Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.9e-59 232.3 116 100.0
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 8.7e-52 206.8 116 90.5
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.1e-51 206.5 116 90.5
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 4.5e-48 194.5 116 86.2
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.0e-47 193.4 116 86.2
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.1e-46 189.9 116 82.8
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 6.7e-36 154.1 95 75.8
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.4e-35 151.4 94 77.7
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 5.7e-35 151.0 94 77.7
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.7e-35 151.0 94 77.7
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.7e-35 151.0 94 77.7
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 9.7e-35 150.2 116 65.5
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.8e-34 148.7 94 76.6
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 2.8e-34 148.7 96 77.1
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 3.7e-34 148.3 102 71.6
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 3.7e-34 148.3 119 64.7
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.4e-33 146.4 119 66.4
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.4e-33 145.6 116 66.4
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.1e-33 144.8 116 65.5
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 5.3e-33 144.4 116 63.8
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 5.3e-33 144.4 124 62.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.2e-32 143.3 99 71.7
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.5e-32 142.9 117 65.0
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.6e-32 142.1 90 78.9
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 3.5e-32 141.7 103 68.0
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.5e-32 141.7 116 62.9
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.9e-32 141.0 80 82.5
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 5.9e-32 141.0 116 63.8
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 7.7e-32 140.6 116 63.8
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 7.7e-32 140.6 90 75.6
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 7.7e-32 140.6 118 61.9
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.0e-31 140.2 97 73.2
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.0e-31 140.2 83 79.5
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 1.0e-31 140.2 94 76.6
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.3e-31 139.8 116 60.3
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.3e-31 139.8 105 69.5
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.7e-31 139.4 98 73.5
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.7e-31 139.4 98 73.5
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.7e-31 139.4 98 73.5
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.7e-31 139.4 117 65.0
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 1.7e-31 139.4 89 74.2
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 2.9e-31 138.7 112 61.6
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.9e-31 138.7 116 62.9
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 5.0e-31 137.9 94 75.5
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 5.0e-31 137.9 94 75.5
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 5.0e-31 137.9 96 69.8
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 5.0e-31 137.9 116 62.9
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 6.5e-31 137.5 94 75.5
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 6.5e-31 137.5 78 85.9
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 8.5e-31 137.1 118 62.7
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 8.5e-31 137.1 118 62.7
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 8.5e-31 137.1 118 62.7
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 8.5e-31 137.1 118 63.6
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.5e-30 136.3 78 84.6
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.9e-30 136.0 94 74.5
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.9e-30 136.0 117 62.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 1.9e-30 136.0 95 73.7
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 2.5e-30 135.6 126 60.3
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 3.2e-30 135.2 78 79.5
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 3.2e-30 135.2 98 71.4
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 4.2e-30 134.8 78 83.3
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.5e-30 134.4 86 77.9
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 7.2e-30 134.0 103 67.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.2e-29 133.3 78 80.8
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.2e-29 133.3 90 75.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-29 133.3 116 61.2
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.6e-29 132.9 116 62.1
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.6e-29 132.9 78 80.8
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.6e-29 132.9 79 82.3
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.6e-29 132.9 74 86.5
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 3.6e-29 131.7 127 59.1
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 6.1e-29 131.0 95 70.5
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 8.0e-29 130.6 79 79.7
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.8e-28 129.4 116 57.8
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.3e-28 129.0 78 82.1
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 3.0e-28 128.6 78 76.9
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 5.2e-28 127.9 73 86.3
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 5.2e-28 127.9 80 78.8
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 8.8e-28 127.1 99 60.6
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.5e-27 126.3 116 62.1
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.5e-27 126.3 85 76.5
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 9.7e-27 123.6 111 62.2
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 1.3e-26 123.2 69 78.3
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.7e-26 122.9 119 57.1
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 2.8e-26 122.1 85 70.6
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 8.2e-26 120.6 118 58.5
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 3.1e-25 118.6 159 44.0
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 1.2e-24 116.7 88 68.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 8.5e-23 110.5 78 70.5
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 1.9e-22 109.4 71 70.4
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 4.2e-22 108.2 72 75.0
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 7.2e-22 107.5 70 68.6
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.4e-19 98.2 49 93.9
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.7e-18 96.3 48 89.6
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 5.9e-16 87.8 58 70.7
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.9e-15 85.5 84 51.2
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 5.0e-15 84.7 70 57.1
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 7.0e-09 64.3 69 46.4


User provided reference genes

Program Settings