Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400019310 Solanum tuberosum HOM05D004978 ORTHO05D005621 4.2e-113 411.4 209 100.0
Solyc09g065690.4 Solanum lycopersicum HOM05D004978 ORTHO05D005621 7.4e-110 400.6 209 97.6
Sopen09g027430 Solanum pennellii HOM05D004978 ORTHO05D005621 1.3e-109 399.8 209 97.1
CAN.G433.6 Capsicum annuum HOM05D004978 ORTHO05D005621 8.0e-96 354.0 209 87.1
Nitab4.5_0004115g0020 Nicotiana tabacum HOM05D004978 ORTHO05D005621 8.0e-88 327.4 211 82.0
Nitab4.5_0000459g0120 Nicotiana tabacum HOM05D004978 ORTHO05D005621 3.0e-87 325.5 211 82.0
Peaxi162Scf00259g00051 Petunia axillaris HOM05D004978 ORTHO05D005621 1.0e-82 310.5 211 78.2
Dinv32884 Davidia involucrata HOM05D004978 ORTHO05D005621 3.3e-49 199.1 208 51.0
Rhsim01G0272000 Rhododendron simsii HOM05D004978 ORTHO05D005621 6.8e-47 191.4 198 51.0
Actinidia24924 Actinidia chinensis HOM05D004978 ORTHO05D005621 3.4e-46 189.1 205 50.2
GSVIVG01003120001 Vitis vinifera HOM05D004978 ORTHO05D005621 7.6e-46 188.0 204 49.0
Lj2A1164T58 Lonicera japonica HOM05D004978 ORTHO05D005621 1.6e-43 180.3 193 53.9
Oeu014736.1 Olea europaea HOM05D004978 ORTHO05D005621 1.6e-43 180.3 184 56.0
HanXRQChr04g0113941 Helianthus annuus HOM05D004978 ORTHO05D005621 4.6e-43 178.7 161 57.1
Cc01_g19000 Coffea canephora HOM05D004978 ORTHO05D005621 7.8e-43 177.9 181 55.2
DCAR_002701 Daucus carota HOM05D004978 ORTHO05D005621 7.8e-43 177.9 201 50.2
FAN27G2645 Fragaria x ananassa HOM05D004978 ORTHO05D005621 1.7e-42 176.8 204 49.5
FvH4_2g22940 Fragaria vesca HOM05D004978 ORTHO05D005621 2.3e-42 176.4 204 50.0
MD11G1278700 Malus domestica HOM05D004978 ORTHO05D005621 2.3e-42 176.4 198 50.5
FAN15G0608 Fragaria x ananassa HOM05D004978 ORTHO05D005621 6.6e-42 174.9 204 49.0
FAN24G2655 Fragaria x ananassa HOM05D004978 ORTHO05D005621 6.6e-42 174.9 201 50.2
FAN20G1006 Fragaria x ananassa HOM05D004978 ORTHO05D005621 8.7e-42 174.5 204 49.5
Manes.05G081900 Manihot esculenta HOM05D004978 ORTHO05D005621 1.1e-41 174.1 206 47.6
Gohir.D08G072400 Gossypium hirsutum HOM05D004978 ORTHO05D005621 1.5e-41 173.7 185 50.8
Gorai.004G076600 Gossypium raimondii HOM05D004978 ORTHO05D005621 1.5e-41 173.7 185 50.8
Migut.D00356 Erythranthe guttata HOM05D004978 ORTHO05D005621 1.3e-40 170.6 203 48.8
Gohir.A08G063900 Gossypium hirsutum HOM05D004978 ORTHO05D005621 3.6e-40 169.1 185 49.7
Sc05g0001300 Simmondsia chinensis HOM05D004978 ORTHO05D005621 3.6e-40 169.1 181 51.4
QL01p000805 Quercus lobata HOM05D004978 ORTHO05D005621 4.8e-40 168.7 204 48.5
arahy.Tifrunner.gnm1.ann1.54WUVN Arachis hypogaea HOM05D004978 ORTHO05D005621 8.1e-40 167.9 207 48.3
Aqoxy5G00398 Aquilegia oxysepala HOM05D004978 ORTHO05D005621 1.1e-39 167.5 177 52.5
Nn1g02459 Nelumbo nucifera HOM05D004978 ORTHO05D005621 6.9e-39 164.9 205 44.4
TWI75G1276 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 1.2e-38 164.1 198 48.5
VMungo0720G1640 Vigna mungo HOM05D004978 ORTHO05D005621 1.2e-38 164.1 196 48.0
SGA_v2.0_scaffold1G00534 Striga asiatica HOM05D004978 ORTHO05D005621 1.5e-38 163.7 183 51.4
vmacro14887 Vaccinium macrocarpon HOM05D004978 ORTHO05D005621 1.5e-38 163.7 188 47.9
CiPaw.07G086800 Carya illinoinensis HOM05D004978 ORTHO05D005621 3.4e-38 162.5 204 46.1
Cfa006202 Carpinus fangiana HOM05D004978 ORTHO05D005621 4.4e-38 162.2 215 44.7
MD03G1258100 Malus domestica HOM05D004978 ORTHO05D005621 7.6e-38 161.4 173 52.6
PGR044G1133 Punica granatum HOM05D004978 ORTHO05D005621 9.9e-38 161.0 207 44.9
RcHm_v2.0_Chr6g0289911 Rosa chinensis HOM05D004978 ORTHO05D005621 9.9e-38 161.0 179 48.0
Thecc.01G271500 Theobroma cacao HOM05D004978 ORTHO05D005621 9.9e-38 161.0 179 49.2
Glyma.10G029800 Glycine max HOM05D004978 ORTHO05D005621 1.3e-37 160.6 201 44.3
Ciclev10019332m.g Citrus clementina HOM05D004978 ORTHO05D005621 1.7e-37 160.2 195 43.1
Aa31LG9G14570 Aethionema arabicum HOM05D004978 ORTHO05D005621 2.2e-37 159.8 205 45.9
Atru.chr5.1521 Acer truncatum HOM05D004978 ORTHO05D005621 2.9e-37 159.5 198 43.4
CANSAT25G0263 Cannabis sativa HOM05D004978 ORTHO05D005621 3.8e-37 159.1 183 49.7
QL12p042266 Quercus lobata HOM05D004978 ORTHO05D005621 3.8e-37 159.1 186 50.0
Potri.005G215200 Populus trichocarpa HOM05D004978 ORTHO05D005621 4.9e-37 158.7 213 45.1
Phvul.007G175000 Phaseolus vulgaris HOM05D004978 ORTHO05D005621 8.4e-37 157.9 169 50.9
Psat6g058480 Pisum sativum HOM05D004978 ORTHO05D005621 1.4e-36 157.1 205 45.4
ECA236G1829 Erigeron canadensis HOM05D004978 ORTHO05D005621 3.2e-36 156.0 199 45.7
Medtr1g071300 Medicago truncatula HOM05D004978 ORTHO05D005621 4.2e-36 155.6 198 44.4
Lsat_1_v5_gn_8_93980 Lactuca sativa HOM05D004978 ORTHO05D005621 9.3e-36 154.5 171 49.1
Lalb_Chr02g0142521 Lupinus albus HOM05D004978 ORTHO05D005621 1.6e-35 153.7 208 42.3
PSO210G1189 Papaver somniferum HOM05D004978 ORTHO05D005621 2.1e-35 153.3 193 44.6
PSO832G2480 Papaver somniferum HOM05D004978 ORTHO05D005621 2.7e-35 152.9 199 42.7
ClCG09G007410 Citrullus lanatus HOM05D004978 ORTHO05D005621 4.6e-35 152.1 180 47.8
Sed0003895 Sechium edule HOM05D004978 ORTHO05D005621 4.6e-35 152.1 191 45.5
CARHR193040 Cardamine hirsuta HOM05D004978 ORTHO05D005621 7.8e-35 151.4 213 41.3
COL.COLO4_09187 Corchorus olitorius HOM05D004978 ORTHO05D005621 7.8e-35 151.4 179 48.0
Lj5g0010127 Lotus japonicus HOM05D004978 ORTHO05D005621 1.0e-34 151.0 202 44.6
BcaB01g04842 Brassica carinata HOM05D004978 ORTHO05D005621 1.3e-34 150.6 199 43.2
CDE02G4319 Ceratophyllum demersum HOM05D004978 ORTHO05D005621 1.7e-34 150.2 193 46.1
BcaB01g04828 Brassica carinata HOM05D004978 ORTHO05D005621 3.0e-34 149.4 206 41.7
AL6G31360 Arabidopsis lyrata HOM05D004978 ORTHO05D005621 3.9e-34 149.1 191 44.5
arahy.Tifrunner.gnm1.ann1.ZM38TH Arachis hypogaea HOM05D004978 ORTHO05D005621 6.6e-34 148.3 194 47.4
C03p11220 Brassica napus HOM05D004978 ORTHO05D005621 8.7e-34 147.9 206 41.3
BolC3t13593H Brassica oleracea HOM05D004978 ORTHO05D005621 8.7e-34 147.9 206 41.3
Zm00001eb370120 Zea mays HOM05D004978 ORTHO05D005621 8.7e-34 147.9 173 49.7
TWI12G0244 Tripterygium wilfordii HOM05D004978 ORTHO05D005621 1.5e-33 147.1 193 44.6
AT5G19840 Arabidopsis thaliana HOM05D004978 ORTHO05D005621 3.3e-33 146.0 197 43.7
A03p09660 Brassica napus HOM05D004978 ORTHO05D005621 3.3e-33 146.0 201 40.8
Eucgr.K03324 Eucalyptus grandis HOM05D004978 ORTHO05D005621 2.1e-32 143.3 188 46.3
Haze_04642 Corylus avellana HOM05D004978 ORTHO05D005621 2.8e-32 142.9 185 43.8
unitig_0.g1132 Utricularia gibba HOM05D004978 ORTHO05D005621 8.1e-32 141.4 230 39.1
Ca_09727_v3 Cicer arietinum L. HOM05D004978 ORTHO05D005621 1.4e-31 140.6 189 44.4
Cpa.g.sc52.118 Carica papaya HOM05D004978 ORTHO05D005621 3.1e-31 139.4 170 46.5
AUR62011971 Chenopodium quinoa HOM05D004978 ORTHO05D005621 5.3e-31 138.7 230 38.3
CsaV3_7G027890 Cucumis sativus L. HOM05D004978 ORTHO05D005621 5.3e-31 138.7 187 43.9
BraA03t10282Z Brassica rapa HOM05D004978 ORTHO05D005621 5.8e-30 135.2 218 37.6
Carub.0006s1819 Capsella rubella HOM05D004978 ORTHO05D005621 5.8e-30 135.2 195 38.5
Thhalv10013262m.g Eutrema salsugineum HOM05D004978 ORTHO05D005621 9.9e-30 134.4 183 42.6
AUR62032283 Chenopodium quinoa HOM05D004978 ORTHO05D005621 2.2e-29 133.3 231 37.2
Sp6g24570 Schrenkiella parvula HOM05D004978 ORTHO05D005621 2.9e-29 132.9 187 41.7
Sed0016751 Sechium edule HOM05D004978 ORTHO05D005621 6.4e-29 131.7 166 46.4
ATR0665G047 Amborella trichopoda HOM05D004978 ORTHO05D005621 1.2e-27 127.5 207 40.1
Prupe.8G234700 Prunus persica HOM05D004978 ORTHO05D005621 2.7e-27 126.3 87 67.8
Duzib133G0140 Durio zibethinus HOM05D004978 ORTHO05D005621 3.5e-27 125.9 97 60.8
MELO3C015807.2 Cucumis melo HOM05D004978 ORTHO05D005621 6.0e-27 125.2 164 43.9
HPP92_022057 Vanilla planifolia HOM05D004978 ORTHO05D005621 8.7e-26 121.3 181 42.0
TAR636G2873 Trochodendron aralioides HOM05D004978 ORTHO05D005621 3.3e-25 119.4 90 64.4
Hund09547 Selenicereus undatus HOM05D004978 ORTHO05D005621 9.6e-25 117.9 91 60.4
Glyma.02G144333 Glycine max HOM05D004978 ORTHO05D005621 4.0e-23 112.5 83 61.4
Ah.11g050220 Amaranthus hybridus HOM05D004978 ORTHO05D005621 1.5e-22 110.5 230 32.6
SMO343G0029 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 1.7e-21 107.1 92 56.5
TPR.G34891 Trifolium pratense HOM05D004978 ORTHO05D005621 8.4e-21 104.8 73 64.4
SMO367G0146 Selaginella moellendorffii HOM05D004978 ORTHO05D005621 1.4e-20 104.0 92 54.3
SMO367G0062 Selaginella moellendorffii HOM05D006097 ORTHO05D005621 5.5e-20 102.1 92 53.3
Mapoly0003s0071 Marchantia polymorpha HOM05D004978 ORTHO05D005621 2.3e-18 96.7 170 34.7
SEGI_31795 Sequoiadendron giganteum HOM05D004978 ORTHO05D005621 8.7e-18 94.7 75 57.3
Lalb_Chr06g0162781 Lupinus albus HOM05D004978 ORTHO05D005621 1.7e-13 80.5 64 53.1
Pp3c26_13750 Physcomitrium patens HOM05D004978 ORTHO05D005621 1.1e-12 77.8 184 33.2
AagrBONN_evm.TU.Sc2ySwM_117.2029 Anthoceros agrestis HOM05D004978 ORTHO05D005621 3.5e-11 72.8 199 28.6
CSS0039116 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 1.8e-07 60.5 119 34.5
CSS0038001 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 7.7e-06 55.1 67 44.8


User provided reference genes

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