Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 0.0e+00 1256.5 637 100.0
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 0.0e+00 1184.1 637 94.8
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 0.0e+00 1171.4 639 93.7
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 1.5e-307 1058.9 640 85.0
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 5.3e-260 901.0 639 74.6
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 1.0e-258 896.7 639 74.3
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 5.2e-239 831.2 637 71.6
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 1.3e-197 693.7 638 57.5
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 3.9e-194 682.2 644 57.6
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 2.5e-185 652.9 662 55.1
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 1.0e-181 641.0 644 55.6
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.4e-175 620.5 644 53.4
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 1.2e-174 617.5 643 53.2
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 1.3e-170 604.0 690 51.3
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 3.1e-167 592.8 643 51.8
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.7e-165 587.0 499 67.1
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 1.9e-164 583.6 639 51.6
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 3.6e-163 579.3 646 51.1
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 8.8e-162 574.7 643 50.5
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 9.7e-161 571.2 648 50.9
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 1.3e-160 570.9 643 50.5
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 2.2e-160 570.1 648 50.2
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 4.1e-159 565.8 642 50.8
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 1.3e-157 560.8 646 50.2
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.1e-156 557.8 639 50.4
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 3.2e-156 556.2 629 49.9
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 1.6e-155 553.9 506 59.5
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 6.1e-155 552.0 645 49.5
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 7.9e-155 551.6 639 49.6
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 1.8e-154 550.4 647 50.2
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 1.5e-153 547.4 641 49.1
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 4.4e-153 545.8 643 49.6
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 2.2e-152 543.5 639 49.1
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 3.7e-152 542.7 658 48.2
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 6.3e-152 542.0 638 48.9
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 8.2e-152 541.6 642 50.9
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 1.1e-151 541.2 637 48.8
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 2.4e-151 540.0 637 49.6
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 3.1e-151 539.7 637 48.7
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 9.1e-151 538.1 641 48.7
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 3.8e-149 532.7 641 49.1
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 1.9e-148 530.4 641 50.9
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 2.1e-147 526.9 639 48.2
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 1.8e-146 523.9 610 49.2
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.2e-144 516.9 641 47.7
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 3.7e-144 516.2 641 47.6
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 4.8e-144 515.8 641 47.7
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 7.0e-143 511.9 615 47.5
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 7.0e-143 511.9 650 47.5
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 4.5e-142 509.2 660 47.0
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 1.7e-141 507.3 674 46.0
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 2.1e-139 500.4 707 44.6
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 8.0e-139 498.4 642 47.2
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 1.8e-138 497.3 643 45.7
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 3.0e-138 496.5 621 47.7
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 5.2e-138 495.7 621 48.1
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 5.2e-138 495.7 639 47.7
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 6.8e-138 495.4 640 46.1
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.5e-137 494.2 624 45.4
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 2.0e-137 493.8 639 47.1
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 9.8e-137 491.5 640 45.8
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 1.7e-136 490.7 639 44.8
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 3.7e-136 489.6 616 46.9
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 4.8e-136 489.2 658 46.2
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 8.3e-136 488.4 674 45.7
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 3.1e-135 486.5 645 46.0
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 4.1e-135 486.1 640 45.5
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 2.2e-133 480.3 650 44.5
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 6.5e-133 478.8 624 46.5
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 5.5e-132 475.7 647 44.8
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 2.1e-131 473.8 649 44.1
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 2.7e-131 473.4 656 44.8
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 2.7e-131 473.4 642 45.3
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 2.7e-131 473.4 612 46.9
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 3.6e-131 473.0 636 44.3
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 4.7e-131 472.6 656 45.0
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.0e-130 469.9 640 46.4
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 3.0e-130 469.9 642 44.2
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 2.0e-129 467.2 648 44.6
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 2.0e-129 467.2 639 44.8
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 3.4e-129 466.5 609 45.3
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 5.7e-129 465.7 613 44.7
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 7.5e-129 465.3 641 45.1
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 1.3e-128 464.5 617 46.0
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 1.3e-128 464.5 639 45.4
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 1.7e-128 464.2 648 44.8
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 2.2e-128 463.8 612 45.8
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 2.8e-128 463.4 627 45.0
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 1.1e-127 461.5 611 45.8
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 5.4e-127 459.1 621 45.4
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 7.0e-127 458.8 646 44.7
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 9.1e-127 458.4 645 43.9
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 9.1e-127 458.4 645 44.8
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.2e-126 458.0 662 44.4
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 3.5e-126 456.4 638 44.0
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.5e-126 456.1 637 43.5
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 5.9e-126 455.7 615 44.6
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 2.9e-125 453.4 638 45.0
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 5.0e-125 452.6 410 58.3
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 8.6e-125 451.8 635 43.1
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.2e-124 449.5 637 43.2
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 5.6e-124 449.1 617 44.9
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 1.2e-123 448.0 670 43.0
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 4.7e-123 446.0 612 46.1
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 1.0e-122 444.9 509 51.1
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 1.8e-122 444.1 454 59.0
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 2.3e-122 443.7 612 44.3
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 1.5e-121 441.0 644 43.2
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 1.3e-120 438.0 640 45.3
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 1.3e-120 438.0 644 45.0
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 1.7e-120 437.6 638 43.1
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 4.9e-120 436.0 646 43.7
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 4.9e-120 436.0 668 41.3
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 6.4e-120 435.6 638 43.3
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.7e-118 430.3 668 41.0
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 3.5e-118 429.9 628 41.1
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 7.8e-118 428.7 618 42.2
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 1.9e-116 424.1 638 42.6
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 8.9e-114 415.2 640 43.8
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 1.2e-113 414.8 640 43.8
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 5.8e-113 412.5 401 55.6
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 7.5e-113 412.1 656 40.2
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 2.5e-108 397.1 569 43.8
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 4.7e-107 392.9 628 42.4
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 4.0e-106 389.8 374 57.5
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 7.5e-105 385.6 610 38.9
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 2.1e-102 377.5 630 38.6
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 2.7e-102 377.1 563 43.3
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 2.8e-91 340.5 360 54.2
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.1e-90 338.6 376 50.0
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 3.4e-89 333.6 324 54.3
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 8.7e-85 318.9 586 37.5
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.8e-82 311.2 250 61.2
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 4.2e-79 300.1 625 35.7
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 7.9e-78 295.8 217 72.4
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 6.4e-72 276.2 390 43.8
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 3.0e-69 267.3 381 43.6
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 5.8e-65 253.1 436 36.2
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 5.7e-60 236.5 510 35.1
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 1.3e-59 235.3 243 50.2
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 1.4e-58 231.9 258 52.7
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 4.1e-58 230.3 238 51.3
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 4.5e-57 226.9 422 39.1
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 5.9e-57 226.5 439 34.9
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 1.4e-55 221.9 421 34.4
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 1.0e-53 215.7 588 29.9
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 1.1e-52 212.2 578 31.5
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 9.7e-52 209.1 206 51.5
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 9.7e-52 209.1 256 49.2
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 4.6e-46 190.3 263 45.6
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.4e-42 178.7 188 52.1
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 4.8e-35 153.7 109 67.9
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 2.4e-34 151.4 255 43.1
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 1.7e-32 145.2 283 37.1
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 6.5e-32 143.3 255 38.8
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 3.2e-31 141.0 95 71.6
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 4.0e-29 134.0 264 37.5
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 1.3e-27 129.0 147 46.9
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 2.2e-27 128.3 256 35.2
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 2.8e-27 127.9 279 35.8
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 3.7e-27 127.5 205 41.0
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 1.3e-19 102.4 178 39.3
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.1e-18 99.4 248 33.5
Nitab4.5_0000123g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 3.5e-17 94.4 102 55.9
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 2.9e-16 91.3 83 54.2
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 5.0e-16 90.5 178 37.1
ATR1154G016 Amborella trichopoda HOM05D003892 ORTHO05D004522 2.0e-12 78.6 107 39.3
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 7.0e-10 70.1 346 24.3
arahy.Tifrunner.gnm1.ann1.RB1WVK Arachis hypogaea HOM05D003892 ORTHO05D004522 1.6e-09 68.9 157 36.3
ATR1154G039 Amborella trichopoda HOM05D003892 ORTHO05D004522 2.9e-08 64.7 150 31.3
Sabra17G0067200 Salix brachista HOM05D003892 ORTHO05D004522 1.6e-06 58.9 91 38.5
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 2.8e-06 58.2 39 66.7


User provided reference genes

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