Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018719 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-27 124.8 65 100.0
PGSC0003DMG400002982 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-21 105.9 63 87.3
PGSC0003DMG400018694 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.6e-21 104.8 63 87.3
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.4e-21 104.4 63 84.1
CAN.G1632.1 Capsicum annuum HOM05D000009 ORTHO05D000008 5.8e-21 103.6 63 82.5
Sopen08g003600 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-20 102.1 63 84.1
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-20 102.1 63 84.1
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-20 102.1 63 84.1
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 2.9e-20 101.3 63 79.4
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.8e-20 100.9 63 82.5
PGSC0003DMG400018574 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.8e-20 100.9 66 81.8
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.5e-20 100.1 63 82.5
Sopen11g028680 Solanum pennellii HOM05D000009 ORTHO05D000008 8.4e-20 99.8 66 81.8
Solyc11g069990.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.1e-19 99.4 66 81.8
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 1.1e-19 99.4 63 82.5
CAN.G309.9 Capsicum annuum HOM05D000009 ORTHO05D000008 1.4e-19 99.0 63 76.2
CAN.G631.61 Capsicum annuum HOM05D000009 ORTHO05D000008 1.4e-19 99.0 63 79.4
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 1.4e-19 99.0 66 80.3
PGSC0003DMG400018572 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.4e-19 99.0 66 80.3
Sopen11g027080 Solanum pennellii HOM05D000009 ORTHO05D000008 3.2e-19 97.8 63 77.8
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 4.2e-19 97.4 66 78.8
Sopen11g028600 Solanum pennellii HOM05D000009 ORTHO05D000008 4.2e-19 97.4 66 78.8
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.2e-19 97.4 66 78.8
CAN.G1887.5 Capsicum annuum HOM05D000009 ORTHO05D000008 7.1e-19 96.7 61 78.7
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.1e-19 96.7 66 77.3
CAN.G631.56 Capsicum annuum HOM05D000009 ORTHO05D000008 9.3e-19 96.3 63 79.4
CAN.G742.14 Capsicum annuum HOM05D000009 ORTHO05D000008 9.3e-19 96.3 63 77.8
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 9.3e-19 96.3 63 81.0
CAN.G309.39 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-18 95.9 61 82.0
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-18 95.9 61 82.0
CAN.G309.42 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-18 95.9 61 82.0
CAN.G309.44 Capsicum annuum HOM05D000009 ORTHO05D000008 1.6e-18 95.5 61 83.6
PGSC0003DMG400018570 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-18 95.1 66 74.2
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.7e-18 94.7 61 80.3
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-18 94.4 65 78.5
CAN.G309.36 Capsicum annuum HOM05D000009 ORTHO05D000008 4.6e-18 94.0 65 76.9
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 6.0e-18 93.6 66 77.3
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.0e-17 92.8 63 73.0
CAN.G1848.1 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-17 92.4 63 76.2
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.3e-17 92.4 51 92.2
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-17 92.0 66 77.3
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-17 92.0 64 78.1
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.0e-17 91.3 66 75.8
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.0e-17 91.3 66 77.3
CAN.G1887.11 Capsicum annuum HOM05D000009 ORTHO05D000008 6.7e-17 90.1 61 80.3
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 8.7e-17 89.7 61 80.3
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-16 89.4 66 74.2
PGSC0003DMG401030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.1e-16 89.4 63 71.4
PGSC0003DMG400040620 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.5e-16 89.0 61 80.3
CAN.G309.28 Capsicum annuum HOM05D000009 ORTHO05D000008 1.9e-16 88.6 65 75.4
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 1.9e-16 88.6 66 74.2
Sopen09g016280 Solanum pennellii HOM05D000009 ORTHO05D000008 1.9e-16 88.6 63 69.8
PGSC0003DMG400025383 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-16 88.2 65 70.8
CAN.G1358.3 Capsicum annuum HOM05D000009 ORTHO05D000008 3.3e-16 87.8 66 72.7
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.3e-16 87.8 66 74.2
CAN.G963.11 Capsicum annuum HOM05D000009 ORTHO05D000008 4.3e-16 87.4 65 73.8
CAN.G1149.7 Capsicum annuum HOM05D000009 ORTHO05D000008 5.7e-16 87.0 66 72.7
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 5.7e-16 87.0 66 74.2
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.4e-16 86.7 66 71.2
PGSC0003DMG400030239 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.6e-16 86.3 63 71.4
CAN.G1887.2 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-15 85.9 63 74.6
PGSC0003DMG400030238 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.3e-15 85.9 63 73.0
CAN.G309.34 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-15 85.1 66 71.2
PGSC0003DMG402030236 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.1e-15 85.1 65 70.8
CAN.G426.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-15 84.7 64 73.4
Solyc11g043070.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.8e-15 84.7 66 71.2
PGSC0003DMG402030235 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.8e-15 84.7 61 73.8
CAN.G1524.14 Capsicum annuum HOM05D000009 ORTHO05D000008 3.7e-15 84.3 64 73.4
CAN.G309.33 Capsicum annuum HOM05D000009 ORTHO05D000008 4.8e-15 84.0 66 69.7
CAN.G1218.19 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-15 83.6 64 70.3
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-15 83.6 66 71.2
CAN.G1887.7 Capsicum annuum HOM05D000009 ORTHO05D000008 8.2e-15 83.2 62 74.2
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.2e-15 83.2 66 68.2
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.2e-15 83.2 66 68.2
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-14 82.0 65 66.2
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.4e-14 81.6 66 63.6
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.4e-14 81.6 66 66.7
PGSC0003DMG400027409 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.1e-14 81.3 63 68.3
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 4.1e-14 80.9 66 62.1
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 4.1e-14 80.9 66 62.1
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.3e-14 80.5 64 67.2
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.3e-14 80.5 66 65.2
CAN.G3750.1 Capsicum annuum HOM05D000009 ORTHO05D000008 9.0e-14 79.7 85 58.8
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 9.0e-14 79.7 66 66.7
CAN.G1632.10 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-13 79.3 61 68.9
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.2e-13 79.3 64 65.6
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.5e-13 79.0 66 63.6
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.5e-13 79.0 64 67.2
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 2.0e-13 78.6 64 65.6
Solyc11g072350.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.6e-13 78.2 66 65.2
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.4e-13 77.8 64 68.8
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-13 77.8 65 63.1
Peaxi162Scf03295g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 3.4e-13 77.8 64 64.1
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.9e-13 77.0 65 63.1
Sopen11g029090 Solanum pennellii HOM05D000009 ORTHO05D000008 5.9e-13 77.0 48 79.2
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 7.6e-13 76.6 64 62.5
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-12 76.3 66 62.1
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 1.7e-12 75.5 66 63.6
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.2e-12 75.1 66 62.1
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-12 74.3 63 65.1
Nitab4.5_0009634g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-12 74.3 66 60.6
Nitab4.5_0010845g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.0e-12 73.9 64 60.9
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 6.5e-12 73.6 64 60.9
Nitab4.5_0000023g0560 Nicotiana tabacum HOM05D000009 ORTHO05D000008 8.4e-12 73.2 66 62.1
Nitab4.5_0005589g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-11 72.8 66 60.6
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 4.2e-11 70.9 67 59.7
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 4.2e-11 70.9 67 59.7
Peaxi162Scf01048g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 5.5e-11 70.5 64 59.4
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.2e-11 70.1 65 60.0
Nitab4.5_0004261g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-10 68.9 65 56.9
CAN.G742.21 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-10 68.2 44 79.5
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.1e-10 67.0 64 59.4
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 1.0e-09 66.2 66 53.0
CAN.G1887.9 Capsicum annuum HOM05D000009 ORTHO05D000008 3.9e-09 64.3 50 70.0
Solyc03g078300.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.7e-09 63.5 66 50.0
Sopen03g021050 Solanum pennellii HOM05D000009 ORTHO05D000008 6.7e-09 63.5 66 50.0
PGSC0003DMG400013721 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-08 61.6 66 48.5
Peaxi162Scf00857g00010 Petunia axillaris HOM05D000009 ORTHO05D000008 1.3e-07 59.3 63 55.6
Nitab4.5_0015060g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.7e-07 57.8 39 66.7
Solyc11g043030.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.3e-07 57.0 46 67.4
CAN.G71.19 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-06 55.1 39 64.1
PGSC0003DMG401027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.3e-06 53.9 32 84.4
PGSC0003DMG402027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.3e-06 53.9 32 84.4
Peaxi162Scf10492g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 6.9e-06 53.5 40 62.5
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.9e-06 53.5 30 90.0
CAN.G963.9 Capsicum annuum HOM05D000009 ORTHO05D000008 9.0e-06 53.1 41 68.3


User provided reference genes

Program Settings