Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 2.6e-269 931.4 443 100.0
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.8e-251 872.1 443 93.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.0e-250 868.6 443 93.2
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 9.6e-208 726.9 465 77.2
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 4.0e-206 721.5 447 79.4
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 8.7e-193 677.2 447 75.2
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-190 670.2 397 80.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 5.5e-163 578.2 473 61.5
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 4.5e-157 558.5 479 59.9
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.3e-153 546.2 426 63.6
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 5.7e-152 541.6 451 60.5
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 4.5e-149 531.9 432 61.1
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 6.5e-148 528.1 421 63.2
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.5e-147 526.9 475 57.3
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 2.5e-147 526.2 470 57.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.7e-146 522.7 430 60.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 4.0e-145 518.8 464 56.7
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-144 517.3 471 57.1
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-142 510.8 467 57.4
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 5.4e-142 508.4 430 58.4
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.0e-141 506.5 455 58.5
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.7e-141 506.1 466 57.3
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.5e-141 505.8 474 55.7
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 4.5e-141 505.4 393 62.1
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 4.5e-141 505.4 479 54.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.9e-141 505.0 369 66.1
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.3e-140 503.8 457 55.4
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.7e-140 503.4 450 57.3
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.3e-140 503.1 485 54.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 3.8e-140 502.3 470 55.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.0e-140 501.9 466 56.2
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 8.6e-140 501.1 494 53.4
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 8.6e-140 501.1 468 54.9
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.1e-139 500.7 478 54.4
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 4.2e-139 498.8 472 54.9
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.8e-138 496.1 384 62.2
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.4e-137 493.8 436 56.0
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.4e-137 493.8 443 56.0
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 6.8e-137 491.5 485 52.8
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 8.9e-137 491.1 377 62.9
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 4.4e-136 488.8 478 54.4
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.3e-135 487.3 448 56.9
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.7e-135 485.7 418 58.6
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 4.9e-135 485.3 423 56.5
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.3e-135 485.0 472 53.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.8e-134 483.4 372 63.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.4e-134 481.9 417 57.3
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.4e-134 481.9 417 57.3
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 9.2e-134 481.1 377 61.3
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 7.8e-133 478.0 429 55.9
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.7e-132 476.9 427 56.7
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 2.3e-132 476.5 387 59.7
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.9e-132 475.7 389 59.9
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 8.6e-132 474.6 433 55.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.1e-131 474.2 418 56.7
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.1e-131 474.2 393 58.5
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.1e-131 474.2 375 61.3
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 5.6e-131 471.9 443 54.9
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 7.3e-131 471.5 436 55.5
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.6e-130 470.3 394 58.9
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 4.7e-130 468.8 383 59.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-129 467.2 429 55.2
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.8e-129 466.8 434 55.1
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.8e-129 466.8 418 55.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 4.0e-129 465.7 383 58.2
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 5.2e-129 465.3 429 55.2
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.2e-128 464.2 433 55.7
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.2e-128 464.2 412 57.3
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-128 463.8 414 56.5
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.6e-128 463.0 387 57.6
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 5.8e-128 461.8 377 59.4
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.3e-127 460.7 452 52.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.3e-127 460.7 456 54.2
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.9e-127 458.8 425 54.1
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.4e-127 458.4 422 55.9
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 8.3e-127 458.0 425 54.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 2.4e-126 456.4 379 57.8
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 9.2e-126 454.5 457 52.1
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.6e-125 453.8 401 58.4
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.6e-125 453.8 376 57.2
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.6e-125 453.8 376 57.2
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.6e-125 453.8 376 57.2
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 4.6e-125 452.2 369 59.3
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 2.3e-124 449.9 378 57.4
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 3.0e-124 449.5 429 54.3
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 3.0e-124 449.5 409 54.8
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.1e-123 447.6 434 53.7
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.3e-123 446.0 455 51.0
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.6e-122 443.7 412 53.6
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.7e-122 442.2 455 50.8
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.8e-121 440.3 456 50.7
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.2e-121 438.7 455 50.5
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 2.0e-120 436.8 462 50.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.2e-119 433.3 362 58.6
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.6e-117 427.2 358 58.1
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.3e-116 423.3 411 48.9
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.4e-112 409.5 365 54.8
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.6e-107 391.3 413 48.7
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.9e-102 377.1 422 46.4
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 6.4e-87 325.5 328 54.6
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-80 304.7 454 42.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.2e-80 304.7 345 47.0
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.2e-80 304.7 337 46.9
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.9e-79 300.1 213 66.2
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.0e-77 292.4 249 58.6
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 6.0e-77 292.4 296 53.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 3.8e-63 246.5 388 37.4
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.0e-55 221.9 478 33.7
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.2e-55 220.7 391 35.3
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.5e-51 208.0 300 41.0
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 3.5e-40 170.2 199 51.3
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.3e-34 149.4 379 33.2
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 4.1e-33 146.7 113 63.7
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.9e-30 137.9 165 49.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.8e-28 129.4 365 31.2
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.2e-27 128.6 481 28.3
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.0e-25 119.4 320 32.2
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 6.6e-23 112.8 262 34.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.1e-22 112.1 132 44.7
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 2.8e-21 107.5 64 71.9
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.9e-06 58.2 41 58.5


User provided reference genes

Program Settings