Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019894 Solanum tuberosum HOM05D002758 ORTHO05D002885 6.4e-71 270.8 151 100.0
Sopen07g004170 Solanum pennellii HOM05D002758 ORTHO05D002885 1.2e-61 240.0 151 88.1
Solyc07g008280.4 Solanum lycopersicum HOM05D002758 ORTHO05D002885 1.6e-61 239.6 151 88.7
CAN.G403.8 Capsicum annuum HOM05D002758 ORTHO05D002885 1.1e-54 216.9 151 79.5
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 2.2e-39 166.0 153 69.9
Peaxi162Scf00046g00524 Petunia axillaris HOM05D002758 ORTHO05D002885 4.8e-34 148.3 154 66.2
Nitab4.5_0006661g0030 Nicotiana tabacum HOM05D002758 ORTHO05D002885 4.4e-27 125.2 100 73.0
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 1.8e-25 119.8 154 52.6
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 4.2e-22 108.6 155 55.5
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 6.1e-21 104.8 152 49.3
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 2.3e-20 102.8 154 51.3
Cc06_g08410 Coffea canephora HOM05D002758 ORTHO05D002885 3.9e-20 102.1 151 50.3
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 6.7e-20 101.3 153 51.0
SalBow1G1971 Salvia bowleyana HOM05D002758 ORTHO05D002885 1.5e-19 100.1 152 51.3
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 3.3e-19 99.0 154 51.3
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 3.3e-19 99.0 147 51.0
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 2.8e-18 95.9 157 45.2
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 1.1e-17 94.0 157 47.1
HanXRQChr10g0315561 Helianthus annuus HOM05D002758 ORTHO05D002885 1.8e-17 93.2 152 44.7
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 1.2e-16 90.5 158 43.7
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 1.2e-16 90.5 157 45.9
Oeu058050.1 Olea europaea HOM05D002758 ORTHO05D002885 1.6e-16 90.1 154 51.9
GSVIVG01015544001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.6e-16 90.1 162 48.1
Lsat_1_v5_gn_5_95300 Lactuca sativa HOM05D002758 ORTHO05D002885 2.0e-16 89.7 153 47.1
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 2.6e-16 89.4 152 44.7
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 3.5e-16 89.0 160 44.4
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 4.5e-16 88.6 159 46.5
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 5.9e-16 88.2 153 49.0
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 1.7e-15 86.7 148 43.2
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 2.2e-15 86.3 156 46.8
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 3.8e-15 85.5 154 44.8
CANSAT11G2365 Cannabis sativa HOM05D002758 ORTHO05D002885 5.0e-15 85.1 157 45.2
DCAR_014886 Daucus carota HOM05D002758 ORTHO05D002885 5.0e-15 85.1 146 45.9
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 8.5e-15 84.3 160 45.0
MSTRG.10674 Avicennia marina HOM05D002758 ORTHO05D002885 1.5e-14 83.6 156 46.2
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 1.5e-14 83.6 149 47.0
QL02p088621 Quercus lobata HOM05D002758 ORTHO05D002885 1.5e-14 83.6 157 43.9
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 2.5e-14 82.8 156 44.2
CSS0022572 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 3.2e-14 82.4 157 46.5
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 4.2e-14 82.0 160 44.4
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 4.2e-14 82.0 155 43.9
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 4.2e-14 82.0 155 39.4
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 5.5e-14 81.6 164 40.9
TPR.G26478 Trifolium pratense HOM05D002758 ORTHO05D002885 5.5e-14 81.6 166 44.0
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 7.2e-14 81.3 157 46.5
ECA234G1831 Erigeron canadensis HOM05D002758 ORTHO05D002885 1.2e-13 80.5 150 40.0
CiPaw.03G244800 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.1e-13 79.7 164 45.1
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 2.1e-13 79.7 158 43.0
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 2.7e-13 79.3 156 46.8
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.7e-13 79.3 151 47.0
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.7e-13 79.3 151 47.0
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.7e-13 79.3 151 47.0
CiPaw.04G171600 Carya illinoinensis HOM05D002758 ORTHO05D002885 3.6e-13 79.0 153 45.8
PGR142G4319 Punica granatum HOM05D002758 ORTHO05D002885 3.6e-13 79.0 181 45.3
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 4.7e-13 78.6 157 40.8
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 6.1e-13 78.2 157 43.9
DCAR_020919 Daucus carota HOM05D002758 ORTHO05D002885 8.0e-13 77.8 151 47.0
Lj4g0007884 Lotus japonicus HOM05D002758 ORTHO05D002885 1.4e-12 77.0 159 43.4
Phvul.003G165200 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 1.4e-12 77.0 156 41.0
Migut.I00776 Erythranthe guttata HOM05D002758 ORTHO05D002885 2.3e-12 76.3 158 41.8
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-12 76.3 156 42.3
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-12 76.3 156 44.9
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 2.3e-12 76.3 160 42.5
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 2.3e-12 76.3 148 43.9
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 3.0e-12 75.9 159 44.7
Lsat_1_v5_gn_7_45161 Lactuca sativa HOM05D002758 ORTHO05D002885 3.0e-12 75.9 155 43.9
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 4.0e-12 75.5 157 43.3
Haze_25567 Corylus avellana HOM05D002758 ORTHO05D002885 4.0e-12 75.5 157 43.3
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.0e-12 75.5 155 43.9
VMungo1215G1272 Vigna mungo HOM05D002758 ORTHO05D002885 4.0e-12 75.5 156 42.3
HanXRQChr05g0138371 Helianthus annuus HOM05D002758 ORTHO05D002885 5.2e-12 75.1 157 44.6
HanXRQChr05g0140201 Helianthus annuus HOM05D002758 ORTHO05D002885 5.2e-12 75.1 157 44.6
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 6.7e-12 74.7 153 41.2
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 8.8e-12 74.3 155 38.1
ClCG06G011200 Citrullus lanatus HOM05D002758 ORTHO05D002885 1.2e-11 73.9 152 38.2
HanXRQChr04g0096561 Helianthus annuus HOM05D002758 ORTHO05D002885 1.2e-11 73.9 159 40.9
FAN26G2290 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.5e-11 73.6 155 43.2
ECA240G3055 Erigeron canadensis HOM05D002758 ORTHO05D002885 2.0e-11 73.2 144 41.0
FvH4_1g03160 Fragaria vesca HOM05D002758 ORTHO05D002885 2.0e-11 73.2 155 43.9
FAN19G2709 Fragaria x ananassa HOM05D002758 ORTHO05D002885 2.0e-11 73.2 153 43.1
Manes.14G132900 Manihot esculenta HOM05D002758 ORTHO05D002885 2.0e-11 73.2 149 45.6
Lsat_1_v5_gn_8_58521 Lactuca sativa HOM05D002758 ORTHO05D002885 2.6e-11 72.8 155 43.2
Sabra06G0051500 Salix brachista HOM05D002758 ORTHO05D002885 5.7e-11 71.6 159 40.9
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 7.5e-11 71.2 162 38.3
TWI32G0299 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 7.5e-11 71.2 151 43.7
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 9.7e-11 70.9 155 41.3
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 9.7e-11 70.9 156 40.4
Migut.K00449 Erythranthe guttata HOM05D002758 ORTHO05D002885 9.7e-11 70.9 158 44.3
FAN28G2446 Fragaria x ananassa HOM05D000315 ORTHO05D001379 9.7e-11 70.9 150 43.3
Sed0027515 Sechium edule HOM05D002758 ORTHO05D002885 9.7e-11 70.9 150 37.3
MELO3C010338.2 Cucumis melo HOM05D002758 ORTHO05D002885 1.3e-10 70.5 153 40.5
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.2e-10 69.7 146 39.0
Peaxi162Scf00332g00756 Petunia axillaris HOM05D002758 ORTHO05D002885 2.8e-10 69.3 154 39.6
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 3.7e-10 68.9 155 40.0
RcHm_v2.0_Chr2g0088291 Rosa chinensis HOM05D002758 ORTHO05D002885 3.7e-10 68.9 155 42.6
Sed0025517 Sechium edule HOM05D002758 ORTHO05D002885 3.7e-10 68.9 158 39.9
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 3.7e-10 68.9 169 34.9
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 6.3e-10 68.2 156 40.4
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 8.2e-10 67.8 155 41.9
Nitab4.5_0005728g0010 Nicotiana tabacum HOM05D002758 ORTHO05D002885 8.2e-10 67.8 160 38.1
Solyc03g116630.3 Solanum lycopersicum HOM05D002758 ORTHO05D002885 1.1e-09 67.4 163 39.3
Cfa003385 Carpinus fangiana HOM05D002758 ORTHO05D002885 1.4e-09 67.0 158 41.8
CsaV3_1G030210 Cucumis sativus L. HOM05D002758 ORTHO05D002885 1.4e-09 67.0 153 39.2
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 1.8e-09 66.6 147 37.4
Nitab4.5_0001764g0140 Nicotiana tabacum HOM05D002758 ORTHO05D002885 1.8e-09 66.6 152 37.5
MSTRG.11135 Avicennia marina HOM05D002758 ORTHO05D002885 3.1e-09 65.9 163 37.4
Thecc.06G021700 Theobroma cacao HOM05D002758 ORTHO05D002885 3.1e-09 65.9 151 37.1
Cc04_g04270 Coffea canephora HOM05D002758 ORTHO05D002885 4.1e-09 65.5 162 38.3
TWI63G1461 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 4.1e-09 65.5 148 42.6
Glyma.17G114300 Glycine max HOM05D002758 ORTHO05D002885 7.0e-09 64.7 156 40.4
HanXRQChr09g0241961 Helianthus annuus HOM05D002758 ORTHO05D002885 9.1e-09 64.3 152 36.8
TWI18G1221 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.2e-08 63.9 158 38.6
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 1.2e-08 63.9 157 36.9
Glyma.13G166500 Glycine max HOM05D002758 ORTHO05D002885 2.0e-08 63.2 158 43.7
Sopen03g035550 Solanum pennellii HOM05D002758 ORTHO05D002885 2.0e-08 63.2 160 36.9
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 2.0e-08 63.2 141 36.9
Gohir.D10G077100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.7e-08 62.8 157 36.3
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 3.5e-08 62.4 155 39.4
PGSC0003DMG400000615 Solanum tuberosum HOM05D002758 ORTHO05D002885 3.5e-08 62.4 158 36.7
DCAR_017810 Daucus carota HOM05D002758 ORTHO05D002885 4.5e-08 62.0 140 34.3
QL05p029455 Quercus lobata HOM05D002758 ORTHO05D002885 4.5e-08 62.0 146 37.7
Sc18g0000570 Simmondsia chinensis HOM05D002758 ORTHO05D002885 4.5e-08 62.0 161 38.5
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 5.9e-08 61.6 147 38.1
COL.COLO4_35114 Corchorus olitorius HOM05D002758 ORTHO05D002885 7.7e-08 61.2 149 38.3
Cpa.g.sc46.5 Carica papaya HOM05D002758 ORTHO05D002885 1.3e-07 60.5 188 36.2
Gohir.A05G125833 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-07 60.5 158 35.4
Gohir.A05G125900 Gossypium hirsutum HOM05D002758 ORTHO05D002885 1.3e-07 60.5 158 35.4
BcaC08g44003 Brassica carinata HOM05D002758 ORTHO05D002885 2.2e-07 59.7 152 38.8
Lalb_Chr07g0178991 Lupinus albus HOM05D002758 ORTHO05D002885 2.9e-07 59.3 153 36.6
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 3.8e-07 58.9 153 37.3
COL.COLO4_12950 Corchorus olitorius HOM05D002758 ORTHO05D002885 3.8e-07 58.9 156 35.3
Gohir.D05G126800 Gossypium hirsutum HOM05D002758 ORTHO05D002885 3.8e-07 58.9 158 34.8
Gorai.011G083300 Gossypium raimondii HOM05D002758 ORTHO05D002885 3.8e-07 58.9 157 35.7
CiPaw.01G246400 Carya illinoinensis HOM05D002758 ORTHO05D002885 5.0e-07 58.5 157 39.5
ClCG07G012650 Citrullus lanatus HOM05D002758 ORTHO05D002885 5.0e-07 58.5 145 40.0
Potri.001G192800 Populus trichocarpa HOM05D002758 ORTHO05D002885 5.0e-07 58.5 152 40.8
A05p18910 Brassica napus HOM05D002758 ORTHO05D002885 8.5e-07 57.8 152 38.8
Cpa.g.sc10.256 Carica papaya HOM05D002758 ORTHO05D002885 8.5e-07 57.8 157 33.8
Prupe.3G084900 Prunus persica HOM05D002758 ORTHO05D002885 8.5e-07 57.8 151 37.1
Sc10g0005850 Simmondsia chinensis HOM05D002758 ORTHO05D002885 1.1e-06 57.4 154 33.1
SGA_v2.0_scaffold5G02683 Striga asiatica HOM05D002758 ORTHO05D002885 1.5e-06 57.0 161 36.0
Atru.chr7.1142 Acer truncatum HOM05D002758 ORTHO05D002885 1.9e-06 56.6 94 53.2
THA.LOC104808985 Tarenaya hassleriana HOM05D002758 ORTHO05D002885 2.5e-06 56.2 152 35.5
CANSAT56G1388 Cannabis sativa HOM05D002758 ORTHO05D002885 3.2e-06 55.8 155 35.5
FAN02G3379 Fragaria x ananassa HOM05D002758 ORTHO05D002885 3.2e-06 55.8 151 33.1
Gorai.009G130900 Gossypium raimondii HOM05D002758 ORTHO05D002885 4.2e-06 55.5 158 34.8
Duzib160G0702 Durio zibethinus HOM05D002758 ORTHO05D002885 5.5e-06 55.1 155 34.2
FAN14G2484 Fragaria x ananassa HOM05D002758 ORTHO05D002885 5.5e-06 55.1 151 32.5
Nitab4.5_0000373g0020 Nicotiana tabacum HOM05D002758 ORTHO05D002885 7.2e-06 54.7 155 34.2
Sabra18G0111200 Salix brachista HOM05D002758 ORTHO05D005776 7.2e-06 54.7 160 37.5
Ciclev10026775m.g Citrus clementina HOM05D002758 ORTHO05D002885 9.4e-06 54.3 146 30.8
Oeu027807.1 Olea europaea HOM05D002758 ORTHO05D002885 9.4e-06 54.3 154 37.0


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