Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 2.7e-109 398.7 200 100.0
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 4.2e-102 374.8 200 93.0
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 6.3e-90 334.3 196 86.2
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 6.9e-73 277.7 196 76.5
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 1.8e-68 263.1 203 68.5
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 5.7e-67 258.1 203 67.5
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 4.1e-65 251.9 204 64.2
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 3.8e-63 245.4 201 64.7
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 1.5e-62 243.4 206 64.1
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.6e-61 240.0 204 63.7
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 6.1e-61 238.0 215 60.9
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 8.0e-61 237.7 204 60.8
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 2.3e-60 236.1 206 61.7
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 4.0e-60 235.3 185 68.1
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 6.7e-60 234.6 202 62.9
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 8.8e-60 234.2 206 61.7
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 1.2e-59 233.8 191 63.9
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 2.0e-59 233.0 212 59.9
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 5.7e-59 231.5 201 63.7
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 1.3e-58 230.3 220 56.8
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 2.8e-58 229.2 206 59.2
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.8e-58 229.2 121 96.7
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 6.3e-58 228.0 210 59.0
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 8.2e-58 227.6 196 61.2
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 1.4e-57 226.9 202 59.9
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 3.1e-57 225.7 197 60.4
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 7.0e-57 224.6 206 60.2
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 9.1e-57 224.2 185 62.2
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 1.2e-56 223.8 200 60.5
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 1.3e-55 220.3 198 60.1
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 1.7e-55 219.9 202 59.4
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 2.2e-55 219.5 196 58.7
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 2.2e-55 219.5 193 62.2
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 2.9e-55 219.2 194 61.3
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 2.9e-55 219.2 191 61.3
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 3.8e-55 218.8 206 61.2
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 5.0e-55 218.4 199 62.3
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 1.5e-54 216.9 200 57.5
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 1.9e-54 216.5 196 60.2
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 3.2e-54 215.7 178 64.6
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 3.2e-54 215.7 189 59.3
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 3.2e-54 215.7 193 60.1
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 4.2e-54 215.3 181 63.5
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 7.2e-54 214.5 183 61.2
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 7.2e-54 214.5 181 63.0
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 7.2e-54 214.5 201 57.2
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 7.2e-54 214.5 218 52.8
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 1.2e-53 213.8 206 57.8
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 1.6e-53 213.4 201 56.7
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 1.6e-53 213.4 169 65.1
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 1.6e-53 213.4 196 57.7
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 2.7e-53 212.6 181 62.4
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 4.7e-53 211.8 182 61.0
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 8.0e-53 211.1 207 57.5
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 8.0e-53 211.1 189 59.8
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 1.0e-52 210.7 181 62.4
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 1.8e-52 209.9 207 57.0
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 1.8e-52 209.9 201 60.2
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 2.3e-52 209.5 190 60.5
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 2.3e-52 209.5 185 61.1
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 2.3e-52 209.5 160 66.2
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 3.0e-52 209.1 190 57.9
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 6.8e-52 208.0 207 55.6
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 8.8e-52 207.6 189 60.8
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 1.2e-51 207.2 182 59.9
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 1.2e-51 207.2 182 59.9
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 2.0e-51 206.5 196 58.2
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 2.0e-51 206.5 196 58.2
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 2.6e-51 206.1 193 56.0
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 2.2e-50 203.0 199 55.3
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 2.2e-50 203.0 205 56.1
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 8.3e-50 201.1 151 66.9
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 1.4e-49 200.3 195 55.9
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 4.1e-49 198.7 195 56.4
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 4.1e-49 198.7 195 56.4
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 7.0e-49 198.0 195 55.9
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 2.9e-47 192.6 136 70.6
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 4.2e-46 188.7 140 64.3
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 5.5e-46 188.3 229 47.2
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 1.6e-45 186.8 165 57.0
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 4.7e-45 185.3 192 55.7
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 2.3e-44 183.0 168 58.9
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 4.0e-44 182.2 160 59.4
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 7.5e-43 177.9 140 63.6
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 6.3e-42 174.9 228 48.7
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 1.1e-41 174.1 130 66.9
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 2.4e-41 172.9 232 47.0
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 4.1e-41 172.2 116 63.8
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 1.3e-39 167.2 137 59.9
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 6.6e-39 164.9 142 61.3
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 1.5e-38 163.7 160 55.6
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 1.9e-38 163.3 130 58.5
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 2.1e-37 159.8 143 54.5
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 3.6e-37 159.1 282 38.3
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 6.1e-37 158.3 141 55.3
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.4e-36 157.1 138 58.7
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 2.2e-34 149.8 124 62.9
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 6.0e-32 141.7 99 74.7
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 2.5e-30 136.3 279 35.5
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 2.3e-28 129.8 120 54.2
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 5.4e-25 118.6 117 58.1
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 1.6e-21 107.1 164 42.1
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 6.2e-21 105.1 101 53.5
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 3.4e-19 99.4 80 67.5
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 7.5e-19 98.2 106 43.4
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 4.9e-18 95.5 209 34.9
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.1e-17 94.4 69 66.7
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 3.9e-15 85.9 84 56.0
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 8.9e-12 74.7 115 40.0
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 1.2e-11 74.3 59 59.3
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 3.2e-09 66.2 37 70.3
CANSAT35G0509 Cannabis sativa HOM05D002397 ORTHO05D002667 4.1e-09 65.9 134 32.8
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 4.1e-09 65.9 139 30.9
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 5.4e-09 65.5 139 30.9
Carub.0001s2956 Capsella rubella HOM05D002397 ORTHO05D002667 2.7e-08 63.2 135 31.9
Sp1g26980 Schrenkiella parvula HOM05D002397 ORTHO05D002667 1.3e-07 60.8 127 31.5
CBR_g50359 Chara braunii HOM05D002397 ORTHO05D002667 3.0e-07 59.7 105 34.3
COL.COLO4_17651 Corchorus olitorius HOM05D002397 ORTHO05D002667 3.0e-07 59.7 101 35.6
MD05G1250300 Malus domestica HOM05D002397 ORTHO05D002667 3.0e-07 59.7 140 32.9
Thecc.02G008600 Theobroma cacao HOM05D002397 ORTHO05D002667 3.9e-07 59.3 101 34.7
AL1G49390 Arabidopsis lyrata HOM05D002397 ORTHO05D002667 5.1e-07 58.9 135 30.4
BcaB03g13805 Brassica carinata HOM05D002397 ORTHO05D002667 5.1e-07 58.9 101 34.7
HanXRQChr14g0447211 Helianthus annuus HOM05D002397 ORTHO05D002667 5.1e-07 58.9 127 30.7
Nn7g38244 Nelumbo nucifera HOM05D002397 ORTHO05D002667 5.1e-07 58.9 101 33.7
C07p14570 Brassica napus HOM05D002397 ORTHO05D002667 6.6e-07 58.5 101 33.7
BolC7t41956H Brassica oleracea HOM05D002397 ORTHO05D002667 6.6e-07 58.5 101 33.7
Duzib052G0791 Durio zibethinus HOM05D002397 ORTHO05D002667 6.6e-07 58.5 101 34.7
Thhalv10009998m.g Eutrema salsugineum HOM05D002397 ORTHO05D002667 6.6e-07 58.5 101 34.7
Nitab4.5_0001288g0140 Nicotiana tabacum HOM05D002397 ORTHO05D002667 8.7e-07 58.2 114 34.2
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 8.7e-07 58.2 109 33.0
A07p09470 Brassica napus HOM05D002397 ORTHO05D002667 1.5e-06 57.4 139 30.9
BraA07t28743Z Brassica rapa HOM05D002397 ORTHO05D002667 1.5e-06 57.4 139 30.9
Phvul.009G240300 Phaseolus vulgaris HOM05D002397 ORTHO05D002667 1.9e-06 57.0 128 29.7
THA.LOC104812704 Tarenaya hassleriana HOM05D002397 ORTHO05D002667 2.5e-06 56.6 101 32.7
ECA238G1645 Erigeron canadensis HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 33.7
Prupe.4G113300 Prunus persica HOM05D002397 ORTHO05D002667 3.3e-06 56.2 133 31.6
PGR142G3425 Punica granatum HOM05D002397 ORTHO05D002667 3.3e-06 56.2 144 30.6
SEGI_32624 Sequoiadendron giganteum HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 31.7
HPP92_004188 Vanilla planifolia HOM05D002397 ORTHO05D002667 3.3e-06 56.2 110 31.8
AagrBONN_evm.TU.Sc2ySwM_228.4317 Anthoceros agrestis HOM05D002397 ORTHO05D002667 4.3e-06 55.8 104 32.7
CSS0046926 Camellia sinensis var. sinensis HOM05D002397 ORTHO05D002667 4.3e-06 55.8 101 33.7
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 4.3e-06 55.8 101 33.7
Glyma.19G123100 Glycine max HOM05D002397 ORTHO05D002667 4.3e-06 55.8 102 34.3
Gohir.A12G046800 Gossypium hirsutum HOM05D002397 ORTHO05D002667 4.3e-06 55.8 109 33.0
Gohir.D12G045800 Gossypium hirsutum HOM05D002397 ORTHO05D002667 4.3e-06 55.8 109 33.0
Gorai.008G048400 Gossypium raimondii HOM05D002397 ORTHO05D002667 4.3e-06 55.8 109 33.0
Lj2A349T11 Lonicera japonica HOM05D002397 ORTHO05D002667 4.3e-06 55.8 101 33.7
PGR004G1811 Punica granatum HOM05D002397 ORTHO05D002667 4.3e-06 55.8 143 28.0
Duzib132G0505 Durio zibethinus HOM05D002397 ORTHO05D002667 7.3e-06 55.1 97 35.1
Potri.015G124700 Populus trichocarpa HOM05D002397 ORTHO05D002667 7.3e-06 55.1 101 32.7
Solyc02g068700.3 Solanum lycopersicum HOM05D002397 ORTHO05D002667 7.3e-06 55.1 101 32.7
Sopen02g017870 Solanum pennellii HOM05D002397 ORTHO05D002667 7.3e-06 55.1 101 32.7
CAN.G149.10 Capsicum annuum HOM05D002397 ORTHO05D002667 9.6e-06 54.7 101 33.7
Cc09_g05990 Coffea canephora HOM05D002397 ORTHO05D002667 9.6e-06 54.7 101 32.7


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