Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 1.5e-46 189.1 94 100.0
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 2.8e-40 168.3 94 91.5
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 2.0e-22 109.0 101 62.4
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 7.6e-22 107.1 101 60.4
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 4.9e-21 104.4 101 57.4
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.5e-14 81.3 93 51.6
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 7.7e-14 80.5 93 51.6
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 5.5e-12 74.3 101 46.5
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.1e-11 70.9 98 43.9
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.1e-11 70.9 98 43.9
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 2.3e-10 68.9 86 50.0
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 2.0e-09 65.9 90 46.7
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 2.5e-09 65.5 83 48.2
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 4.3e-09 64.7 95 42.1
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 7.4e-09 63.9 94 43.6
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 9.7e-09 63.5 78 47.4
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 9.7e-09 63.5 90 47.8
Atru.chr9.252 Acer truncatum HOM05D007106 ORTHO05D007770 1.7e-08 62.8 87 46.0
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 1.7e-08 62.8 90 48.9
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 2.2e-08 62.4 94 44.7
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 2.8e-08 62.0 95 44.2
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 3.7e-08 61.6 93 46.2
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 3.7e-08 61.6 95 47.4
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.7e-08 61.6 95 47.4
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 3.7e-08 61.6 95 40.0
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.1e-07 60.1 103 41.7
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.1e-07 60.1 92 40.2
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 1.1e-07 60.1 92 40.2
Migut.I00186 Erythranthe guttata HOM05D007106 ORTHO05D007770 1.8e-07 59.3 51 56.9
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 1.8e-07 59.3 76 43.4
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 1.8e-07 59.3 94 43.6
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 3.1e-07 58.5 95 46.3
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 4.1e-07 58.2 98 41.8
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 4.1e-07 58.2 95 40.0
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 4.1e-07 58.2 78 43.6
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 5.3e-07 57.8 95 44.2
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 5.3e-07 57.8 98 40.8
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 6.9e-07 57.4 95 43.2
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 9.1e-07 57.0 100 42.0
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 9.1e-07 57.0 100 41.0
Thhalv10010864m.g Eutrema salsugineum HOM05D012999 ORTHO05D007770 1.2e-06 56.6 87 41.4
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 1.2e-06 56.6 89 44.9
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 1.2e-06 56.6 98 35.7
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 1.5e-06 56.2 97 43.3
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 2.6e-06 55.5 88 43.2
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 2.6e-06 55.5 88 43.2
Sopen12g025630 Solanum pennellii HOM05D007106 ORTHO05D007770 3.4e-06 55.1 77 41.6
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 4.5e-06 54.7 108 38.0
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 5.9e-06 54.3 90 42.2
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 5.9e-06 54.3 27 77.8
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 7.7e-06 53.9 75 41.3
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 7.7e-06 53.9 105 41.0
Solyc07g150120.1 Solanum lycopersicum HOM05D007106 ORTHO05D007770 7.7e-06 53.9 77 41.6
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 7.7e-06 53.9 79 44.3


User provided reference genes

Program Settings