Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021078 Solanum tuberosum HOM05D007732 ORTHO05D010105 2.0e-92 342.4 172 100.0
PGSC0003DMG400004096 Solanum tuberosum HOM05D007732 ORTHO05D010105 8.4e-67 257.3 156 85.9
PGSC0003DMG400017393 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.3e-46 190.3 113 82.3
Sopen11g020290 Solanum pennellii HOM05D007732 ORTHO05D010105 7.1e-34 147.9 127 61.4
Sopen03g017640 Solanum pennellii HOM05D007732 ORTHO05D010105 1.6e-33 146.7 123 61.8
PGSC0003DMG400002289 Solanum tuberosum HOM05D007732 ORTHO05D010105 2.1e-33 146.4 111 69.4
PGSC0003DMG400024411 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.8e-32 143.3 114 67.5
Sopen09g013580 Solanum pennellii HOM05D007732 ORTHO05D010105 3.3e-31 139.0 111 64.0
PGSC0003DMG400035070 Solanum tuberosum HOM05D007732 ORTHO05D010105 3.3e-31 139.0 107 67.3
Sopen12g020050 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-29 133.3 117 61.5
Sopen04g012070 Solanum pennellii HOM05D007732 ORTHO05D010105 1.5e-28 130.2 118 59.3
Sopen05g010040 Solanum pennellii HOM05D007732 ORTHO05D010105 7.6e-28 127.9 106 65.1
CAN.G731.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-24 115.2 123 47.2
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-23 114.0 95 57.9
PGSC0003DMG400002216 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.1e-23 114.0 116 54.3
CAN.G101.24 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-23 113.6 119 48.7
CAN.G311.37 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-23 113.6 119 49.6
Sopen09g014630 Solanum pennellii HOM05D007732 ORTHO05D010105 2.5e-23 112.8 85 65.9
CAN.G1079.1 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-23 111.3 97 56.7
CAN.G1181.29 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-22 109.8 97 54.6
CAN.G786.22 Capsicum annuum HOM05D000541 ORTHO05D000137 8.2e-22 107.8 97 54.6
CAN.G320.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-21 107.5 122 49.2
CAN.G407.73 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-21 105.9 126 46.0
CAN.G1175.14 Capsicum annuum HOM05D000541 ORTHO05D000137 4.1e-21 105.5 138 43.5
CAN.G498.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-20 104.0 114 47.4
CAN.G1103.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-20 103.6 102 50.0
CAN.G279.30 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-20 103.6 96 54.2
CAN.G27.51 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-20 102.4 112 44.6
CAN.G176.17 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-20 101.7 98 51.0
Sopen10g015070 Solanum pennellii HOM05D007732 ORTHO05D010105 5.9e-20 101.7 64 79.7
CAN.G321.7 Capsicum annuum HOM05D000541 ORTHO05D000137 7.7e-20 101.3 97 52.6
CAN.G18.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-19 100.9 98 51.0
CAN.G1491.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-19 100.5 82 54.9
CAN.G587.42 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-19 100.1 102 48.0
Sopen05g014530 Solanum pennellii HOM05D007732 ORTHO05D010105 2.9e-19 99.4 90 62.2
Sopen08g011660 Solanum pennellii HOM05D007732 ORTHO05D010105 5.0e-19 98.6 64 76.6
PGSC0003DMG400024386 Solanum tuberosum HOM05D007732 ORTHO05D010105 6.5e-19 98.2 53 90.6
CAN.G312.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-18 97.4 118 44.1
Sopen03g017540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-18 97.4 84 58.3
CAN.G1422.9 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-18 97.1 82 53.7
Sopen10g014500 Solanum pennellii HOM05D000541 ORTHO05D010105 3.2e-18 95.9 73 68.5
PGSC0003DMG400003472 Solanum tuberosum HOM05D007732 ORTHO05D010105 3.2e-18 95.9 54 88.9
CAN.G803.33 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-18 95.5 97 50.5
Sopen02g003930 Solanum pennellii HOM05D007732 ORTHO05D010105 5.5e-18 95.1 66 72.7
PGSC0003DMG400016047 Solanum tuberosum HOM05D007732 ORTHO05D010105 5.5e-18 95.1 72 68.1
CAN.G152.14 Capsicum annuum HOM05D000541 ORTHO05D000137 7.2e-18 94.7 109 46.8
Sopen08g013000 Solanum pennellii HOM05D007732 ORTHO05D010105 7.2e-18 94.7 88 59.1
CAN.G168.30 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-17 94.0 122 39.3
CAN.G744.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-17 93.2 97 50.5
CAN.G267.7 Capsicum annuum HOM05D000541 ORTHO05D000137 4.7e-17 92.0 93 48.4
Sopen07g011910 Solanum pennellii HOM05D007732 ORTHO05D010105 2.3e-16 89.7 71 67.6
Sopen09g012970 Solanum pennellii HOM05D007732 ORTHO05D010105 2.3e-16 89.7 71 69.0
PGSC0003DMG400006519 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.5e-15 87.0 53 83.0
CAN.G1597.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-15 85.9 78 51.3
Sopen11g025370 Solanum pennellii HOM05D000541 ORTHO05D000137 9.7e-15 84.3 95 48.4
CAN.G673.9 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-14 82.0 90 42.2
CAN.G567.26 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-13 79.7 85 48.2
CAN.G283.8 Capsicum annuum HOM05D000541 ORTHO05D000137 5.3e-13 78.6 71 52.1
Sopen06g016730 Solanum pennellii HOM05D007732 ORTHO05D010105 6.9e-13 78.2 54 77.8
Sopen03g027050 Solanum pennellii HOM05D007732 ORTHO05D010105 3.4e-12 75.9 61 62.3
PGSC0003DMG400026521 Solanum tuberosum HOM05D013289 ORTHO05D017128 7.7e-12 74.7 99 34.3
CAN.G674.23 Capsicum annuum HOM05D000022 ORTHO05D115238 1.0e-11 74.3 118 39.8
PGSC0003DMG400014996 Solanum tuberosum HOM05D013289 ORTHO05D017128 1.0e-11 74.3 102 32.4
Sopen07g008740 Solanum pennellii HOM05D007732 ORTHO05D010105 2.2e-11 73.2 59 66.1
Sopen06g013640 Solanum pennellii HOM05D007732 ORTHO05D010105 5.0e-11 72.0 54 72.2
PGSC0003DMG400002243 Solanum tuberosum HOM05D012110 ORTHO05D014566 1.4e-10 70.5 48 62.5
CAN.G1097.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-10 69.7 91 44.0
Sopen01g018600 Solanum pennellii HOM05D007732 ORTHO05D010105 3.2e-10 69.3 50 72.0
Sopen10g020300 Solanum pennellii HOM05D007732 ORTHO05D010105 4.2e-10 68.9 50 74.0
Sopen01g022190 Solanum pennellii HOM05D007732 ORTHO05D010105 7.2e-10 68.2 49 75.5
Sopen07g007480 Solanum pennellii HOM05D007732 ORTHO05D010105 1.6e-09 67.0 75 49.3
CAN.G363.16 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-09 65.9 80 50.0
CAN.G445.4 Capsicum annuum HOM05D000356 ORTHO05D000137 6.1e-09 65.1 68 47.1
CAN.G490.36 Capsicum annuum HOM05D000541 ORTHO05D000137 8.0e-09 64.7 67 52.2
CAN.G608.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-08 64.3 71 52.1
CAN.G687.22 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-08 64.3 73 47.9
Sopen05g019150 Solanum pennellii HOM05D007732 ORTHO05D010105 1.0e-08 64.3 57 63.2
CAN.G1819.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-08 63.9 81 48.1
CAN.G261.7 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-08 63.5 75 48.0
Sopen04g013220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 63.5 56 64.3
PGSC0003DMG400035177 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.8e-08 63.5 50 64.0
CAN.G165.26 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-08 62.8 67 46.3
Sopen04g015190 Solanum pennellii HOM05D007732 ORTHO05D010105 3.0e-08 62.8 61 62.3
CAN.G137.62 Capsicum annuum HOM05D000541 ORTHO05D000137 3.9e-08 62.4 67 49.3
CAN.G1218.22 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-08 62.0 56 51.8
CAN.G1358.1 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-08 62.0 62 50.0
CAN.G645.28 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-08 62.0 55 52.7
Sopen12g009790 Solanum pennellii HOM05D008562 ORTHO05D009932 5.2e-08 62.0 53 54.7
Sopen07g008420 Solanum pennellii HOM05D007732 ORTHO05D010105 6.7e-08 61.6 45 68.9
CAN.G1131.5 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-07 60.8 90 38.9
CAN.G959.21 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-07 60.8 56 48.2
Sopen09g022580 Solanum pennellii HOM05D007732 ORTHO05D010105 1.1e-07 60.8 49 69.4
CAN.G1026.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-07 60.5 50 58.0
Sopen08g008870 Solanum pennellii HOM05D007732 ORTHO05D010105 1.5e-07 60.5 50 66.0
CAN.G1634.5 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-07 60.1 65 43.1
CAN.G801.10 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-07 60.1 51 52.9
CAN.G935.2 Capsicum annuum HOM05D000541 ORTHO05D002961 2.0e-07 60.1 75 49.3
CAN.G1546.3 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-07 59.7 52 53.8
CAN.G157.1 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-07 59.7 51 52.9
CAN.G940.14 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-07 59.7 69 47.8
CAN.G1002.5 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.3 114 34.2
CAN.G1328.10 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.3 50 56.0
CAN.G1334.14 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.3 50 54.0
CAN.G137.41 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.3 50 52.0
CAN.G262.17 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-07 58.9 90 37.8
CAN.G628.67 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-07 58.9 60 45.0
CAN.G1006.6 Capsicum annuum HOM05D000541 ORTHO05D000137 5.7e-07 58.5 48 58.3
Sopen12g016300 Solanum pennellii HOM05D007732 ORTHO05D010105 5.7e-07 58.5 51 54.9
Sopen05g017310 Solanum pennellii HOM05D007732 ORTHO05D010105 7.4e-07 58.2 118 34.7
Sopen04g024420 Solanum pennellii HOM05D007732 ORTHO05D010105 9.7e-07 57.8 48 66.7
CAN.G134.37 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.4 51 51.0
CAN.G1389.31 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.4 49 51.0
CAN.G184.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.4 98 34.7
CAN.G57.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.4 63 46.0
CAN.G426.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-06 57.0 67 46.3
CAN.G516.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-06 57.0 48 56.2
CAN.G536.8 Capsicum annuum HOM05D003627 ORTHO05D001832 1.7e-06 57.0 47 55.3
CAN.G771.75 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-06 57.0 50 52.0
CAN.G1181.32 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-06 56.6 50 52.0
CAN.G62.58 Capsicum annuum HOM05D000541 ORTHO05D000137 2.2e-06 56.6 72 41.7
CAN.G1236.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.2 48 56.2
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.2 71 45.1
CAN.G184.46 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-06 55.8 50 52.0
CAN.G59.10 Capsicum annuum HOM05D000541 ORTHO05D000137 3.7e-06 55.8 51 49.0
CAN.G266.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.5 51 49.0
CAN.G405.8 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.5 51 49.0
CAN.G616.29 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.5 50 52.0
CAN.G358.143 Capsicum annuum HOM05D000541 ORTHO05D000137 8.2e-06 54.7 46 52.2


User provided reference genes

Program Settings