 116 47.4
Hma1.2p1_0923F.1_g237150 Hydrangea macrophylla HOM05D000042 ORTHO05D000028 2.7e-20 102.4 129 42.6
Thecc.08G094200 Theobroma cacao HOM05D004532 ORTHO05D000028 1.4e-19 100.1 122 43.4
Oeu040891.2 Olea europaea HOM05D000042 ORTHO05D000028 6.8e-19 97.8 125 45.6
Duzib116G0629 Durio zibethinus HOM05D004532 ORTHO05D000028 8.8e-19 97.4 123 45.5
Haze_18093 Corylus avellana HOM05D004532 ORTHO05D000028 1.5e-18 96.7 130 46.9
GSVIVG01009393001 Vitis vinifera HOM05D001837 ORTHO05D000028 2.0e-18 96.3 120 45.0
TAR625G1000 Trochodendron aralioides HOM05D001837 ORTHO05D000028 2.6e-18 95.9 118 46.6
Manes.18G043300 Manihot esculenta HOM05D000042 ORTHO05D000028 5.7e-18 94.7 116 44.8
Lj4A761T86 Lonicera japonica HOM05D004532 ORTHO05D000028 2.8e-17 92.4 150 41.3
Ciclev10001730m.g Citrus clementina HOM05D001837 ORTHO05D000028 1.1e-16 90.5 124 44.4
Gohir.D02G089900 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.7e-12 75.1 141 39.0
Gorai.005G100600 Gossypium raimondii HOM05D000042 ORTHO05D000028 2.3e-11 72.8 141 38.3
Lsat_1_v5_gn_6_109820 Lactuca sativa HOM05D001837 ORTHO05D000028 6.8e-11 71.2 129 32.6
QL02p002913 Quercus lobata HOM05D004532 ORTHO05D000028 8.8e-11 70.9 92 44.6
CiPaw.15G048700 Carya illinoinensis HOM05D000042 ORTHO05D000028 3.4e-10 68.9 137 38.0
COL.COLO4_28564 Corchorus olitorius HOM05D000021 ORTHO05D000028 7.5e-10 67.8 100 44.0
Actinidia08265 Actinidia chinensis HOM05D001837 ORTHO05D000028 2.8e-09 65.9 59 52.5
SGA_v2.0_scaffold26G11297 Striga asiatica HOM05D000042 ORTHO05D000028 1.1e-08 63.9 109 43.1
Cc10_g05320 Coffea canephora HOM05D001837 ORTHO05D000028 4.1e-08 62.0 118 34.7
Cfa018031 Carpinus fangiana HOM05D004532 ORTHO05D000028 7.0e-08 61.2 111 38.7
HanXRQChr15g0483111 Helianthus annuus HOM05D001837 ORTHO05D000028 2.7e-07 59.3 124 30.6
Potri.014G021000 Populus trichocarpa HOM05D004532 ORTHO05D000028 1.3e-06 57.0 83 42.2
Prupe.1G427500 Prunus persica HOM05D000042 ORTHO05D000028 2.3e-06 56.2 109 35.8


User provided reference genes

Program Settings