Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 2.3e-215 751.9 362 100.0
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 5.8e-203 710.7 364 94.8
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 4.5e-187 657.9 360 87.8
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.1e-174 616.7 363 82.6
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 4.4e-158 561.6 281 95.7
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.6e-152 542.0 358 76.5
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 5.3e-148 528.1 348 76.1
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 2.5e-145 519.2 348 71.3
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.2e-142 510.4 349 69.6
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.2e-142 510.4 357 68.6
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.1e-140 502.3 353 67.4
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 3.1e-140 502.3 354 67.8
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 4.1e-140 501.9 361 64.8
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 3.5e-139 498.8 357 66.7
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 4.5e-139 498.4 346 68.5
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 2.9e-138 495.7 356 67.7
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.5e-138 494.6 332 70.5
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 8.5e-138 494.2 357 67.2
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 1.1e-137 493.8 391 61.9
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.2e-136 490.3 364 63.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.8e-136 489.2 332 69.9
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 3.6e-136 488.8 352 65.3
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.7e-136 488.4 354 67.8
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.3e-135 486.1 370 65.4
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 4.0e-135 485.3 358 66.2
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 6.8e-135 484.6 350 65.7
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 6.8e-135 484.6 332 69.0
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.5e-134 483.4 350 65.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 2.6e-134 482.6 355 66.5
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 2.6e-134 482.6 341 66.6
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 3.4e-134 482.3 331 67.1
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 7.5e-134 481.1 331 68.9
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 7.5e-134 481.1 350 65.1
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 9.8e-134 480.7 352 65.6
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 2.8e-133 479.2 354 65.0
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 2.8e-133 479.2 367 63.5
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 4.9e-133 478.4 342 66.1
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 4.9e-133 478.4 348 65.2
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 6.3e-133 478.0 330 66.4
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 6.3e-133 478.0 361 63.2
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-132 477.2 350 66.9
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.4e-132 476.1 326 68.4
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.4e-132 476.1 346 64.5
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 7.0e-132 474.6 342 67.5
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 4.5e-131 471.9 329 69.0
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 5.9e-131 471.5 349 64.8
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 1.0e-130 470.7 356 64.9
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.9e-130 469.2 342 65.2
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 5.0e-130 468.4 352 60.5
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.5e-129 466.1 329 67.8
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 2.8e-128 462.6 383 59.8
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 8.0e-128 461.1 333 65.8
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 5.2e-127 458.4 333 66.7
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 5.2e-127 458.4 355 60.6
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 6.8e-127 458.0 331 64.4
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 5.7e-126 454.9 329 66.0
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 5.7e-126 454.9 329 65.7
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 8.3e-125 451.1 395 57.0
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 9.2e-124 447.6 353 61.2
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.1e-120 436.4 329 62.3
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.0e-119 434.1 340 61.8
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.1e-119 432.6 350 60.0
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.1e-119 432.6 350 60.0
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 4.0e-119 432.2 335 61.5
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 5.2e-119 431.8 330 59.4
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 5.2e-119 431.8 340 60.9
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 6.8e-119 431.4 335 60.3
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 8.9e-119 431.0 343 60.1
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 8.9e-119 431.0 356 59.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.0e-118 429.9 331 61.0
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.6e-118 429.5 346 60.1
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 4.4e-118 428.7 330 62.1
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 5.8e-118 428.3 420 52.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 7.5e-118 427.9 331 60.4
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.3e-117 427.2 353 59.2
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.7e-117 426.8 350 59.1
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 2.2e-117 426.4 331 61.9
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 3.7e-117 425.6 350 58.9
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 3.0e-114 416.0 348 57.5
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 6.8e-111 404.8 350 58.0
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 9.9e-110 401.0 350 57.7
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 1.4e-108 397.1 352 57.1
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.2e-108 396.0 287 65.5
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 9.2e-108 394.4 280 67.1
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 3.6e-104 382.5 514 44.2
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 3.6e-104 382.5 306 61.4
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 6.2e-104 381.7 351 54.7
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 8.4e-101 371.3 262 64.9
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 3.2e-100 369.4 332 56.6
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.2e-99 367.5 242 69.0
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 7.3e-97 358.2 263 66.5
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 3.8e-93 345.9 337 53.4
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 6.4e-93 345.1 233 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 4.5e-86 322.4 340 46.8
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.2e-83 314.3 395 47.1
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.7e-82 308.5 343 48.7
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 8.7e-82 308.1 321 48.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.1e-79 299.7 262 57.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 2.5e-73 280.0 174 71.8
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 1.4e-71 274.2 196 64.8
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.5e-70 270.8 276 47.5
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.4e-55 220.3 330 39.4
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.8e-37 159.8 168 49.4
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 2.2e-32 144.1 101 66.3
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.9e-28 131.0 101 61.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.7e-27 126.3 78 74.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.2e-18 96.3 69 71.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 2.0e-14 84.3 97 44.3
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.1e-12 78.6 63 58.7
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.1e-12 78.6 50 68.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.5e-12 78.2 53 71.7
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.6e-09 67.4 38 76.3


User provided reference genes

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