Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.3e-60 235.3 117 100.0
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 6.3e-58 227.3 117 96.6
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.8e-57 225.7 117 96.6
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.5e-43 177.2 121 79.3
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.4e-35 151.8 115 67.8
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.8e-34 148.7 106 78.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.1e-33 144.8 115 67.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 4.1e-33 144.8 114 68.4
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.4e-33 144.4 114 64.0
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.2e-32 143.3 114 64.9
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 2.0e-32 142.5 115 61.7
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 2.0e-32 142.5 114 66.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 3.5e-32 141.7 113 65.5
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 7.8e-32 140.6 113 63.7
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.7e-31 139.4 105 71.4
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.7e-31 139.4 112 67.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-31 138.7 114 66.7
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 3.8e-31 138.3 115 64.3
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.8e-31 138.3 115 64.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.8e-31 138.3 116 64.7
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 3.8e-31 138.3 115 62.6
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 5.0e-31 137.9 114 61.4
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 8.6e-31 137.1 115 63.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.1e-30 136.7 115 63.5
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.5e-30 136.3 116 60.3
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.9e-30 136.0 113 62.8
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.5e-30 135.6 115 61.7
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.5e-30 135.6 112 63.4
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.3e-30 135.2 115 62.6
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 4.3e-30 134.8 115 61.7
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 4.3e-30 134.8 116 62.1
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 5.6e-30 134.4 115 60.0
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.6e-30 134.4 113 60.2
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 7.3e-30 134.0 115 58.3
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 9.5e-30 133.7 115 60.9
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.6e-29 132.9 115 57.4
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 1.6e-29 132.9 115 60.0
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 2.1e-29 132.5 115 60.0
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.1e-29 132.5 112 62.5
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.8e-29 132.1 112 59.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.8e-29 132.1 115 61.7
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 3.6e-29 131.7 115 59.1
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 3.6e-29 131.7 115 59.1
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 3.6e-29 131.7 115 64.3
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 3.6e-29 131.7 115 60.0
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.6e-29 131.7 113 64.6
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.7e-29 131.3 115 60.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.7e-29 131.3 115 60.9
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 6.1e-29 131.0 115 60.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 6.1e-29 131.0 113 60.2
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.0e-28 130.2 115 59.1
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.4e-28 129.8 116 58.6
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-28 129.8 115 60.0
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 1.4e-28 129.8 115 60.9
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.8e-28 129.4 112 60.7
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 3.0e-28 128.6 115 59.1
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 3.0e-28 128.6 112 62.5
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.0e-28 128.6 113 59.3
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.0e-28 128.6 114 60.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 4.0e-28 128.3 115 59.1
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 4.0e-28 128.3 112 58.9
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 5.2e-28 127.9 114 60.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 5.2e-28 127.9 112 61.6
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 5.2e-28 127.9 115 58.3
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 5.2e-28 127.9 115 58.3
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 6.8e-28 127.5 118 55.1
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.8e-28 127.5 112 60.7
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.2e-27 126.7 115 52.2
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.2e-27 126.7 118 55.1
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.5e-27 126.3 112 58.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 2.0e-27 125.9 111 58.6
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.0e-27 125.9 105 62.9
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 2.0e-27 125.9 115 57.4
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 2.0e-27 125.9 111 56.8
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.6e-27 125.6 115 58.3
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.6e-27 125.6 115 58.3
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 3.4e-27 125.2 115 55.7
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.4e-27 125.2 112 57.1
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.4e-27 125.2 115 58.3
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 4.4e-27 124.8 113 58.4
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.3e-26 123.2 113 58.4
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.2e-26 122.5 116 51.7
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 2.2e-26 122.5 105 61.0
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 2.2e-26 122.5 116 51.7
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.2e-26 122.5 112 58.9
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.9e-26 122.1 118 51.7
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.9e-26 122.1 118 51.7
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.9e-26 122.1 118 51.7
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 2.9e-26 122.1 113 57.5
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.9e-26 122.1 112 58.9
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.9e-26 122.1 115 53.0
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.9e-26 121.3 118 51.7
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 4.9e-26 121.3 112 56.2
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.1e-25 120.2 121 48.8
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.4e-25 119.0 111 57.7
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.2e-25 118.6 116 49.1
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 5.4e-25 117.9 118 50.8
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.2e-24 116.7 113 54.0
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.2e-24 116.7 115 51.3
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.0e-24 115.9 112 57.1
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 2.7e-24 115.5 122 51.6
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 4.6e-24 114.8 115 53.0
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 6.0e-24 114.4 106 57.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 7.8e-24 114.0 111 55.0
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.3e-23 113.2 102 55.9
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.7e-23 112.8 115 52.2
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.7e-23 112.8 115 46.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 6.6e-23 110.9 111 55.9
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 6.6e-23 110.9 114 52.6
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 8.6e-23 110.5 116 48.3
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 1.9e-22 109.4 115 48.7
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.5e-22 109.0 105 55.2
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.3e-22 108.6 114 52.6
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.2e-21 106.7 115 47.0
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.6e-21 106.3 105 55.2
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 2.1e-21 105.9 118 47.5
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 2.1e-21 105.9 118 47.5
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 3.6e-21 105.1 100 56.0
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 4.7e-21 104.8 115 48.7
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 1.4e-20 103.2 118 46.6
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.3e-20 102.4 115 47.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 8.9e-20 100.5 113 48.7
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 2.6e-19 99.0 112 53.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 3.4e-19 98.6 115 46.1
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.7e-15 86.3 67 71.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 3.3e-14 82.0 89 53.9
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.4e-09 65.9 67 56.7
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 7.8e-08 60.8 55 61.8
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 8.6e-07 57.4 60 46.7


User provided reference genes

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