Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400021037 Solanum tuberosum HOM05D008559 ORTHO05D026183 6.8e-102 374.0 192 100.0
PGSC0003DMG400041497 Solanum tuberosum HOM05D008559 ORTHO05D026183 9.0e-78 293.9 189 82.0
PGSC0003DMG400042155 Solanum tuberosum HOM05D008559 ORTHO05D026183 5.3e-62 241.5 184 72.3
Solyc11g039800.2 Solanum lycopersicum HOM05D008559 ORTHO05D026183 2.7e-42 176.0 125 76.8
PGSC0003DMG400026116 Solanum tuberosum HOM05D008559 ORTHO05D026183 2.7e-34 149.4 147 59.9
PGSC0003DMG400047039 Solanum tuberosum HOM05D009158 ORTHO05D016389 1.8e-30 136.7 154 55.2
PGSC0003DMG400037430 Solanum tuberosum HOM05D009158 ORTHO05D010882 1.0e-28 131.0 173 49.1
PGSC0003DMG400047252 Solanum tuberosum HOM05D012752 ORTHO05D395053 1.4e-22 110.5 195 40.0
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 4.5e-21 105.5 115 52.2
PGSC0003DMG400043078 Solanum tuberosum HOM05D009158 ORTHO05D010882 2.8e-15 86.3 110 47.3
PGSC0003DMG400004297 Solanum tuberosum HOM05D000074 ORTHO05D001293 5.4e-14 82.0 83 56.6
Nitab4.5_0006309g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.0e-14 81.6 118 36.4
Nitab4.5_0002031g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.2e-14 81.3 152 30.9
PGSC0003DMG400034435 Solanum tuberosum HOM05D012752 ORTHO05D394973 3.5e-13 79.3 193 32.6
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.5e-13 79.0 88 43.2
Nitab4.5_0001016g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.8e-13 78.2 137 31.4
PGSC0003DMG400003791 Solanum tuberosum HOM05D009158 ORTHO05D016389 7.8e-13 78.2 150 39.3
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.0e-12 77.8 118 35.6
Nitab4.5_0000773g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.7e-12 77.0 107 38.3
PGSC0003DMG400044270 Solanum tuberosum HOM05D012752 ORTHO05D010882 5.0e-12 75.5 140 40.7
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.5e-11 73.9 82 43.9
PGSC0003DMG400040555 Solanum tuberosum HOM05D012752 ORTHO05D010882 1.5e-11 73.9 140 40.0
PGSC0003DMG400044597 Solanum tuberosum HOM05D012752 ORTHO05D010882 1.5e-11 73.9 139 41.0
CAN.G153.5 Capsicum annuum HOM05D012752 ORTHO05D115846 1.9e-11 73.6 137 35.0
Nitab4.5_0004380g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.3e-11 72.4 140 28.6
Nitab4.5_0000315g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.6e-11 72.0 100 40.0
Nitab4.5_0002173g0030 Nicotiana tabacum HOM05D014863 ORTHO05D011161 5.6e-11 72.0 122 39.3
Nitab4.5_0000290g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.6e-10 70.5 98 38.8
Nitab4.5_0004542g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.6e-10 69.3 82 39.0
Nitab4.5_0000311g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.1e-09 66.2 103 35.9
Nitab4.5_0000163g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.0e-09 65.9 77 44.2
Nitab4.5_0000206g0150 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.8e-09 65.1 64 45.3
Nitab4.5_0000337g0190 Nicotiana tabacum HOM05D014863 ORTHO05D011161 8.9e-09 64.7 90 40.0
Nitab4.5_0004318g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 8.9e-09 64.7 146 29.5
PGSC0003DMG400013190 Solanum tuberosum HOM05D009158 ORTHO05D010882 1.2e-08 64.3 113 38.1
PGSC0003DMG400030050 Solanum tuberosum HOM05D009158 ORTHO05D010882 1.2e-08 64.3 97 43.3
PGSC0003DMG400025615 Solanum tuberosum HOM05D009158 ORTHO05D010882 2.0e-08 63.5 62 58.1
CAN.G1492.14 Capsicum annuum HOM05D009158 ORTHO05D010882 2.6e-08 63.2 55 56.4
Nitab4.5_0000700g0040 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.6e-08 63.2 71 40.8
PGSC0003DMG400007667 Solanum tuberosum HOM05D009158 ORTHO05D010882 4.4e-08 62.4 76 50.0
Nitab4.5_0000493g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.8e-08 62.0 87 34.5
Nitab4.5_0004792g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.5e-08 61.6 79 38.0
PGSC0003DMG400035859 Solanum tuberosum HOM05D009158 ORTHO05D010882 7.5e-08 61.6 100 42.0
PGSC0003DMG400046783 Solanum tuberosum HOM05D009158 ORTHO05D010882 1.3e-07 60.8 100 42.0
PGSC0003DMG400045264 Solanum tuberosum HOM05D011774 ORTHO05D010882 1.7e-07 60.5 94 39.4
Nitab4.5_0000338g0200 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.7e-07 59.3 75 38.7
PGSC0003DMG400037301 Solanum tuberosum HOM05D009158 ORTHO05D010882 4.9e-07 58.9 162 34.0
PGSC0003DMG400013601 Solanum tuberosum HOM05D009158 ORTHO05D010882 6.4e-07 58.5 96 41.7
PGSC0003DMG400037113 Solanum tuberosum HOM05D009158 ORTHO05D010882 6.4e-07 58.5 99 41.4
PGSC0003DMG400041909 Solanum tuberosum HOM05D009158 ORTHO05D010882 1.1e-06 57.8 95 40.0
Nitab4.5_0000006g0060 Nicotiana tabacum HOM05D008559 ORTHO05D283084 3.2e-06 56.2 105 36.2
Nitab4.5_0004043g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.2e-06 56.2 59 47.5
Sopen03g020220 Solanum pennellii HOM05D009158 ORTHO05D010882 5.4e-06 55.5 109 35.8
PGSC0003DMG400025883 Solanum tuberosum HOM05D009158 ORTHO05D010882 5.4e-06 55.5 95 41.1


User provided reference genes

Program Settings