Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 2.1e-30 135.2 76 100.0
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 4.1e-26 120.9 76 89.5
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.0e-25 118.6 76 88.2
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 6.4e-19 97.1 76 75.0
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 4.6e-17 90.9 76 69.7
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 3.0e-16 88.2 76 67.1
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 4.0e-13 77.8 77 59.7
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 5.2e-13 77.4 79 63.3
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 5.8e-12 73.9 77 57.1
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 1.1e-10 69.7 76 60.5
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 5.4e-10 67.4 77 58.4
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.6e-09 65.9 76 60.5
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.7e-09 65.1 76 51.3
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 3.5e-09 64.7 76 51.3
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 3.5e-09 64.7 79 55.7
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 4.6e-09 64.3 76 52.6
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 6.0e-09 63.9 76 51.3
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 7.8e-09 63.5 79 54.4
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 2.3e-08 62.0 76 51.3
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 2.3e-08 62.0 76 53.9
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 3.0e-08 61.6 81 50.6
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 3.9e-08 61.2 79 54.4
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 6.6e-08 60.5 80 48.8
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 6.6e-08 60.5 75 56.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 6.6e-08 60.5 75 56.0
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 8.7e-08 60.1 76 51.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.1e-07 59.7 76 48.7
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 1.9e-07 58.9 81 49.4
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 1.9e-07 58.9 81 49.4
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.5e-07 58.5 81 49.4
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 2.5e-07 58.5 76 50.0
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 2.5e-07 58.5 76 51.3
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 3.3e-07 58.2 78 52.6
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 4.3e-07 57.8 77 49.4
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 4.3e-07 57.8 76 52.6
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 5.6e-07 57.4 80 50.0
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 7.3e-07 57.0 80 46.2
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 7.3e-07 57.0 76 46.1
Gorai.005G201700 Gossypium raimondii HOM05D025024 ORTHO05D004056 7.3e-07 57.0 76 50.0
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 7.3e-07 57.0 77 57.1
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 9.6e-07 56.6 80 45.0
Gohir.D02G180001 Gossypium hirsutum HOM05D025024 ORTHO05D004056 9.6e-07 56.6 76 50.0
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 1.2e-06 56.2 80 47.5
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.2e-06 56.2 80 52.5
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 1.6e-06 55.8 82 48.8
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 1.6e-06 55.8 76 48.7
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.6e-06 55.8 76 47.4
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 1.6e-06 55.8 80 50.0
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.6e-06 55.8 79 48.1
Gohir.A03G156801 Gossypium hirsutum HOM05D025024 ORTHO05D004056 2.1e-06 55.5 76 50.0
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 2.8e-06 55.1 74 51.4
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 2.8e-06 55.1 81 45.7
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 2.8e-06 55.1 83 49.4
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 2.8e-06 55.1 88 47.7
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.8e-06 55.1 76 52.6
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 2.8e-06 55.1 77 48.1
PSO675G7471 Papaver somniferum HOM05D005953 ORTHO05D004056 2.8e-06 55.1 45 57.8
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 2.8e-06 55.1 76 46.1
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 3.6e-06 54.7 76 52.6
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 3.6e-06 54.7 76 52.6
Nitab4.5_0011699g0010 Nicotiana tabacum HOM05D051074 ORTHO05D004056 3.6e-06 54.7 31 83.9
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 3.6e-06 54.7 75 48.0
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 4.7e-06 54.3 77 50.6
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 4.7e-06 54.3 79 50.6
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 4.7e-06 54.3 83 44.6
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 6.2e-06 53.9 80 48.8
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 6.2e-06 53.9 76 48.7
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 6.2e-06 53.9 78 50.0
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 6.2e-06 53.9 83 48.2
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 8.1e-06 53.5 83 47.0
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 8.1e-06 53.5 83 47.0
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 8.1e-06 53.5 83 47.0
Cpa.g.sc34.158 Carica papaya HOM05D005953 ORTHO05D043536 8.1e-06 53.5 28 89.3
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 8.1e-06 53.5 76 46.1
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 8.1e-06 53.5 76 52.6
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 8.1e-06 53.5 76 48.7


User provided reference genes

Program Settings