Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018160 Solanum tuberosum HOM05D003532 ORTHO05D003298 1.4e-254 882.5 455 100.0
CAN.G1166.12 Capsicum annuum HOM05D003532 ORTHO05D003298 2.6e-248 861.7 455 94.5
Sopen03g031830 Solanum pennellii HOM05D003532 ORTHO05D003298 5.7e-248 860.5 455 95.4
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 7.5e-248 860.1 455 95.4
Nitab4.5_0003218g0080 Nicotiana tabacum HOM05D003532 ORTHO05D003298 5.4e-238 827.4 455 90.1
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 8.5e-236 820.1 455 89.5
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 3.2e-235 818.1 455 91.0
Cc05_g14600 Coffea canephora HOM05D003532 ORTHO05D003298 2.6e-200 702.2 453 74.4
Cfa020236 Carpinus fangiana HOM05D003532 ORTHO05D003298 6.4e-199 697.6 457 77.2
Oeu019616.1 Olea europaea HOM05D003532 ORTHO05D003298 1.4e-198 696.4 453 75.5
Rhsim06G0226200 Rhododendron simsii HOM05D003532 ORTHO05D003298 7.1e-198 694.1 455 74.3
vmacro11564 Vaccinium macrocarpon HOM05D003532 ORTHO05D003298 1.2e-197 693.3 455 75.4
Dinv10304 Davidia involucrata HOM05D003532 ORTHO05D003298 1.6e-197 693.0 459 76.5
Prupe.4G231800 Prunus persica HOM05D003532 ORTHO05D003298 1.6e-197 693.0 461 77.2
CiPaw.11G200200 Carya illinoinensis HOM05D003532 ORTHO05D003298 2.3e-196 689.1 461 74.6
Thecc.07G023400 Theobroma cacao HOM05D003532 ORTHO05D003298 5.1e-196 688.0 458 75.3
COL.COLO4_09777 Corchorus olitorius HOM05D003532 ORTHO05D003298 3.3e-195 685.3 459 73.0
Duzib213G0377 Durio zibethinus HOM05D003532 ORTHO05D003298 1.2e-194 683.3 458 73.8
QL08p005936 Quercus lobata HOM05D003532 ORTHO05D003298 1.2e-194 683.3 457 75.7
Manes.15G064000 Manihot esculenta HOM05D003532 ORTHO05D003298 4.7e-194 681.4 462 75.1
Gohir.D01G072800 Gossypium hirsutum HOM05D003532 ORTHO05D003298 6.2e-194 681.0 458 74.7
TPR.G1921 Trifolium pratense HOM05D003532 ORTHO05D003298 6.2e-194 681.0 454 73.8
Gohir.A01G086600 Gossypium hirsutum HOM05D003532 ORTHO05D003298 1.8e-193 679.5 458 72.9
Gorai.002G095800 Gossypium raimondii HOM05D003532 ORTHO05D003298 1.8e-193 679.5 458 74.5
CSS0034495 Camellia sinensis var. sinensis HOM05D003532 ORTHO05D003298 4.0e-193 678.3 457 75.1
ECA240G1125 Erigeron canadensis HOM05D003532 ORTHO05D003298 6.9e-193 677.6 456 72.8
Aqoxy1G04019 Aquilegia oxysepala HOM05D003532 ORTHO05D003298 1.5e-192 676.4 465 73.5
Haze_09779 Corylus avellana HOM05D003532 ORTHO05D003298 1.5e-192 676.4 457 75.7
Psat5g171200 Pisum sativum HOM05D003532 ORTHO05D003298 4.4e-192 674.9 454 72.9
MD03G1189500 Malus domestica HOM05D003532 ORTHO05D003298 9.9e-192 673.7 460 75.2
arahy.Tifrunner.gnm1.ann1.5HZ9E9 Arachis hypogaea HOM05D003532 ORTHO05D003298 1.3e-191 673.3 456 73.9
Medtr3g055970 Medicago truncatula HOM05D003532 ORTHO05D003298 4.9e-191 671.4 454 72.9
PGR083G2272 Punica granatum HOM05D003532 ORTHO05D003298 8.4e-191 670.6 455 73.0
Glyma.08G325400 Glycine max HOM05D003532 ORTHO05D003298 1.1e-190 670.2 454 72.9
TWI39G0358 Tripterygium wilfordii HOM05D003532 ORTHO05D003298 1.4e-190 669.8 467 74.5
Eucgr.F00625 Eucalyptus grandis HOM05D003532 ORTHO05D003298 1.9e-190 669.5 455 72.5
Ca_16739_v3 Cicer arietinum L. HOM05D003532 ORTHO05D003298 2.4e-190 669.1 454 75.1
VMungo0540G1592 Vigna mungo HOM05D003532 ORTHO05D003298 5.4e-190 667.9 454 71.8
Lalb_Chr15g0081911 Lupinus albus HOM05D003532 ORTHO05D003298 3.5e-189 665.2 456 72.6
FAN25G2872 Fragaria x ananassa HOM05D003532 ORTHO05D003298 6.0e-189 664.5 463 72.6
Phvul.006G052900 Phaseolus vulgaris HOM05D003532 ORTHO05D003298 3.0e-188 662.1 453 71.3
Glyma.18G081800 Glycine max HOM05D003532 ORTHO05D003298 6.6e-188 661.0 454 71.4
Lj6g0018545 Lotus japonicus HOM05D003532 ORTHO05D003298 1.5e-187 659.8 454 72.2
ClCG09G021030 Citrullus lanatus HOM05D003532 ORTHO05D003298 2.5e-187 659.1 458 73.6
Cpa.g.sc12.202 Carica papaya HOM05D003532 ORTHO05D003298 4.3e-187 658.3 455 71.9
Lsat_1_v5_gn_0_15220 Lactuca sativa HOM05D003532 ORTHO05D003298 3.1e-185 652.1 453 73.1
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 9.0e-185 650.6 462 71.4
SalBow8G0547 Salvia bowleyana HOM05D003532 ORTHO05D003298 2.0e-184 649.4 462 72.1
Sed0014342 Sechium edule HOM05D003532 ORTHO05D003298 5.8e-184 647.9 458 69.9
Sc07g0002980 Simmondsia chinensis HOM05D003532 ORTHO05D003298 5.8e-184 647.9 456 69.7
RcHm_v2.0_Chr5g0042451 Rosa chinensis HOM05D003532 ORTHO05D003298 7.6e-184 647.5 466 70.4
TAR631G0007 Trochodendron aralioides HOM05D003532 ORTHO05D003298 9.9e-184 647.1 463 70.6
FAN11G2286 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.3e-183 646.7 463 70.8
Ciclev10007256m.g Citrus clementina HOM05D003532 ORTHO05D003298 4.9e-183 644.8 460 72.6
FvH4_3g23950 Fragaria vesca HOM05D003532 ORTHO05D003298 6.4e-183 644.4 463 70.6
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 1.9e-182 642.9 457 70.7
FAN21G0475 Fragaria x ananassa HOM05D003532 ORTHO05D003298 4.2e-182 641.7 463 70.2
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 4.2e-182 641.7 461 69.2
Ah.06g181150 Amaranthus hybridus HOM05D003532 ORTHO05D003298 9.3e-182 640.6 456 69.1
FAN16G2517 Fragaria x ananassa HOM05D003532 ORTHO05D003298 1.6e-181 639.8 463 70.0
Sabra16G0238200 Salix brachista HOM05D003532 ORTHO05D003298 2.7e-181 639.0 462 69.0
Hund23137 Selenicereus undatus HOM05D003532 ORTHO05D003298 2.3e-180 636.0 454 70.9
Atru.chr2.3624 Acer truncatum HOM05D003532 ORTHO05D003298 3.9e-180 635.2 459 71.5
FAN25G3696 Fragaria x ananassa HOM05D003532 ORTHO05D003298 3.9e-180 635.2 463 70.0
CANSAT11G0309 Cannabis sativa HOM05D003532 ORTHO05D003298 5.6e-179 631.3 460 70.7
MELO3C024898.2 Cucumis melo HOM05D003532 ORTHO05D003298 4.8e-178 628.2 458 71.0
Migut.M01683 Erythranthe guttata HOM05D003532 ORTHO05D003298 1.8e-177 626.3 457 70.7
DCAR_016632 Daucus carota HOM05D003532 ORTHO05D003298 2.4e-177 625.9 459 68.8
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 2.4e-177 625.9 453 70.2
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 4.0e-177 625.2 458 70.5
AT5G55540 Arabidopsis thaliana HOM05D003532 ORTHO05D003298 4.9e-175 618.2 457 67.8
AUR62015940 Chenopodium quinoa HOM05D003532 ORTHO05D003298 4.9e-175 618.2 455 66.2
AL8G31090 Arabidopsis lyrata HOM05D003532 ORTHO05D003298 8.4e-175 617.5 457 67.4
CARHR268860 Cardamine hirsuta HOM05D003532 ORTHO05D003298 9.3e-174 614.0 457 67.0
Carub.0008s1589 Capsella rubella HOM05D003532 ORTHO05D003298 3.5e-173 612.1 455 66.6
EL10Ac4g07624 Beta vulgaris HOM05D003532 ORTHO05D003298 3.1e-169 599.0 434 68.9
Sp6g17430 Schrenkiella parvula HOM05D003532 ORTHO05D003298 1.5e-168 596.7 457 65.9
BcaB08g35909 Brassica carinata HOM05D003532 ORTHO05D003298 1.7e-167 593.2 457 65.9
A10p12730 Brassica napus HOM05D003532 ORTHO05D003298 2.5e-166 589.3 457 66.3
BraA10t43365Z Brassica rapa HOM05D003532 ORTHO05D003298 2.5e-166 589.3 457 66.3
Thhalv10012444m.g Eutrema salsugineum HOM05D003532 ORTHO05D003298 9.3e-166 587.4 455 64.4
C09p46210 Brassica napus HOM05D003532 ORTHO05D003298 4.6e-165 585.1 457 66.3
BolC9t57486H Brassica oleracea HOM05D003532 ORTHO05D003298 6.0e-165 584.7 457 66.3
Actinidia00098 Actinidia chinensis HOM05D003532 ORTHO05D003298 4.2e-158 562.0 459 66.0
unitig_899.g15279 Utricularia gibba HOM05D003532 ORTHO05D003298 3.0e-156 555.8 456 61.4
SHI26496 Sapria himalayana HOM05D003532 ORTHO05D003298 3.2e-150 535.8 459 59.5
SGA_v2.0_scaffold171G38893 Striga asiatica HOM05D003532 ORTHO05D003298 2.0e-147 526.6 455 59.6
HPP92_012225 Vanilla planifolia HOM05D003532 ORTHO05D003298 9.4e-142 507.7 423 60.8
Lj1P884T43 Lonicera japonica HOM05D003532 ORTHO05D003298 2.7e-141 506.1 456 61.8
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 8.0e-141 504.6 461 55.5
Aa31LG3G11480 Aethionema arabicum HOM05D003532 ORTHO05D003298 3.5e-136 489.2 437 60.9
Zm00001eb057430 Zea mays HOM05D003532 ORTHO05D003298 5.2e-132 475.3 457 53.4
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 3.0e-116 422.9 367 60.5
AUR62040668 Chenopodium quinoa HOM05D003532 ORTHO05D003298 7.5e-107 391.7 288 66.7
GSVIVG01037769001 Vitis vinifera HOM05D003532 ORTHO05D003298 5.2e-92 342.4 455 45.7
Actinidia04774 Actinidia chinensis HOM05D003532 ORTHO05D003298 5.8e-83 312.4 460 42.2
MD11G1205800 Malus domestica HOM05D003532 ORTHO05D003298 7.4e-54 215.7 172 68.0
AUR62040669 Chenopodium quinoa HOM05D003532 ORTHO05D003298 6.9e-52 209.1 154 64.9
MD11G1205700 Malus domestica HOM05D003532 ORTHO05D003298 1.0e-42 178.7 149 65.1
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 7.2e-41 172.6 466 29.0
CDE04G0250 Ceratophyllum demersum HOM05D003532 ORTHO05D003298 1.4e-28 131.7 129 48.1
Pp3c3_24130 Physcomitrium patens HOM05D003532 ORTHO05D003298 3.5e-27 127.1 453 24.7
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 8.5e-26 122.5 456 26.5
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.2e-24 118.6 451 23.5
CBR_g38589 Chara braunii HOM05D003532 ORTHO05D003298 3.6e-24 117.1 454 22.9
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.7e-24 116.7 505 24.6
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.1e-22 112.1 491 25.1
CBR_g38594 Chara braunii HOM05D003532 ORTHO05D003298 4.4e-22 110.2 456 22.8
AagrBONN_evm.TU.Sc2ySwM_368.264 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.3e-21 108.6 503 23.7
CBR_g12185 Chara braunii HOM05D003532 ORTHO05D003298 1.7e-21 108.2 458 23.4
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 1.4e-20 105.1 450 22.9
AagrBONN_evm.TU.Sc2ySwM_368.274 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.1e-20 103.6 412 25.5
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 7.0e-20 102.8 454 23.1
CBR_g40030 Chara braunii HOM05D007859 ORTHO05D003298 2.0e-19 101.3 461 23.0
PGSC0003DMG401018159 Solanum tuberosum HOM05D003532 ORTHO05D003298 2.6e-19 100.9 58 87.9
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.2e-18 97.8 394 24.9
AagrBONN_evm.TU.Sc2ySwM_362.1324 Anthoceros agrestis HOM05D002844 ORTHO05D003298 8.5e-18 95.9 467 23.1
Mapoly0046s0036 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.1e-17 95.5 449 24.9
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.2e-17 94.0 486 22.6
CBR_g12182 Chara braunii HOM05D003532 ORTHO05D003298 3.2e-17 94.0 449 22.3
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 4.2e-17 93.6 460 24.3
Mapoly0157s0002 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.0e-15 89.0 446 23.3
CBR_g12864 Chara braunii HOM05D003532 ORTHO05D003298 2.3e-15 87.8 476 21.6
CBR_g38576 Chara braunii HOM05D003532 ORTHO05D003298 7.5e-14 82.8 513 23.6
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 1.3e-13 82.0 500 23.4
CBR_g12867 Chara braunii HOM05D000019 ORTHO05D003298 6.3e-13 79.7 480 22.3
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.8e-12 78.2 383 23.0
AagrBONN_evm.TU.Sc2ySwM_368.236 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.2e-11 75.5 238 27.3
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 2.0e-11 74.7 482 22.4
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 2.0e-11 74.7 485 21.0
Lsat_1_v5_gn_3_17020 Lactuca sativa HOM05D003532 ORTHO05D003298 2.0e-11 74.7 84 51.2
AagrBONN_evm.TU.Sc2ySwM_368.626 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.3e-10 72.0 149 30.2
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 2.9e-10 70.9 374 22.7
CAN.G205.7 Capsicum annuum HOM05D003532 ORTHO05D003298 3.8e-10 70.5 50 72.0
AagrBONN_evm.TU.Sc2ySwM_117.4103 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.1e-09 68.9 130 31.5
AagrBONN_evm.TU.Sc2ySwM_117.4056 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.2e-09 67.4 205 27.8
CBR_g12862 Chara braunii HOM05D003532 ORTHO05D003298 3.2e-09 67.4 361 22.4
AagrBONN_evm.TU.Sc2ySwM_344.1379 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.2e-08 65.5 198 27.8
AagrBONN_evm.TU.Sc2ySwM_344.5219 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.2e-08 65.5 131 29.8
AagrBONN_evm.TU.Sc2ySwM_117.4062 Anthoceros agrestis HOM05D003532 ORTHO05D015853 1.6e-08 65.1 145 29.7
AagrBONN_evm.TU.Sc2ySwM_362.995 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.6e-08 65.1 174 30.5
AagrBONN_evm.TU.Sc2ySwM_362.2508 Anthoceros agrestis HOM05D002844 ORTHO05D010627 3.6e-08 63.9 206 24.8
AagrBONN_evm.TU.Sc2ySwM_368.2565 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.1e-08 63.2 126 38.9
CBR_g85241 Chara braunii HOM05D003532 ORTHO05D003298 8.0e-08 62.8 273 20.5
AagrBONN_evm.TU.Sc2ySwM_228.83 Anthoceros agrestis HOM05D002844 ORTHO05D010627 4.0e-07 60.5 108 36.1
AagrBONN_evm.TU.Sc2ySwM_344.5221 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.0e-07 60.5 85 32.9
AagrBONN_evm.TU.Sc2ySwM_117.3748 Anthoceros agrestis HOM05D002844 ORTHO05D010627 5.2e-07 60.1 133 30.1
AagrBONN_evm.TU.Sc2ySwM_368.360__361 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.2e-07 60.1 174 28.2
AagrBONN_evm.TU.Sc2ySwM_340.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 6.8e-07 59.7 174 26.4
AagrBONN_evm.TU.Sc2ySwM_340.456 Anthoceros agrestis HOM05D002844 ORTHO05D010627 8.8e-07 59.3 205 28.3
AagrBONN_evm.TU.Sc2ySwM_362.449 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.0e-06 58.2 136 27.9
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 4.4e-06 57.0 159 30.2
AagrBONN_evm.TU.Sc2ySwM_362.458 Anthoceros agrestis HOM05D002844 ORTHO05D010627 4.4e-06 57.0 152 28.9
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 7.5e-06 56.2 152 28.9


User provided reference genes

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