Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020554 Solanum tuberosum HOM05D011051 ORTHO05D003288 4.2e-43 177.6 85 100.0
Solyc06g007260.1 Solanum lycopersicum HOM05D011051 ORTHO05D003288 1.1e-22 109.8 58 86.2
CAN.G389.6 Capsicum annuum HOM05D011051 ORTHO05D003288 3.4e-21 104.8 69 72.5
Solyc06g007270.1 Solanum lycopersicum HOM05D011051 ORTHO05D003288 4.5e-21 104.4 72 68.1
CAN.G181.53 Capsicum annuum HOM05D011051 ORTHO05D003288 5.5e-19 97.4 67 67.2
Nitab4.5_0003952g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.1e-18 95.5 52 86.5
Nitab4.5_0002468g0030 Nicotiana tabacum HOM05D011051 ORTHO05D003288 7.4e-16 87.0 71 57.7
Nitab4.5_0003952g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.4e-14 82.8 49 81.6
Peaxi162Scf00342g00098 Petunia axillaris HOM05D011051 ORTHO05D003288 1.8e-14 82.4 71 52.1
Sopen06g002610 Solanum pennellii HOM05D000162 ORTHO05D000090 1.2e-13 79.7 50 74.0
Sopen06g004630 Solanum pennellii HOM05D011051 ORTHO05D003288 1.2e-13 79.7 71 53.5
CAN.G741.40 Capsicum annuum HOM05D000162 ORTHO05D000090 2.0e-13 79.0 51 72.5
Nitab4.5_0003318g0150 Nicotiana tabacum HOM05D011051 ORTHO05D003288 2.6e-13 78.6 58 56.9
Peaxi162Scf00129g01671 Petunia axillaris HOM05D011051 ORTHO05D003288 7.7e-13 77.0 48 72.9
CAN.G1443.12 Capsicum annuum HOM05D000162 ORTHO05D000090 3.8e-12 74.7 50 70.0
CAN.G1768.10 Capsicum annuum HOM05D000162 ORTHO05D000090 3.8e-12 74.7 50 70.0
Peaxi162Scf00273g01010 Petunia axillaris HOM05D001400 ORTHO05D003288 5.0e-12 74.3 70 47.1
PGSC0003DMG400003401 Solanum tuberosum HOM05D000162 ORTHO05D000090 8.5e-12 73.6 51 62.7
Nitab4.5_0000428g0460 Nicotiana tabacum HOM05D011051 ORTHO05D003288 2.5e-11 72.0 51 64.7
Nitab4.5_0000956g0130 Nicotiana tabacum HOM05D011051 ORTHO05D003288 3.2e-11 71.6 51 58.8
PGSC0003DMG400009687 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.2e-11 71.6 49 71.4
CAN.G741.27 Capsicum annuum HOM05D000162 ORTHO05D000090 4.6e-10 67.8 40 77.5
Nitab4.5_0000428g0500 Nicotiana tabacum HOM05D011051 ORTHO05D014160 4.6e-10 67.8 78 44.9
PGSC0003DMG400009682 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.3e-09 65.5 46 67.4
Sopen06g001200 Solanum pennellii HOM05D000162 ORTHO05D003288 3.9e-09 64.7 45 66.7
Nitab4.5_0013850g0020 Nicotiana tabacum HOM05D011051 ORTHO05D003288 5.1e-09 64.3 58 55.2
Nitab4.5_0000295g0190 Nicotiana tabacum HOM05D000162 ORTHO05D000090 6.7e-09 63.9 35 82.9
Nitab4.5_0003952g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.5e-08 62.0 35 85.7
PGSC0003DMG400003400 Solanum tuberosum HOM05D011051 ORTHO05D003288 7.4e-08 60.5 44 59.1
SalBow3G1670 Salvia bowleyana HOM05D022251 ORTHO05D003288 9.7e-08 60.1 64 43.8
PGSC0003DMG400020643 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-07 59.7 31 87.1
PGSC0003DMG400020644 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-07 59.7 31 87.1
FAN18G0982 Fragaria x ananassa HOM05D009709 ORTHO05D003288 2.8e-07 58.5 55 43.6
PGSC0003DMG400003403 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.4e-06 56.2 44 56.8
CSS0026088 Camellia sinensis var. sinensis HOM05D009709 ORTHO05D003288 2.4e-06 55.5 55 43.6
Nitab4.5_0002641g0030 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.4e-06 55.5 33 78.8
Nitab4.5_0002641g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.4e-06 55.5 33 78.8
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 4.1e-06 54.7 73 34.2
Gorai.009G377200 Gossypium raimondii HOM05D012722 ORTHO05D029832 6.9e-06 53.9 63 42.9
FAN21G0792 Fragaria x ananassa HOM05D000027 ORTHO05D001163 9.1e-06 53.5 81 30.9
FAN21G0960 Fragaria x ananassa HOM05D000027 ORTHO05D001163 9.1e-06 53.5 81 30.9
Gorai.009G378000 Gossypium raimondii HOM05D009709 ORTHO05D003288 9.1e-06 53.5 63 42.9


User provided reference genes

Program Settings