Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021498 Solanum tuberosum HOM05D000492 ORTHO05D022076 1.9e-35 152.1 86 100.0
Solyc01g056830.3 Solanum lycopersicum HOM05D000492 ORTHO05D022076 5.9e-21 104.0 53 92.5
Sopen01g025910 Solanum pennellii HOM05D000492 ORTHO05D000499 7.7e-21 103.6 54 90.7
Peaxi162Scf00060g01215 Petunia axillaris HOM05D000492 ORTHO05D000499 5.0e-20 100.9 54 87.0
Nitab4.5_0006454g0030 Nicotiana tabacum HOM05D000492 ORTHO05D000499 5.5e-19 97.4 54 87.0
Nitab4.5_0008653g0040 Nicotiana tabacum HOM05D000492 ORTHO05D022076 2.7e-18 95.1 54 85.2
Nitab4.5_0004274g0010 Nicotiana tabacum HOM05D000492 ORTHO05D000499 5.2e-17 90.9 51 82.4
CAN.G128.156 Capsicum annuum HOM05D000492 ORTHO05D000499 3.4e-16 88.2 54 79.6
Solyc10g081580.3 Solanum lycopersicum HOM05D000492 ORTHO05D000499 5.7e-16 87.4 54 79.6
Sopen10g032090 Solanum pennellii HOM05D000492 ORTHO05D000499 5.7e-16 87.4 54 79.6
PGSC0003DMG400028128 Solanum tuberosum HOM05D000492 ORTHO05D000499 5.7e-16 87.4 54 79.6
Dinv11920 Davidia involucrata HOM05D000492 ORTHO05D000499 4.2e-11 71.2 54 68.5
Cc06_g07160 Coffea canephora HOM05D000492 ORTHO05D022076 7.2e-11 70.5 54 64.8
CiPaw.10G126600 Carya illinoinensis HOM05D000492 ORTHO05D000499 1.6e-10 69.3 54 64.8
TAR258G0001 Trochodendron aralioides HOM05D000492 ORTHO05D000499 4.7e-10 67.8 53 66.0
TAR369G0589 Trochodendron aralioides HOM05D000492 ORTHO05D000499 4.7e-10 67.8 53 66.0
Dinv25094 Davidia involucrata HOM05D000492 ORTHO05D000499 6.1e-10 67.4 54 64.8
TWI60G1190 Tripterygium wilfordii HOM05D000492 ORTHO05D000499 1.0e-09 66.6 53 64.2
TWI32G0387 Tripterygium wilfordii HOM05D000492 ORTHO05D000499 1.4e-09 66.2 53 64.2
MSTRG.10425 Avicennia marina HOM05D000492 ORTHO05D000499 1.8e-09 65.9 54 63.0
Rhsim03G0055600 Rhododendron simsii HOM05D000492 ORTHO05D000499 2.3e-09 65.5 54 66.7
Rhsim03G0056600 Rhododendron simsii HOM05D000492 ORTHO05D000499 2.3e-09 65.5 54 66.7
vmacro07537 Vaccinium macrocarpon HOM05D000492 ORTHO05D000499 2.3e-09 65.5 51 64.7
CSS0014651 Camellia sinensis var. sinensis HOM05D000492 ORTHO05D000499 8.9e-09 63.5 54 66.7
Actinidia03953 Actinidia chinensis HOM05D000492 ORTHO05D000499 1.2e-08 63.2 54 66.7
MD14G1004100 Malus domestica HOM05D000492 ORTHO05D000499 1.2e-08 63.2 53 60.4
Oeu063099.1 Olea europaea HOM05D000495 ORTHO05D000499 1.2e-08 63.2 45 66.7
QL07p018899 Quercus lobata HOM05D000492 ORTHO05D000499 1.2e-08 63.2 54 61.1
Eucgr.A02112 Eucalyptus grandis HOM05D000492 ORTHO05D000499 1.5e-08 62.8 53 62.3
MBI17_g38208_MAGBIO Magnolia biondii HOM05D000492 ORTHO05D000499 1.5e-08 62.8 53 62.3
MSTRG.26566 Avicennia marina HOM05D000492 ORTHO05D000499 2.0e-08 62.4 54 59.3
FAN23G0709 Fragaria x ananassa HOM05D000492 ORTHO05D000499 2.0e-08 62.4 53 62.3
Cpa.g.sc51.144 Carica papaya HOM05D000492 ORTHO05D000499 2.6e-08 62.0 53 60.4
CANSAT78G1369 Cannabis sativa HOM05D000492 ORTHO05D000499 3.4e-08 61.6 53 58.5
ECA248G3176 Erigeron canadensis HOM05D000492 ORTHO05D000499 3.4e-08 61.6 54 61.1
HanXRQChr01g0026321 Helianthus annuus HOM05D000492 ORTHO05D000499 3.4e-08 61.6 54 61.1
HanXRQChr11g0347901 Helianthus annuus HOM05D000492 ORTHO05D000499 3.4e-08 61.6 54 61.1
PGR042G1856 Punica granatum HOM05D000492 ORTHO05D000499 5.7e-08 60.8 53 58.5
Migut.L01861 Erythranthe guttata HOM05D000492 ORTHO05D000499 9.8e-08 60.1 54 57.4
SGA_v2.0_scaffold392G50666 Striga asiatica HOM05D000492 ORTHO05D000499 9.8e-08 60.1 52 51.9
Nn5g27630 Nelumbo nucifera HOM05D000492 ORTHO05D000499 1.3e-07 59.7 53 60.4
RcHm_v2.0_Chr3g0496741 Rosa chinensis HOM05D000492 ORTHO05D000499 1.3e-07 59.7 53 60.4
SGA_v2.0_scaffold112G31668 Striga asiatica HOM05D000492 ORTHO05D000499 1.3e-07 59.7 54 57.4
Prupe.7G006600 Prunus persica HOM05D000492 ORTHO05D000499 1.7e-07 59.3 53 58.5
Sc01g0005160 Simmondsia chinensis HOM05D000492 ORTHO05D000499 1.7e-07 59.3 54 57.4
Duzib177G0386 Durio zibethinus HOM05D000492 ORTHO05D000499 2.2e-07 58.9 54 59.3
SGA_v2.0_scaffold41G15784 Striga asiatica HOM05D000492 ORTHO05D000499 2.2e-07 58.9 45 60.0
HPP92_017664 Vanilla planifolia HOM05D000492 ORTHO05D000499 2.2e-07 58.9 53 56.6
MD12G1006500 Malus domestica HOM05D000492 ORTHO05D000499 2.8e-07 58.5 53 60.4
Nitab4.5_0000117g0130 Nicotiana tabacum HOM05D000492 ORTHO05D000499 2.8e-07 58.5 28 96.4
HPP92_015648 Vanilla planifolia HOM05D000492 ORTHO05D000499 2.8e-07 58.5 53 56.6
Lsat_1_v5_gn_9_39661 Lactuca sativa HOM05D000492 ORTHO05D000499 3.7e-07 58.2 54 57.4
THA.LOC104805769 Tarenaya hassleriana HOM05D000492 ORTHO05D000499 3.7e-07 58.2 54 55.6
Thecc.05G247500 Theobroma cacao HOM05D000492 ORTHO05D000499 3.7e-07 58.2 54 59.3
COL.COLO4_32993 Corchorus olitorius HOM05D000492 ORTHO05D000499 4.9e-07 57.8 54 59.3
Haze_20482 Corylus avellana HOM05D000492 ORTHO05D000499 4.9e-07 57.8 54 59.3
ATR0697G086 Amborella trichopoda HOM05D000492 ORTHO05D000499 8.3e-07 57.0 53 56.6
Ciclev10021315m.g Citrus clementina HOM05D000492 ORTHO05D000499 8.3e-07 57.0 54 57.4
FvH4_1g28350 Fragaria vesca HOM05D000492 ORTHO05D000499 8.3e-07 57.0 56 58.9
FAN19G2281 Fragaria x ananassa HOM05D000492 ORTHO05D000499 8.3e-07 57.0 56 58.9
Sed0018996 Sechium edule HOM05D000492 ORTHO05D000499 8.3e-07 57.0 53 58.5
FAN26G0245 Fragaria x ananassa HOM05D000492 ORTHO05D000499 1.1e-06 56.6 45 60.0
GSVIVG01022480001 Vitis vinifera HOM05D000492 ORTHO05D000499 1.1e-06 56.6 53 56.6
CDE10G0198 Ceratophyllum demersum HOM05D000492 ORTHO05D000499 2.4e-06 55.5 53 54.7
Lj2C418T15 Lonicera japonica HOM05D000492 ORTHO05D000499 2.4e-06 55.5 42 69.0
Ca_04479_v3 Cicer arietinum L. HOM05D000492 ORTHO05D000499 5.4e-06 54.3 54 53.7
Duzib128G2030 Durio zibethinus HOM05D000492 ORTHO05D000499 5.4e-06 54.3 54 53.7
TAR633G0022 Trochodendron aralioides HOM05D000492 ORTHO05D000499 7.0e-06 53.9 53 56.6
unitig_85.g27221 Utricularia gibba HOM05D000492 ORTHO05D000499 7.0e-06 53.9 54 53.7
Carub.0006s0697 Capsella rubella HOM05D000492 ORTHO05D000499 9.2e-06 53.5 54 53.7
ClCG10G013540 Citrullus lanatus HOM05D000492 ORTHO05D000499 9.2e-06 53.5 53 56.6


User provided reference genes

Program Settings