Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018056 Solanum tuberosum HOM05D000016 ORTHO05D017808 1.1e-22 109.0 52 100.0
PGSC0003DMG400001944 Solanum tuberosum HOM05D000016 ORTHO05D000725 3.2e-22 107.5 52 98.1
PGSC0003DMG401001941 Solanum tuberosum HOM05D000016 ORTHO05D000725 9.4e-22 105.9 52 96.2
Solyc04g005370.2 Solanum lycopersicum HOM05D000016 ORTHO05D000725 3.6e-21 104.0 52 96.2
Sopen04g001360 Solanum pennellii HOM05D000016 ORTHO05D000725 3.6e-21 104.0 52 96.2
Solyc04g005360.1 Solanum lycopersicum HOM05D000016 ORTHO05D000725 4.7e-21 103.6 52 96.2
Sopen04g001350 Solanum pennellii HOM05D000016 ORTHO05D000725 2.3e-20 101.3 52 92.3
PGSC0003DMG400017135 Solanum tuberosum HOM05D000016 ORTHO05D000725 3.3e-19 97.4 52 90.4
PGSC0003DMG402001941 Solanum tuberosum HOM05D000016 ORTHO05D000725 9.7e-19 95.9 52 88.5
PGSC0003DMG400001098 Solanum tuberosum HOM05D000016 ORTHO05D000725 2.2e-18 94.7 52 88.5
CAN.G567.114 Capsicum annuum HOM05D000016 ORTHO05D000725 4.1e-17 90.5 51 86.3
Sopen04g012340 Solanum pennellii HOM05D000016 ORTHO05D000725 5.3e-17 90.1 52 78.8
Solyc12g005170.2 Solanum lycopersicum HOM05D000016 ORTHO05D000725 1.2e-16 89.0 50 82.0
Sopen12g001160 Solanum pennellii HOM05D000016 ORTHO05D000725 1.2e-16 89.0 50 84.0
Solyc08g083450.2 Solanum lycopersicum HOM05D000016 ORTHO05D000725 4.5e-16 87.0 50 82.0
Sopen08g021700 Solanum pennellii HOM05D000016 ORTHO05D000725 4.5e-16 87.0 50 80.0
PGSC0003DMG400033617 Solanum tuberosum HOM05D000016 ORTHO05D000725 1.0e-15 85.9 50 80.0
Solyc04g025410.1 Solanum lycopersicum HOM05D000016 ORTHO05D000725 2.2e-15 84.7 52 75.0
CAN.G1563.10 Capsicum annuum HOM05D000016 ORTHO05D000725 2.9e-15 84.3 50 76.0
Nitab4.5_0000175g0330 Nicotiana tabacum HOM05D000016 ORTHO05D000725 2.5e-14 81.3 50 74.0
Nitab4.5_0001052g0150 Nicotiana tabacum HOM05D000016 ORTHO05D000725 3.0e-12 74.3 50 70.0
Nitab4.5_0000175g0290 Nicotiana tabacum HOM05D000016 ORTHO05D000725 5.2e-12 73.6 45 75.6
Nitab4.5_0007313g0010 Nicotiana tabacum HOM05D000016 ORTHO05D000725 4.4e-11 70.5 52 65.4
Nitab4.5_0006273g0010 Nicotiana tabacum HOM05D000016 ORTHO05D000725 2.4e-09 64.7 51 62.7
Nitab4.5_0001814g0030 Nicotiana tabacum HOM05D000016 ORTHO05D000725 2.0e-08 61.6 51 60.8
CiPaw.01G052000 Carya illinoinensis HOM05D000016 ORTHO05D000725 3.5e-08 60.8 51 62.7
Nitab4.5_0004165g0060 Nicotiana tabacum HOM05D000016 ORTHO05D000725 3.5e-08 60.8 51 60.8
Nitab4.5_0000647g0290 Nicotiana tabacum HOM05D000016 ORTHO05D000725 5.9e-08 60.1 51 60.8
Peaxi162Scf00502g00829 Petunia axillaris HOM05D000016 ORTHO05D000725 5.9e-08 60.1 51 62.7
CiPaw.01G051800 Carya illinoinensis HOM05D000016 ORTHO05D000725 7.7e-08 59.7 50 62.0
Peaxi162Scf00502g00828 Petunia axillaris HOM05D000016 ORTHO05D000725 1.0e-07 59.3 51 60.8
CiPaw.01G051900 Carya illinoinensis HOM05D000016 ORTHO05D000725 1.3e-07 58.9 51 62.7
Nitab4.5_0011391g0010 Nicotiana tabacum HOM05D000016 ORTHO05D000725 2.9e-07 57.8 51 58.8
BcaB02g09519 Brassica carinata HOM05D000016 ORTHO05D000725 3.8e-07 57.4 50 60.0
Lj1A117T29 Lonicera japonica HOM05D000016 ORTHO05D000725 5.0e-07 57.0 50 60.0
Lj1A118T58 Lonicera japonica HOM05D000016 ORTHO05D000725 5.0e-07 57.0 50 60.0
ECA232G3388 Erigeron canadensis HOM05D000016 ORTHO05D000725 6.5e-07 56.6 50 56.0
ECA246G3579 Erigeron canadensis HOM05D000016 ORTHO05D000725 6.5e-07 56.6 50 58.0
Prupe.7G129500 Prunus persica HOM05D000016 ORTHO05D000725 8.5e-07 56.2 50 56.0
RcHm_v2.0_Chr7g0218701 Rosa chinensis HOM05D000016 ORTHO05D000725 1.1e-06 55.8 51 56.9
Lalb_Chr15g0085841 Lupinus albus HOM05D000016 ORTHO05D017808 1.5e-06 55.5 50 56.0
Oeu005855.1 Olea europaea HOM05D000016 ORTHO05D000725 1.5e-06 55.5 50 56.0
Duzib106G0064 Durio zibethinus HOM05D000016 ORTHO05D000725 1.9e-06 55.1 50 58.0
Duzib106G0258 Durio zibethinus HOM05D000016 ORTHO05D000725 1.9e-06 55.1 50 58.0
Duzib114G0758 Durio zibethinus HOM05D000016 ORTHO05D000725 1.9e-06 55.1 50 58.0
Lj1A115G13 Lonicera japonica HOM05D000016 ORTHO05D000725 1.9e-06 55.1 50 58.0
Lj1A118G57 Lonicera japonica HOM05D000016 ORTHO05D017808 2.5e-06 54.7 50 58.0
Lalb_Chr15g0085771 Lupinus albus HOM05D000016 ORTHO05D000725 2.5e-06 54.7 50 56.0
Nitab4.5_0005263g0040 Nicotiana tabacum HOM05D000016 ORTHO05D000725 2.5e-06 54.7 27 85.2
RcHm_v2.0_Chr3g0470341 Rosa chinensis HOM05D000016 ORTHO05D000725 2.5e-06 54.7 50 58.0
Atru.chr10.2306 Acer truncatum HOM05D000016 ORTHO05D000725 3.2e-06 54.3 50 56.0
Lj1C118T1 Lonicera japonica HOM05D000016 ORTHO05D000725 3.2e-06 54.3 50 58.0
Dinv28730 Davidia involucrata HOM05D000016 ORTHO05D000725 4.2e-06 53.9 53 56.6
Rhsim13G0059400 Rhododendron simsii HOM05D000016 ORTHO05D000725 4.2e-06 53.9 50 54.0
TAR369G0899 Trochodendron aralioides HOM05D000016 ORTHO05D000725 4.2e-06 53.9 51 58.8
BcaB06g29214 Brassica carinata HOM05D000016 ORTHO05D000725 5.5e-06 53.5 50 54.0
BcaC02g07282 Brassica carinata HOM05D000016 ORTHO05D000725 5.5e-06 53.5 50 54.0
C04p69300 Brassica napus HOM05D000016 ORTHO05D000725 5.5e-06 53.5 50 54.0
BolC4t28429H Brassica oleracea HOM05D000016 ORTHO05D000725 5.5e-06 53.5 50 54.0
Cfa014841 Carpinus fangiana HOM05D000016 ORTHO05D000725 7.2e-06 53.1 51 58.8
COL.COLO4_06485 Corchorus olitorius HOM05D000016 ORTHO05D000725 7.2e-06 53.1 50 52.0
COL.COLO4_19368 Corchorus olitorius HOM05D000016 ORTHO05D000725 7.2e-06 53.1 50 52.0
ECA232G0971 Erigeron canadensis HOM05D000016 ORTHO05D000725 7.2e-06 53.1 50 54.0
Lsat_1_v5_gn_4_184141 Lactuca sativa HOM05D000016 ORTHO05D000725 7.2e-06 53.1 50 54.0
RcHm_v2.0_Chr1g0327171 Rosa chinensis HOM05D000016 ORTHO05D000725 7.2e-06 53.1 50 56.0
Cfa005650 Carpinus fangiana HOM05D000016 ORTHO05D000725 9.5e-06 52.8 51 58.8
Haze_11533 Corylus avellana HOM05D000016 ORTHO05D000725 9.5e-06 52.8 51 58.8
Duzib106G0179 Durio zibethinus HOM05D000016 ORTHO05D000725 9.5e-06 52.8 50 56.0
Duzib106G1910 Durio zibethinus HOM05D000016 ORTHO05D000725 9.5e-06 52.8 50 56.0
ECA232G4007 Erigeron canadensis HOM05D000016 ORTHO05D000725 9.5e-06 52.8 50 56.0
FvH4_3g09210 Fragaria vesca HOM05D000016 ORTHO05D000725 9.5e-06 52.8 50 54.0
FAN11G1954 Fragaria x ananassa HOM05D000016 ORTHO05D000725 9.5e-06 52.8 50 54.0
Lj1A119T29 Lonicera japonica HOM05D000016 ORTHO05D000725 9.5e-06 52.8 53 56.6


User provided reference genes

Program Settings