Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.1e-57 226.9 159 100.0
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 3.2e-52 208.8 160 70.6
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 3.5e-51 205.3 160 70.0
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.7e-21 106.7 98 56.1
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 6.6e-18 94.7 54 83.3
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.5e-17 93.6 99 59.6
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.5e-17 93.6 99 59.6
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 9.6e-17 90.9 105 49.5
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.4e-15 86.3 106 43.4
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 5.3e-15 85.1 102 49.0
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 5.3e-15 85.1 96 52.1
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 5.3e-15 85.1 95 47.4
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 9.0e-15 84.3 99 46.5
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 2.6e-14 82.8 95 50.5
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 2.6e-14 82.8 104 41.3
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 3.4e-14 82.4 51 70.6
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 4.4e-14 82.0 107 42.1
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 7.6e-14 81.3 60 58.3
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 2.9e-13 79.3 51 66.7
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 2.9e-13 79.3 95 44.2
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.1e-12 77.4 98 45.9
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.1e-12 77.4 101 40.6
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 1.9e-12 76.6 103 40.8
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.4e-12 76.3 98 44.9
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 7.1e-12 74.7 56 57.1
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 1.2e-11 73.9 98 43.9
Peaxi162Scf00071g00119 Petunia axillaris HOM05D008155 ORTHO05D050235 1.2e-11 73.9 80 53.8
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 1.2e-11 73.9 51 62.7
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 1.6e-11 73.6 52 57.7
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 1.6e-11 73.6 99 45.5
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 2.1e-11 73.2 46 67.4
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 6.0e-11 71.6 103 38.8
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 6.0e-11 71.6 46 65.2
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 7.9e-11 71.2 51 58.8
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 1.7e-10 70.1 76 46.1
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 1.7e-10 70.1 53 54.7
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 1.7e-10 70.1 105 41.9
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 3.0e-10 69.3 98 39.8
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 6.6e-10 68.2 118 43.2
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 1.5e-09 67.0 109 40.4
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 1.9e-09 66.6 108 37.0
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 1.9e-09 66.6 115 40.0
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.9e-09 66.6 54 55.6
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.9e-09 66.6 52 57.7
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 4.3e-09 65.5 51 58.8
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 4.3e-09 65.5 98 43.9
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 4.3e-09 65.5 101 42.6
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 4.3e-09 65.5 51 51.0
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 1.6e-08 63.5 51 51.0
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 2.1e-08 63.2 51 56.9
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 2.8e-08 62.8 53 49.1
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 3.6e-08 62.4 108 38.0
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 4.8e-08 62.0 48 58.3
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 6.2e-08 61.6 105 34.3
Lsat_1_v5_gn_1_75801 Lactuca sativa HOM05D008155 ORTHO05D010411 1.4e-07 60.5 50 56.0
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 1.8e-07 60.1 94 37.2
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 4.0e-07 58.9 50 54.0
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 6.9e-07 58.2 94 37.2
Thhalv10005106m.g Eutrema salsugineum HOM05D008255 ORTHO05D011943 6.9e-07 58.2 44 59.1
Sp2g21360 Schrenkiella parvula HOM05D008255 ORTHO05D011943 6.9e-07 58.2 50 54.0
BcaNung03958 Brassica carinata HOM05D008255 ORTHO05D011943 1.5e-06 57.0 44 56.8
unitig_747.g21289 Utricularia gibba HOM05D008155 ORTHO05D010411 2.0e-06 56.6 48 52.1
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 3.4e-06 55.8 35 68.6
BcaNung02826 Brassica carinata HOM05D008255 ORTHO05D011943 9.9e-06 54.3 33 69.7
BcaNung03956 Brassica carinata HOM05D008255 ORTHO05D011943 9.9e-06 54.3 33 69.7
BolC7t44700H Brassica oleracea HOM05D008255 ORTHO05D011943 9.9e-06 54.3 33 69.7
BraA06t26610Z Brassica rapa HOM05D008255 ORTHO05D011943 9.9e-06 54.3 33 69.7
CARHR186950 Cardamine hirsuta HOM05D008255 ORTHO05D011943 9.9e-06 54.3 52 50.0


User provided reference genes

Program Settings