Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400020234 Solanum tuberosum HOM05D007742 ORTHO05D004072 4.2e-119 431.4 221 100.0
Peaxi162Scf00420g00831 Petunia axillaris HOM05D007742 ORTHO05D004072 3.4e-52 209.1 217 57.1
Hma1.2p1_0868F.1_g230420 Hydrangea macrophylla HOM05D007742 ORTHO05D004072 3.9e-24 115.9 168 40.5
Cc07_g01400 Coffea canephora HOM05D007742 ORTHO05D004072 1.5e-23 114.0 174 37.9
Migut.A00628 Erythranthe guttata HOM05D007742 ORTHO05D004072 4.3e-23 112.5 166 40.4
Dinv33270 Davidia involucrata HOM05D007742 ORTHO05D004072 2.8e-22 109.8 167 40.1
Prupe.3G314400 Prunus persica HOM05D007742 ORTHO05D004072 7.5e-20 101.7 168 37.5
Actinidia37712 Actinidia chinensis HOM05D007742 ORTHO05D004072 6.4e-19 98.6 168 37.5
Rhsim08G0038200 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.1e-18 97.8 217 31.8
MSTRG.25687 Avicennia marina HOM05D007742 ORTHO05D004072 1.2e-17 94.4 149 36.9
Haze_14967 Corylus avellana HOM05D007742 ORTHO05D004072 1.1e-15 87.8 178 32.6
Potri.009G112676 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.5e-15 87.4 170 32.4
Potri.T125604 Populus trichocarpa HOM05D007742 ORTHO05D004072 1.5e-15 87.4 170 32.4
Lj7A618T68 Lonicera japonica HOM05D007742 ORTHO05D004072 2.5e-15 86.7 148 37.8
QL02p068827 Quercus lobata HOM05D007742 ORTHO05D004072 2.5e-15 86.7 157 35.0
SGA_v2.0_scaffold305G47989 Striga asiatica HOM05D007742 ORTHO05D004072 3.6e-14 82.8 166 35.5
vmacro18397 Vaccinium macrocarpon HOM05D007742 ORTHO05D004072 3.6e-14 82.8 210 29.0
QL02p069122 Quercus lobata HOM05D007742 ORTHO05D004072 1.4e-13 80.9 158 34.8
Cfa007153 Carpinus fangiana HOM05D007742 ORTHO05D004072 3.1e-13 79.7 139 33.8
Atru.chr6.2712 Acer truncatum HOM05D007742 ORTHO05D004072 8.9e-13 78.2 146 36.3
QL02p069032 Quercus lobata HOM05D007742 ORTHO05D004072 2.0e-12 77.0 158 34.8
QL02p069084 Quercus lobata HOM05D007742 ORTHO05D004072 2.6e-12 76.6 143 35.0
Sabra09G0085900 Salix brachista HOM05D007742 ORTHO05D004072 5.8e-12 75.5 144 34.0
Sabra09G0086000 Salix brachista HOM05D007742 ORTHO05D004072 9.9e-12 74.7 144 33.3
Sabra09G0086100 Salix brachista HOM05D007742 ORTHO05D004072 1.3e-11 74.3 144 32.6
Rhsim04G0137500 Rhododendron simsii HOM05D007742 ORTHO05D010160 3.8e-11 72.8 166 31.3
Manes.04G094400 Manihot esculenta HOM05D007742 ORTHO05D004072 1.9e-10 70.5 146 33.6
Duzib138G0881 Durio zibethinus HOM05D007742 ORTHO05D004072 4.1e-10 69.3 149 32.2
CANSAT64G0751 Cannabis sativa HOM05D007742 ORTHO05D004072 2.7e-09 66.6 173 31.2
Sc16g0003130 Simmondsia chinensis HOM05D007742 ORTHO05D004072 6.0e-09 65.5 166 30.7
Dinv11564 Davidia involucrata HOM05D026490 ORTHO05D000638 3.9e-08 62.8 156 30.8
QL09p009056 Quercus lobata HOM05D004225 ORTHO05D004728 3.9e-08 62.8 123 32.5
Hund19588 Selenicereus undatus HOM05D007742 ORTHO05D004072 5.1e-08 62.4 157 32.5
Dinv27641 Davidia involucrata HOM05D007742 ORTHO05D004072 6.6e-08 62.0 115 35.7
VMungo0464G0864 Vigna mungo HOM05D007742 ORTHO05D004072 2.5e-07 60.1 205 24.4
Lj1g0006134 Lotus japonicus HOM05D007742 ORTHO05D004072 7.3e-07 58.5 161 26.1


User provided reference genes

Program Settings