Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 1.8e-84 315.8 157 100.0
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 6.4e-82 307.4 157 96.8
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 7.1e-81 303.9 157 96.2
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 2.3e-71 272.3 156 87.2
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 2.6e-59 232.3 150 76.7
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 6.3e-53 211.1 155 71.6
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 5.1e-47 191.4 138 70.3
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 4.8e-45 184.9 147 63.9
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.4e-44 183.3 147 63.9
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.8e-44 183.0 141 67.4
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 4.1e-44 181.8 147 63.9
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 4.5e-43 178.3 147 63.3
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 1.1e-41 173.7 142 65.5
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 3.2e-41 172.2 149 62.4
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 7.2e-41 171.0 147 61.2
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.2e-40 170.2 139 61.9
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.7e-40 169.1 141 63.1
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.7e-40 169.1 141 63.1
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.6e-40 168.7 139 64.0
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.6e-40 168.7 147 60.5
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 3.6e-40 168.7 141 63.8
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 1.4e-39 166.8 141 64.5
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 1.4e-39 166.8 141 64.5
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 1.4e-39 166.8 143 61.5
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 1.4e-39 166.8 150 56.7
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.8e-39 166.4 146 58.2
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.8e-39 166.4 145 60.7
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 3.0e-39 165.6 142 63.4
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 3.0e-39 165.6 142 57.7
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 3.9e-39 165.2 142 62.7
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 3.9e-39 165.2 141 62.4
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 5.2e-39 164.9 147 58.5
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 6.7e-39 164.5 148 61.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 8.8e-39 164.1 145 62.1
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 1.1e-38 163.7 149 57.0
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.5e-38 163.3 139 61.9
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 3.3e-38 162.2 157 54.1
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 4.4e-38 161.8 147 61.2
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 4.4e-38 161.8 150 60.7
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 9.7e-38 160.6 145 59.3
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.3e-37 160.2 147 60.5
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 2.8e-37 159.1 142 59.9
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 2.8e-37 159.1 141 63.1
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 8.2e-37 157.5 146 58.9
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 1.1e-36 157.1 148 58.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.4e-36 156.8 145 58.6
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 4.1e-36 155.2 146 58.2
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.1e-36 155.2 158 53.8
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 5.3e-36 154.8 147 57.1
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 5.3e-36 154.8 144 58.3
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 7.0e-36 154.5 149 54.4
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.2e-35 153.7 143 58.0
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.6e-35 153.3 148 56.1
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 1.6e-35 153.3 140 55.7
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.0e-35 152.9 158 53.8
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.0e-35 152.9 148 54.7
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 2.6e-35 152.5 144 55.6
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 3.5e-35 152.1 127 61.4
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.5e-35 151.8 153 54.2
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 4.5e-35 151.8 148 55.4
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 4.5e-35 151.8 144 59.0
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 4.5e-35 151.8 142 57.0
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 1.0e-34 150.6 142 56.3
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 5.0e-34 148.3 142 54.9
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.0e-34 148.3 127 62.2
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 6.5e-34 147.9 142 53.5
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 6.5e-34 147.9 137 59.9
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 8.5e-34 147.5 142 54.9
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 8.5e-34 147.5 166 50.6
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 2.5e-33 146.0 142 54.2
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 2.5e-33 146.0 142 54.2
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 2.5e-33 146.0 142 54.2
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 2.5e-33 146.0 142 54.2
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 2.5e-33 146.0 142 56.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.2e-33 145.6 142 54.2
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.2e-33 145.6 142 54.2
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.2e-33 145.6 142 54.2
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.6e-32 143.3 143 54.5
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 3.6e-32 142.1 172 48.3
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.4e-31 140.2 147 49.7
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 1.4e-31 140.2 149 50.3
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.8e-31 139.8 136 58.8
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 1.2e-30 137.1 91 73.6
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.2e-30 137.1 172 45.3
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 5.7e-30 134.8 136 52.2
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 9.7e-30 134.0 141 55.3
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 6.3e-29 131.3 145 52.4
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 6.3e-29 131.3 104 66.3
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.1e-28 130.6 71 85.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.8e-28 129.8 137 52.6
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 3.1e-28 129.0 91 68.1
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.1e-28 129.0 200 41.5
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 7.0e-28 127.9 129 55.0
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.0e-26 124.0 77 77.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.0e-26 124.0 71 77.5
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.7e-26 123.2 77 76.6
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.7e-26 123.2 118 56.8
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.9e-26 122.5 118 55.9
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 8.5e-26 120.9 101 62.4
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-25 120.6 70 78.6
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 1.5e-25 120.2 105 60.0
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 3.2e-25 119.0 72 76.4
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 2.1e-24 116.3 176 43.8
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 3.0e-23 112.5 143 49.0
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 6.8e-23 111.3 179 41.9
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 2.6e-22 109.4 71 60.6
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 5.7e-22 108.2 74 68.9
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.8e-20 103.2 82 59.8
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 7.0e-20 101.3 152 38.8
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 9.1e-20 100.9 144 44.4
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 2.7e-19 99.4 151 36.4
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 4.7e-16 88.6 185 30.3
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.0e-15 85.9 148 36.5
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 6.8e-15 84.7 54 72.2
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.2e-13 79.7 56 64.3
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 7.0e-12 74.7 113 42.5
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 1.0e-10 70.9 141 36.9
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 8.6e-10 67.8 68 44.1
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 8.0e-08 61.2 69 43.5
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 4.4e-06 55.5 74 35.1
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 7.5e-06 54.7 76 34.2


User provided reference genes

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