Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 5.7e-220 767.3 396 100.0
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 4.3e-207 724.5 384 97.1
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 3.6e-206 721.5 384 96.9
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 2.1e-174 615.9 355 89.6
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 9.3e-146 520.8 400 73.8
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 3.6e-137 492.3 396 68.4
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 1.4e-136 490.3 386 68.9
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 5.1e-136 488.4 376 71.3
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 1.7e-134 483.4 391 67.8
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.8e-133 479.9 372 70.2
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 2.2e-131 473.0 408 65.4
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 1.1e-130 470.7 401 66.8
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 1.2e-129 467.2 370 67.3
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 1.6e-129 466.8 365 69.3
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 4.7e-129 465.3 285 83.5
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 7.9e-129 464.5 352 70.2
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 6.7e-128 461.5 374 67.9
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 1.1e-127 460.7 388 66.5
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 7.4e-127 458.0 280 83.6
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 7.4e-127 458.0 333 73.9
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 1.3e-126 457.2 379 67.3
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 3.7e-126 455.7 381 66.7
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 4.8e-126 455.3 284 81.3
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 6.3e-126 454.9 400 64.0
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 8.2e-126 454.5 401 63.8
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 1.4e-125 453.8 382 66.2
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 3.1e-125 452.6 295 77.3
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 3.1e-125 452.6 391 66.8
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 4.1e-125 452.2 280 82.9
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 5.3e-125 451.8 292 80.1
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 7.0e-125 451.4 288 80.9
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.5e-124 450.3 287 79.8
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 1.5e-124 450.3 367 67.6
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 1.5e-124 450.3 395 64.6
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 2.0e-124 449.9 290 80.3
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 3.5e-124 449.1 326 73.0
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 4.5e-124 448.7 363 66.7
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.0e-123 447.6 372 68.5
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 1.0e-123 447.6 379 65.4
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 2.2e-123 446.4 283 80.6
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 3.8e-123 445.7 390 64.6
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 3.8e-123 445.7 287 79.1
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.8e-123 445.7 286 79.0
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 6.5e-123 444.9 386 63.5
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 8.5e-123 444.5 393 64.1
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 8.5e-123 444.5 329 72.3
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.1e-122 444.1 380 63.7
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.4e-122 443.7 389 62.0
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.4e-122 443.7 318 74.2
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 1.4e-122 443.7 297 77.1
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 2.5e-122 443.0 287 78.7
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.5e-122 443.0 280 80.4
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.5e-122 443.0 280 80.4
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 4.2e-122 442.2 274 81.4
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 4.2e-122 442.2 294 75.9
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.6e-121 440.3 273 81.3
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 2.7e-121 439.5 287 78.0
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 1.0e-120 437.6 317 73.2
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 3.9e-120 435.6 386 65.0
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 3.9e-120 435.6 366 65.6
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 3.9e-120 435.6 247 86.6
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 8.8e-120 434.5 319 70.8
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 2.0e-119 433.3 254 84.6
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 3.3e-119 432.6 346 66.8
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 4.4e-119 432.2 374 65.2
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 4.4e-119 432.2 283 78.4
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 9.7e-119 431.0 396 59.6
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 1.7e-118 430.3 321 71.3
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 2.2e-118 429.9 398 62.8
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 2.8e-118 429.5 382 60.7
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 3.1e-117 426.0 324 70.7
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 3.1e-117 426.0 458 54.8
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 4.1e-117 425.6 307 72.6
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 9.1e-117 424.5 241 85.1
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 1.6e-116 423.7 377 61.3
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 1.6e-116 423.7 378 62.4
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 1.6e-116 423.7 279 76.7
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.6e-116 422.9 393 60.1
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 3.5e-116 422.5 367 63.8
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 4.5e-116 422.2 342 67.3
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 5.9e-116 421.8 279 76.3
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 7.7e-116 421.4 392 59.7
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 7.7e-116 421.4 284 76.1
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 7.7e-116 421.4 403 60.3
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 1.7e-115 420.2 384 60.9
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 1.7e-115 420.2 285 75.1
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 1.7e-115 420.2 292 75.0
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 2.2e-115 419.9 377 61.0
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 2.2e-115 419.9 395 60.0
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 2.2e-115 419.9 284 75.7
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 2.9e-115 419.5 393 59.8
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 3.8e-115 419.1 374 61.0
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 3.8e-115 419.1 389 60.7
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 5.0e-115 418.7 284 75.7
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 5.0e-115 418.7 326 69.9
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 8.5e-115 417.9 377 61.3
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 8.5e-115 417.9 383 60.6
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 8.5e-115 417.9 230 86.1
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 8.5e-115 417.9 313 71.2
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 1.1e-114 417.5 383 59.3
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 4.2e-114 415.6 396 63.9
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 5.5e-114 415.2 281 75.4
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 1.6e-113 413.7 307 69.4
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 1.6e-113 413.7 273 76.6
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.7e-113 412.9 371 63.3
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 3.6e-113 412.5 395 58.7
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 4.7e-113 412.1 368 62.2
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 1.4e-112 410.6 253 79.4
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 4.0e-112 409.1 372 63.7
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 6.7e-112 408.3 273 75.8
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 1.2e-111 407.5 306 69.0
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.5e-111 407.1 395 62.0
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 1.5e-111 407.1 462 55.4
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 1.7e-110 403.7 358 63.7
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 2.2e-110 403.3 399 57.9
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 1.4e-109 400.6 405 57.8
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.8e-109 400.2 394 62.4
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 5.3e-109 398.7 320 67.8
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 7.0e-109 398.3 331 66.2
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 2.7e-108 396.4 346 63.3
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 4.5e-108 395.6 384 57.6
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 5.9e-108 395.2 224 84.8
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 7.7e-108 394.8 212 90.1
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 1.3e-107 394.0 264 75.0
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.7e-107 393.7 264 74.6
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 6.5e-107 391.7 388 61.1
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 3.2e-106 389.4 389 57.6
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 1.8e-104 383.6 201 91.5
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.3e-102 377.5 253 75.5
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 7.7e-100 368.2 232 79.3
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 2.8e-97 359.8 245 75.5
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 4.7e-97 359.0 215 77.7
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 7.5e-95 351.7 276 65.6
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 1.3e-94 350.9 378 54.2
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 2.8e-94 349.7 372 55.1
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 1.3e-86 324.3 260 63.1
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 2.2e-86 323.6 327 54.4
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 2.9e-86 323.2 345 52.5
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 5.4e-85 318.9 350 52.0
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 3.5e-84 316.2 328 57.9
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 7.0e-77 292.0 175 83.4
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 7.8e-76 288.5 404 49.5
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.5e-74 284.3 316 53.2
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 8.9e-72 275.0 148 89.2
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-71 273.9 211 61.6
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 3.5e-68 263.1 195 72.8
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 8.6e-67 258.5 219 65.3
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 1.2e-65 254.6 164 75.0
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 8.9e-64 248.4 390 45.1
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 3.0e-59 233.4 313 47.9
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.1e-56 223.4 140 78.6
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 3.9e-51 206.5 140 71.4
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 6.6e-51 205.7 133 74.4
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 8.1e-49 198.7 105 89.5
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 2.4e-48 197.2 132 72.0
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 2.7e-44 183.7 123 73.2
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.5e-44 183.3 96 91.7
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 3.0e-43 180.3 166 62.7
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 2.5e-42 177.2 135 68.1
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 6.9e-40 169.1 213 42.3
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 1.0e-38 165.2 96 83.3
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 9.0e-32 142.1 78 89.7
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 2.9e-30 137.1 76 84.2
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 2.5e-29 134.0 96 69.8
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 4.2e-29 133.3 251 32.7
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 2.1e-28 131.0 210 35.7
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 3.9e-27 126.7 65 93.8
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 5.3e-24 116.3 108 63.0
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 7.7e-23 112.5 68 80.9
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 8.5e-22 109.0 100 58.0
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 1.1e-21 108.6 53 94.3
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 4.6e-20 103.2 63 73.0
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 1.2e-12 78.6 44 79.5
Lalb_Chr22g0350671 Lupinus albus HOM05D003665 ORTHO05D004387 7.9e-12 75.9 43 86.0
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 2.4e-08 64.3 36 80.6
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 3.5e-07 60.5 33 84.8
Lsat_1_v5_gn_4_144501 Lactuca sativa HOM05D000361 ORTHO05D005006 1.0e-06 58.9 33 81.8
Oeu002465.1 Olea europaea HOM05D003665 ORTHO05D289337 2.9e-06 57.4 195 35.4


User provided reference genes

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