Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 5.1e-160 567.8 306 100.0
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.4e-151 538.1 306 94.8
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 2.2e-150 535.8 306 94.4
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 3.1e-141 505.4 303 88.4
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.2e-138 495.4 303 86.8
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 8.0e-137 490.7 303 85.1
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 2.3e-112 409.5 302 74.5
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 3.7e-110 402.1 306 69.0
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.9e-106 389.8 303 69.3
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 9.5e-106 387.5 303 69.0
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 3.1e-104 382.5 306 66.3
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.1e-98 364.0 303 66.3
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 8.9e-96 354.4 306 66.3
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.3e-94 350.5 304 66.1
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 1.7e-94 350.1 340 57.4
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.1e-93 347.4 306 65.0
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.0e-91 339.3 337 56.4
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 8.7e-91 337.8 312 63.1
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 2.8e-89 332.8 308 61.7
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 3.4e-87 325.9 308 59.1
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.4e-85 319.7 303 59.4
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 2.1e-84 316.6 366 51.1
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 3.3e-82 309.3 304 58.6
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.8e-81 305.4 302 58.9
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 1.4e-80 303.9 320 53.8
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 2.4e-80 303.1 304 56.6
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 3.1e-80 302.8 306 55.9
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 9.0e-80 301.2 306 55.6
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 3.4e-79 299.3 306 54.2
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 3.4e-79 299.3 308 54.5
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 9.9e-79 297.7 327 53.8
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 6.4e-78 295.0 303 56.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 4.6e-76 288.9 334 52.1
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 4.6e-76 288.9 306 55.2
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 1.5e-74 283.9 309 54.0
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.3e-73 280.8 308 54.2
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.6e-73 280.4 302 53.3
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 2.1e-73 280.0 281 56.9
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.1e-73 280.0 330 50.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.8e-73 279.6 306 54.9
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 3.7e-73 279.3 308 53.6
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 3.7e-73 279.3 305 53.8
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 2.4e-72 276.6 295 51.5
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.1e-72 276.2 306 52.9
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 3.1e-72 276.2 302 51.3
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.5e-71 273.9 306 52.3
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 2.0e-71 273.5 234 62.4
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 5.8e-71 271.9 326 51.8
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.3e-70 270.8 334 49.4
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.9e-70 269.6 303 52.8
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.9e-69 266.9 330 50.3
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.5e-69 266.5 284 56.7
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.5e-69 266.5 306 50.7
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 4.2e-69 265.8 308 50.3
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 7.9e-68 261.5 307 50.5
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 3.0e-67 259.6 329 47.4
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.9e-66 256.9 310 50.6
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.5e-66 256.5 306 48.4
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 3.3e-66 256.1 309 50.2
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 9.6e-66 254.6 300 49.0
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.3e-65 254.2 309 48.5
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.3e-65 254.2 309 50.5
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.6e-65 253.8 303 48.2
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.6e-65 253.8 309 49.8
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.6e-65 253.8 260 56.2
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.6e-65 253.8 302 51.3
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.8e-65 253.1 305 51.8
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.4e-64 250.8 306 49.7
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.8e-64 250.4 299 47.5
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 1.8e-64 250.4 327 48.9
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 5.3e-64 248.8 309 47.9
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.5e-63 247.3 307 48.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.5e-63 247.3 300 48.0
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 2.0e-63 246.9 301 50.5
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.5e-63 245.7 307 49.2
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 5.8e-63 245.4 304 47.4
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 7.6e-63 245.0 306 47.1
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.0e-62 244.6 303 48.2
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.0e-62 244.6 309 48.5
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.0e-62 244.6 307 49.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 1.0e-62 244.6 313 47.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.7e-62 243.8 307 48.9
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.9e-62 243.0 298 44.6
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.5e-61 238.8 303 48.8
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 9.3e-61 238.0 320 47.5
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 1.6e-60 237.3 221 58.4
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.3e-59 234.2 288 50.3
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 3.9e-59 232.6 307 48.9
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 8.7e-59 231.5 349 44.7
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 3.3e-58 229.6 324 42.3
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 5.7e-58 228.8 308 47.7
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.6e-57 227.3 288 50.0
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.6e-57 227.3 273 46.9
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.8e-57 225.7 227 53.3
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 8.2e-57 224.9 307 44.0
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 8.2e-57 224.9 249 51.0
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.2e-57 224.9 251 50.2
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.4e-56 223.4 240 54.2
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 4.1e-56 222.6 351 41.9
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 6.9e-56 221.9 239 54.0
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.5e-55 220.7 304 42.8
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.4e-55 219.5 277 48.7
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 5.9e-55 218.8 309 42.7
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 5.0e-54 215.7 307 43.0
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 5.0e-54 215.7 307 43.3
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 6.5e-54 215.3 224 54.9
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 7.2e-53 211.8 310 41.6
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 9.4e-53 211.5 320 43.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.6e-52 210.7 307 41.7
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 1.6e-52 210.7 307 40.7
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 2.1e-52 210.3 304 40.8
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 2.7e-52 209.9 304 40.8
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 6.1e-52 208.8 300 44.7
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 7.9e-52 208.4 307 41.0
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.1e-50 204.5 183 61.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.1e-48 198.0 305 40.0
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.1e-48 198.0 306 39.9
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 1.4e-48 197.6 305 39.7
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.1e-48 196.1 295 42.7
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 6.9e-48 195.3 294 41.8
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 2.9e-46 189.9 298 40.6
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 2.1e-44 183.7 194 50.0
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 2.1e-44 183.7 251 46.6
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 6.1e-44 182.2 295 40.3
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.9e-43 179.5 288 44.4
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 3.7e-41 172.9 304 40.1
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.4e-40 171.0 296 38.5
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.1e-36 157.1 286 39.2
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.1e-34 151.4 299 35.5
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 1.3e-33 147.9 325 35.7
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.4e-32 144.4 137 53.3
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 3.5e-31 139.8 225 36.9
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 5.9e-31 139.0 224 42.4
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 2.9e-30 136.7 218 38.1
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.6e-28 131.0 265 32.5
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 2.0e-26 124.0 152 41.4
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 5.0e-22 109.4 149 40.9
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 2.7e-20 103.6 192 36.5
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.7e-20 102.8 151 40.4
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.0e-19 101.7 210 33.3
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 6.8e-19 99.0 195 36.4
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-17 94.4 230 33.0
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 2.8e-17 93.6 227 33.0
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 5.9e-15 85.9 99 55.6
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 5.9e-15 85.9 65 63.1
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 2.3e-14 84.0 182 31.9
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.1e-13 81.6 181 29.8
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 5.5e-13 79.3 127 31.5
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.2e-10 71.6 127 31.5
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.7e-09 67.8 220 24.5
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 9.2e-08 62.0 100 40.0
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 5.9e-07 59.3 83 43.4
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 1.0e-06 58.5 199 26.1


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