Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 9.7e-56 219.9 113 100.0
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 3.5e-45 184.9 113 86.7
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 1.3e-44 183.0 113 87.6
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 6.8e-25 117.5 115 59.1
Nitab4.5_0000721g0120 Nicotiana tabacum HOM05D005113 ORTHO05D006045 8.3e-23 110.5 116 56.0
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 1.3e-20 103.2 109 56.0
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 3.3e-19 98.6 109 55.0
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 9.5e-19 97.1 109 54.1
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 8.0e-18 94.0 119 52.9
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 1.8e-17 92.8 120 48.3
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 2.3e-17 92.4 125 48.0
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.5e-16 89.7 112 46.4
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 2.6e-16 89.0 112 51.8
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 7.5e-16 87.4 122 44.3
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 7.5e-16 87.4 110 47.3
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 7.5e-16 87.4 107 48.6
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 1.7e-15 86.3 117 47.9
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 2.9e-15 85.5 108 46.3
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 2.9e-15 85.5 121 45.5
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 4.9e-15 84.7 111 45.0
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 4.9e-15 84.7 115 47.0
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 8.3e-15 84.0 109 42.2
Nitab4.5_0000429g0090 Nicotiana tabacum HOM05D048864 ORTHO05D006045 1.4e-14 83.2 116 51.7
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 2.4e-14 82.4 112 43.8
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 3.2e-14 82.0 117 42.7
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 4.1e-14 81.6 119 45.4
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 7.0e-14 80.9 114 50.0
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 9.2e-14 80.5 103 46.6
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 3.5e-13 78.6 119 42.9
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 2.3e-12 75.9 124 45.2
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 2.3e-12 75.9 122 43.4
Nitab4.5_0010272g0010 Nicotiana tabacum HOM05D048864 ORTHO05D006045 3.0e-12 75.5 118 50.8
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 5.0e-12 74.7 127 44.1
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 8.6e-12 73.9 125 41.6
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 1.5e-11 73.2 112 41.1
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 2.5e-11 72.4 126 39.7
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.3e-11 72.0 134 39.6
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 4.3e-11 71.6 119 42.0
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 4.3e-11 71.6 127 43.3
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 2.1e-10 69.3 120 39.2
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 2.1e-10 69.3 124 41.9
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 2.1e-10 69.3 123 43.9
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 3.6e-10 68.6 110 43.6
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 3.6e-10 68.6 135 37.8
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 3.6e-10 68.6 112 42.0
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 3.6e-10 68.6 117 44.4
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 4.7e-10 68.2 128 39.1
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 6.2e-10 67.8 126 44.4
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.8e-09 66.2 126 42.9
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.8e-09 66.2 126 42.9
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.8e-09 66.2 126 42.9
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.8e-09 66.2 124 41.1
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.8e-09 66.2 125 38.4
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 2.3e-09 65.9 124 37.9
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.3e-09 65.9 117 41.0
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.3e-09 65.9 126 38.1
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 4.0e-09 65.1 127 42.5
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 5.2e-09 64.7 124 41.1
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 5.2e-09 64.7 124 41.1
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 6.8e-09 64.3 136 36.8
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 1.2e-08 63.5 133 37.6
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 1.2e-08 63.5 60 61.7
Glyma.10G086500 Glycine max HOM05D005113 ORTHO05D006045 2.0e-08 62.8 120 38.3
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 2.0e-08 62.8 124 37.1
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 2.0e-08 62.8 136 38.2
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 2.0e-08 62.8 111 38.7
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 3.4e-08 62.0 95 44.2
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 4.4e-08 61.6 127 38.6
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 7.5e-08 60.8 120 36.7
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 7.5e-08 60.8 60 55.0
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 9.9e-08 60.5 115 34.8
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.3e-07 60.1 114 36.8
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 1.7e-07 59.7 116 37.9
Phvul.007G265600 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 1.7e-07 59.7 127 34.6
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.7e-07 59.7 50 66.0
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 2.2e-07 59.3 131 36.6
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 2.9e-07 58.9 108 40.7
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 2.9e-07 58.9 138 36.2
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 3.7e-07 58.5 111 37.8
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 3.7e-07 58.5 109 41.3
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 6.4e-07 57.8 60 60.0
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 6.4e-07 57.8 123 34.1
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 8.3e-07 57.4 57 59.6
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 8.3e-07 57.4 95 41.1
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 8.3e-07 57.4 109 40.4
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 1.1e-06 57.0 84 50.0
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 1.9e-06 56.2 84 48.8
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.9e-06 56.2 71 49.3
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.4e-06 55.8 52 61.5
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 2.4e-06 55.8 126 34.9
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 3.2e-06 55.5 109 37.6
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 3.2e-06 55.5 60 60.0
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 3.2e-06 55.5 59 52.5
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 3.2e-06 55.5 60 51.7
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 3.2e-06 55.5 60 60.0
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 4.1e-06 55.1 59 50.8
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 5.4e-06 54.7 60 60.0
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 7.1e-06 54.3 62 56.5
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 7.1e-06 54.3 60 53.3
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 9.2e-06 53.9 60 55.0
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 9.2e-06 53.9 60 56.7
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 9.2e-06 53.9 60 56.7


User provided reference genes

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