Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019998 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.3e-102 373.6 178 100.0
PGSC0003DMG400010976 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.3e-98 361.3 175 97.1
PGSC0003DMG400017392 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.0e-80 301.6 175 79.4
PGSC0003DMG400019996 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.8e-68 260.8 176 70.5
CAN.G656.23 Capsicum annuum HOM05D000006 ORTHO05D000001 3.1e-48 195.7 163 63.2
PGSC0003DMG400017422 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.2e-37 159.1 92 80.4
Nitab4.5_0005962g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.7e-36 156.0 188 45.2
Peaxi162Scf00803g00055 Petunia axillaris HOM05D000007 ORTHO05D000039 3.9e-35 152.1 188 50.0
Peaxi162Scf01075g00018 Petunia axillaris HOM05D000007 ORTHO05D000039 8.7e-35 151.0 186 49.5
Peaxi162Scf00803g00535 Petunia axillaris HOM05D000007 ORTHO05D000039 2.5e-34 149.4 161 51.6
Nitab4.5_0007093g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.4e-34 147.9 179 49.7
Nitab4.5_0018243g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.1e-32 144.1 179 48.0
PGSC0003DMG400003781 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-32 144.1 180 46.7
PGSC0003DMG400046539 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-32 144.1 181 44.8
PGSC0003DMG400046209 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.0e-32 141.0 182 46.2
Sopen10g005230 Solanum pennellii HOM05D000007 ORTHO05D000039 1.2e-31 140.6 181 45.3
Sopen04g033920 Solanum pennellii HOM05D000044 ORTHO05D004555 2.6e-31 139.4 172 46.5
Nitab4.5_0008218g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.5e-31 138.7 187 43.3
Solyc04g080320.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.0e-30 137.5 181 43.6
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.0e-30 137.5 171 46.2
Solyc10g009450.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.7e-30 136.7 182 44.5
PGSC0003DMG400043031 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.2e-30 136.3 183 45.4
PGSC0003DMG400041889 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.5e-30 134.8 175 45.7
Solyc10g009460.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.4e-29 133.7 181 44.2
PGSC0003DMG400043299 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.4e-29 133.7 179 45.3
Peaxi162Scf00016g00259 Petunia axillaris HOM05D000007 ORTHO05D000039 4.2e-29 132.1 193 39.9
Peaxi162Scf00362g01132 Petunia axillaris HOM05D000007 ORTHO05D000039 7.2e-29 131.3 180 46.1
PGSC0003DMG400040421 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.2e-28 130.6 126 46.8
Peaxi162Scf01571g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 1.6e-28 130.2 193 43.0
PGSC0003DMG400003729 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.1e-28 128.3 177 42.9
Peaxi162Scf00074g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 1.0e-27 127.5 193 39.9
Nitab4.5_0004807g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.5e-26 123.6 183 39.9
PGSC0003DMG400012976 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.7e-26 120.9 106 56.6
CAN.G78.127 Capsicum annuum HOM05D000007 ORTHO05D000039 3.7e-25 119.0 184 38.6
Peaxi162Scf01075g00007 Petunia axillaris HOM05D000007 ORTHO05D000039 4.8e-25 118.6 142 46.5
Nitab4.5_0007133g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.2e-25 117.9 122 52.5
PGSC0003DMG400047125 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-24 117.5 151 49.0
Peaxi162Scf01093g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-23 113.6 176 36.9
Peaxi162Scf00063g02221 Petunia axillaris HOM05D000007 ORTHO05D000039 1.3e-22 110.5 172 40.1
Nitab4.5_0002547g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.9e-22 109.4 133 47.4
CAN.G1034.1 Capsicum annuum HOM05D000007 ORTHO05D000039 5.0e-22 108.6 183 37.7
Peaxi162Scf00094g02020 Petunia axillaris HOM05D000007 ORTHO05D000039 1.9e-21 106.7 183 36.1
Peaxi162Scf00658g00067 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-20 103.2 189 35.4
Peaxi162Scf00700g00332 Petunia axillaris HOM05D000007 ORTHO05D000039 3.9e-19 99.0 186 36.0
Nitab4.5_0000270g0310 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.7e-18 94.4 124 43.5
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 4.8e-17 92.0 166 36.7
PGSC0003DMG400022112 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.3e-17 91.7 195 33.8
Peaxi162Scf00700g00039 Petunia axillaris HOM05D000007 ORTHO05D000039 8.2e-17 91.3 207 31.9
Peaxi162Scf01571g00010 Petunia axillaris HOM05D000007 ORTHO05D000039 3.4e-15 85.9 164 34.1
Peaxi162Scf00700g00311 Petunia axillaris HOM05D000007 ORTHO05D000039 5.9e-15 85.1 200 30.5
Peaxi162Scf00658g00066 Petunia axillaris HOM05D000007 ORTHO05D000039 1.3e-14 84.0 134 41.0
Nitab4.5_0000908g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.2e-14 83.2 96 46.9
Peaxi162Scf00458g00008 Petunia axillaris HOM05D000007 ORTHO05D000039 2.9e-14 82.8 120 39.2
CAN.G1077.10 Capsicum annuum HOM05D000007 ORTHO05D000039 6.5e-14 81.6 129 38.8
CAN.G46.3 Capsicum annuum HOM05D000007 ORTHO05D000039 4.2e-13 79.0 190 31.1
Nitab4.5_0011885g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.6e-12 77.0 69 52.2
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-12 77.0 188 32.4
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-12 76.6 187 26.7
Peaxi162Scf00458g00012 Petunia axillaris HOM05D000007 ORTHO05D000039 2.7e-12 76.3 151 33.1
Peaxi162Scf00033g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 1.4e-11 73.9 186 30.1
Peaxi162Scf00094g02018 Petunia axillaris HOM05D000007 ORTHO05D000039 1.8e-11 73.6 100 41.0
CAN.G397.16 Capsicum annuum HOM05D016135 ORTHO05D016171 5.2e-11 72.0 190 29.5
PGSC0003DMG400002700 Solanum tuberosum HOM05D016135 ORTHO05D016171 1.1e-10 70.9 194 28.9
Peaxi162Scf00033g00025 Petunia axillaris HOM05D000007 ORTHO05D000039 1.5e-10 70.5 186 30.1
Sopen09g004210 Solanum pennellii HOM05D016135 ORTHO05D016171 2.0e-10 70.1 195 26.7
CAN.G616.25 Capsicum annuum HOM05D000007 ORTHO05D000039 4.4e-10 68.9 45 71.1
PGSC0003DMG400013031 Solanum tuberosum HOM05D000007 ORTHO05D000039 4.4e-10 68.9 193 31.1
Solyc06g059820.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 5.7e-10 68.6 194 30.9
Peaxi162Scf00033g00214 Petunia axillaris HOM05D000007 ORTHO05D000039 9.7e-10 67.8 188 28.2
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.3e-09 67.4 179 30.2
Nitab4.5_0010416g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.3e-09 67.4 194 28.9
Nitab4.5_0001530g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.7e-09 67.0 187 26.7
Peaxi162Scf00066g01632 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-09 67.0 178 32.0
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 2.2e-09 66.6 149 31.5
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-09 66.6 186 31.2
Nitab4.5_0008120g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.2e-09 66.6 190 31.1
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 2.8e-09 66.2 186 31.7
PGSC0003DMG400024836 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.7e-09 65.9 186 32.3
Thecc.10G092800 Theobroma cacao HOM05D000007 ORTHO05D000039 3.7e-09 65.9 148 35.8
Sopen06g019900 Solanum pennellii HOM05D000007 ORTHO05D000039 4.8e-09 65.5 187 28.9
Nitab4.5_0013238g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.2e-09 64.7 187 26.7
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 8.2e-09 64.7 192 25.5
Solyc06g059810.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.1e-08 64.3 185 28.1
Nitab4.5_0000174g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-08 63.9 190 31.6
Peaxi162Scf00326g00043 Petunia axillaris HOM05D000007 ORTHO05D000039 1.4e-08 63.9 199 25.1
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 2.4e-08 63.2 188 31.4
Sopen06g019890 Solanum pennellii HOM05D000007 ORTHO05D000039 2.4e-08 63.2 192 28.1
CAN.G78.104 Capsicum annuum HOM05D000007 ORTHO05D000039 4.1e-08 62.4 89 39.3
Nitab4.5_0001482g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.1e-08 62.4 98 36.7
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 5.3e-08 62.0 192 26.6
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 7.0e-08 61.6 180 31.1
Cfa007565 Carpinus fangiana HOM05D000513 ORTHO05D005338 9.1e-08 61.2 145 32.4
PGSC0003DMG400037388 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.1e-08 61.2 86 44.2
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 1.2e-07 60.8 168 28.6
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 1.6e-07 60.5 180 32.2
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.0e-07 60.1 180 30.6
Dinv33763 Davidia involucrata HOM05D000001 ORTHO05D000003 4.5e-07 58.9 120 31.7
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 4.5e-07 58.9 185 31.4
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 5.9e-07 58.5 151 31.8
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 5.9e-07 58.5 188 29.3
Migut.M00308 Erythranthe guttata HOM05D000007 ORTHO05D000039 5.9e-07 58.5 165 31.5
Lj5C747T4 Lonicera japonica HOM05D000007 ORTHO05D000039 5.9e-07 58.5 199 27.6
Lju41C15T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-06 57.8 93 38.7
Nitab4.5_0001530g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.0e-06 57.8 122 31.1
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.0e-06 57.8 185 31.4
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.0e-06 57.8 185 31.4
Ciclev10011921m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.2e-06 56.6 197 27.4
FvH4_6g06850 Fragaria vesca HOM05D000007 ORTHO05D000039 2.2e-06 56.6 213 25.8
MD15G1153400 Malus domestica HOM05D000007 ORTHO05D000039 2.2e-06 56.6 168 28.0
Lj2P997T15 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-06 56.2 201 26.9
Peaxi162Scf01475g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 2.9e-06 56.2 168 28.6
Haze_14522 Corylus avellana HOM05D000007 ORTHO05D000039 5.0e-06 55.5 193 28.0
Migut.M00313 Erythranthe guttata HOM05D000007 ORTHO05D000039 5.0e-06 55.5 131 32.8
RcHm_v2.0_Chr3g0456311 Rosa chinensis HOM05D000007 ORTHO05D000039 5.0e-06 55.5 207 27.1
Lj7A0G37 Lonicera japonica HOM05D000007 ORTHO05D000039 6.5e-06 55.1 103 33.0
Cpa.g.sc51.32 Carica papaya HOM05D000007 ORTHO05D000039 8.5e-06 54.7 151 29.1
Lju41C15G6 Lonicera japonica HOM05D000007 ORTHO05D000039 8.5e-06 54.7 66 45.5


User provided reference genes

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