Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 7.0e-119 430.6 217 100.0
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 2.5e-108 395.6 217 94.0
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 2.3e-106 389.0 217 93.1
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.0e-70 268.1 214 67.8
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 5.2e-66 255.0 216 65.3
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.4e-58 230.3 220 57.3
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 8.9e-58 227.6 227 58.6
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 8.9e-58 227.6 216 58.3
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.2e-57 227.3 217 59.0
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-57 226.9 220 56.4
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.5e-57 226.9 213 58.2
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 4.4e-57 225.3 216 56.9
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 2.2e-56 223.0 220 55.9
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 2.2e-56 223.0 218 60.1
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 2.9e-56 222.6 222 58.1
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.1e-55 220.7 220 57.3
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 1.4e-55 220.3 214 60.3
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 5.4e-55 218.4 221 59.7
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 5.4e-55 218.4 220 55.0
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 2.7e-54 216.1 217 58.1
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.5e-54 215.7 199 62.3
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.9e-53 212.2 215 59.1
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 4.3e-52 208.8 218 55.5
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 4.3e-52 208.8 219 54.3
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.6e-52 208.4 218 58.3
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 2.1e-51 206.5 218 54.1
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.1e-50 204.1 224 56.7
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 3.1e-50 202.6 217 54.8
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 6.9e-50 201.4 217 56.2
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 1.5e-49 200.3 218 55.0
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.9e-48 196.1 219 51.6
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 8.4e-48 194.5 216 54.2
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 8.4e-48 194.5 219 53.4
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 8.4e-48 194.5 230 52.6
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 1.4e-47 193.7 219 54.3
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 4.2e-47 192.2 216 52.3
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 5.4e-47 191.8 219 53.4
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 7.1e-47 191.4 218 54.6
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 7.1e-47 191.4 218 54.1
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 1.2e-46 190.7 217 54.8
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.7e-46 189.5 221 51.1
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.7e-46 189.5 217 54.8
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 3.5e-46 189.1 237 49.8
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 4.6e-46 188.7 218 53.2
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 7.9e-46 188.0 216 50.9
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 7.9e-46 188.0 219 53.4
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 3.0e-45 186.0 219 50.2
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 3.9e-45 185.7 164 62.2
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 3.9e-45 185.7 222 52.3
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 8.7e-45 184.5 222 50.9
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 8.7e-45 184.5 214 54.2
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.1e-44 184.1 222 50.9
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.5e-44 183.7 219 49.3
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 2.5e-44 183.0 226 51.3
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 4.3e-44 182.2 226 50.4
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 4.3e-44 182.2 218 56.0
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.6e-44 181.8 218 54.6
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 5.6e-44 181.8 218 53.7
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 9.6e-44 181.0 232 50.0
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.6e-43 180.3 214 52.8
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.6e-43 180.3 219 54.3
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 2.1e-43 179.9 227 50.2
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 3.6e-43 179.1 225 49.8
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 1.1e-42 177.6 218 51.8
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.4e-42 177.2 223 50.7
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.4e-42 177.2 214 51.9
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 5.3e-42 175.3 218 51.4
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 9.0e-42 174.5 224 49.1
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 9.0e-42 174.5 216 52.3
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.2e-41 174.1 221 53.4
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 5.8e-41 171.8 198 54.5
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.7e-40 170.2 215 50.7
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 1.7e-40 170.2 219 48.4
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 2.2e-40 169.9 217 51.2
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 3.8e-40 169.1 216 50.0
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 3.8e-40 169.1 217 49.3
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.9e-40 168.7 216 50.0
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 6.4e-40 168.3 220 48.2
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 1.1e-39 167.5 221 48.9
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.1e-39 167.5 222 50.0
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.2e-39 166.0 222 50.9
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 4.2e-39 165.6 216 47.7
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 5.5e-39 165.2 208 48.1
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 7.1e-39 164.9 223 48.4
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 7.1e-39 164.9 219 48.4
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 7.1e-39 164.9 219 48.4
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 9.3e-39 164.5 220 48.6
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.2e-38 164.1 214 48.6
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.2e-38 164.1 216 48.1
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.6e-38 163.7 222 47.3
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 2.1e-38 163.3 217 48.8
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.7e-38 162.9 217 49.3
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.0e-37 161.0 190 48.4
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 1.0e-37 161.0 218 47.2
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.3e-37 159.8 222 45.0
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 3.0e-37 159.5 214 48.1
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 3.0e-37 159.5 214 48.1
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.9e-37 159.1 224 44.6
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.9e-37 159.1 222 45.5
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 8.7e-37 157.9 216 48.1
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 5.6e-36 155.2 217 49.8
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 5.6e-36 155.2 219 47.0
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.6e-35 153.7 221 48.4
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.6e-35 153.7 221 49.8
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 1.1e-34 151.0 227 49.3
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.4e-34 150.6 220 46.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 1.4e-34 150.6 216 45.4
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.4e-34 150.6 251 46.6
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.8e-34 150.2 217 46.5
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 5.3e-34 148.7 244 44.3
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 6.9e-34 148.3 221 46.6
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 1.0e-32 144.4 171 49.1
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 2.2e-32 143.3 216 45.4
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 1.1e-31 141.0 220 43.2
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.4e-31 140.6 221 43.4
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.9e-31 140.2 217 42.4
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.5e-31 138.7 223 43.5
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 5.5e-31 138.7 216 43.5
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 7.1e-31 138.3 219 43.4
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 7.1e-31 138.3 221 44.8
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 2.7e-30 136.3 204 47.1
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 4.6e-30 135.6 224 42.9
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 6.0e-30 135.2 218 43.6
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 1.0e-29 134.4 214 40.7
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.8e-29 133.7 217 42.9
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 1.8e-29 133.7 223 42.6
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 5.1e-29 132.1 191 42.4
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 6.7e-29 131.7 221 41.6
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.9e-28 130.2 219 42.5
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 5.7e-28 128.6 222 41.4
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 7.4e-28 128.3 207 45.9
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.1e-27 126.7 215 42.3
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 4.8e-27 125.6 216 42.6
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 4.1e-26 122.5 217 40.6
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 4.1e-26 122.5 217 40.6
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 2.0e-25 120.2 216 42.1
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 4.5e-25 119.0 218 40.8
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 5.9e-25 118.6 218 41.3
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.0e-24 117.9 227 42.3
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 2.9e-24 116.3 213 39.0
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 1.1e-23 114.4 158 44.9
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 4.2e-23 112.5 222 41.9
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 7.2e-23 111.7 214 38.8
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 7.2e-23 111.7 215 40.5
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 6.1e-22 108.6 282 34.4
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.3e-21 107.5 285 35.4
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 5.1e-21 105.5 186 37.6
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 5.1e-21 105.5 215 38.6
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.5e-20 104.0 226 39.4
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 9.7e-20 101.3 220 40.0
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 2.6e-17 93.2 168 41.7
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.7e-17 91.7 136 39.0
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.3e-16 90.9 220 37.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 2.2e-16 90.1 194 39.7
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 2.1e-14 83.6 66 59.1
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.8e-13 80.5 86 54.7
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 6.7e-13 78.6 187 34.8
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 3.3e-12 76.3 218 35.3
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 1.3e-11 74.3 63 58.7
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 2.8e-11 73.2 115 46.1
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 4.8e-11 72.4 59 64.4
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 5.9e-09 65.5 71 52.1
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 7.7e-09 65.1 113 40.7
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 6.5e-08 62.0 39 69.2
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 3.2e-07 59.7 101 43.6
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 4.2e-07 59.3 87 44.8
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 1.2e-06 57.8 80 47.5


User provided reference genes

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