Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 8.2e-91 337.0 169 100.0
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.6e-86 322.8 167 97.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 3.5e-86 321.6 167 97.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.0e-68 262.7 171 83.0
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.5e-65 253.1 187 75.9
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 5.5e-63 244.6 171 78.9
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 9.7e-52 207.2 171 66.7
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 1.4e-50 203.4 172 65.1
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.5e-48 194.5 169 65.7
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.5e-47 192.6 178 60.1
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 3.2e-47 192.2 169 65.7
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.2e-46 190.3 178 64.0
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.2e-44 183.7 170 60.0
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.6e-44 182.6 178 58.4
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.2e-41 173.7 187 55.1
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 9.5e-39 164.1 180 58.3
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.8e-38 162.5 180 57.2
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 3.6e-38 162.2 175 55.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 6.8e-37 157.9 179 55.9
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.2e-36 157.1 183 55.7
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 2.6e-36 156.0 177 57.1
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 5.7e-36 154.8 95 86.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 7.5e-36 154.5 174 54.0
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 7.5e-36 154.5 175 52.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 9.8e-36 154.1 173 54.9
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.7e-35 153.3 184 53.3
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 6.3e-35 151.4 170 55.9
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 6.3e-35 151.4 170 55.9
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 6.3e-35 151.4 179 56.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 8.3e-35 151.0 170 54.7
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 8.3e-35 151.0 170 54.7
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.8e-34 149.8 174 53.4
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 4.1e-34 148.7 170 54.7
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 4.1e-34 148.7 175 52.6
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.0e-34 147.9 177 53.7
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.0e-34 147.9 177 53.7
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 9.2e-34 147.5 175 53.1
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.2e-33 147.1 174 54.0
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.7e-33 146.0 170 54.1
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.7e-33 146.0 170 54.1
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 2.7e-33 146.0 166 55.4
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 4.5e-33 145.2 174 54.6
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 4.5e-33 145.2 170 54.7
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 5.9e-33 144.8 170 52.9
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 7.8e-33 144.4 176 52.3
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.0e-32 144.1 211 46.0
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.3e-32 143.7 176 50.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 2.3e-32 142.9 173 52.0
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.9e-32 142.5 175 49.7
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.1e-31 140.6 176 51.7
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.5e-31 140.2 172 52.9
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.5e-31 140.2 178 50.6
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 3.3e-31 139.0 180 51.1
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.3e-31 139.0 144 55.6
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 4.3e-31 138.7 176 51.7
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 5.6e-31 138.3 180 49.4
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.2e-30 137.1 177 50.8
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.2e-30 137.1 178 48.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.2e-30 137.1 176 52.3
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.1e-30 136.3 165 52.7
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 6.1e-30 134.8 178 49.4
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 6.1e-30 134.8 173 52.6
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 8.0e-30 134.4 179 50.8
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 8.0e-30 134.4 175 50.3
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 1.5e-28 130.2 169 49.7
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 1.5e-28 130.2 169 49.7
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 2.6e-28 129.4 177 50.8
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.6e-28 129.4 182 51.1
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 5.8e-28 128.3 97 69.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 9.8e-28 127.5 162 52.5
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.2e-26 122.5 177 48.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 4.1e-26 122.1 184 45.1
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 7.0e-26 121.3 173 46.8
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 7.0e-26 121.3 180 47.8
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.6e-25 120.2 178 47.2
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.0e-24 117.5 176 46.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.7e-24 116.7 251 36.3
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 5.0e-24 115.2 178 43.8
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 6.6e-24 114.8 94 69.1
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 1.1e-23 114.0 184 46.7
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-23 113.2 178 44.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.9e-23 113.2 94 67.0
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 4.3e-23 112.1 178 46.6
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-22 109.8 178 44.4
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 4.7e-22 108.6 178 43.3
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.7e-22 108.6 178 43.3
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 6.2e-22 108.2 146 52.1
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.2e-22 108.2 179 43.6
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.2e-22 108.2 178 43.3
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 6.2e-22 108.2 179 44.1
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 6.2e-22 108.2 64 82.8
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 3.1e-21 105.9 188 44.1
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 6.8e-21 104.8 150 46.7
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 6.8e-21 104.8 121 49.6
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 8.9e-21 104.4 176 44.9
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 7.5e-20 101.3 147 45.6
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.2e-19 99.8 153 44.4
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.1e-18 97.4 184 40.8
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 3.2e-18 95.9 66 72.7
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.6e-17 93.6 55 85.5
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.6e-17 93.6 173 42.2
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.1e-17 93.2 65 70.8
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.0e-16 90.9 154 44.8
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.9e-16 89.0 177 40.1
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.2e-14 84.0 67 62.7
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.8e-14 82.8 67 61.2
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 3.6e-14 82.4 150 40.0
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 6.2e-14 81.6 150 40.0
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 5.8e-12 75.1 137 39.4
SGA_v2.0_scaffold111G31380 Striga asiatica HOM05D006875 ORTHO05D008416 5.8e-12 75.1 143 39.2
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 2.9e-11 72.8 76 52.6
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 6.4e-11 71.6 137 40.1
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 1.4e-10 70.5 114 46.5
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 2.4e-10 69.7 67 56.7
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.4e-10 69.7 45 71.1
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 3.0e-08 62.8 70 52.9


User provided reference genes

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