Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.4e-66 256.1 128 100.0
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 2.2e-40 169.1 87 95.4
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 2.9e-40 168.7 90 90.0
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 4.2e-39 164.9 90 87.8
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.2e-38 163.3 87 90.8
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 1.6e-38 162.9 90 86.7
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 2.3e-37 159.1 90 83.3
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 5.7e-36 154.5 90 80.0
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 5.7e-36 154.5 90 82.2
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 7.4e-36 154.1 90 80.0
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 2.2e-27 125.9 89 64.0
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 6.3e-27 124.4 94 62.8
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 1.1e-26 123.6 90 63.3
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.4e-26 123.2 93 63.4
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 1.8e-26 122.9 90 60.0
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 4.1e-26 121.7 90 61.1
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 5.3e-26 121.3 94 59.6
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 7.0e-26 120.9 90 63.3
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 7.0e-26 120.9 90 57.8
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 1.2e-25 120.2 93 61.3
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.2e-25 120.2 90 60.0
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 1.2e-25 120.2 90 61.1
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 3.5e-25 118.6 94 56.4
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 3.5e-25 118.6 90 60.0
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 3.5e-25 118.6 89 61.8
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 3.5e-25 118.6 125 48.0
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 4.5e-25 118.2 90 60.0
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 4.5e-25 118.2 90 58.9
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 4.5e-25 118.2 90 60.0
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 5.9e-25 117.9 87 62.1
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 7.7e-25 117.5 99 58.6
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.3e-24 116.7 90 57.8
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.7e-24 116.3 124 48.4
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 2.2e-24 115.9 90 56.7
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 8.5e-24 114.0 113 49.6
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 8.5e-24 114.0 93 58.1
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 8.5e-24 114.0 92 58.7
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 1.1e-23 113.6 90 61.1
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.5e-23 113.2 93 58.1
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 1.5e-23 113.2 93 58.1
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.9e-23 112.8 90 57.8
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 2.5e-23 112.5 90 55.6
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 3.2e-23 112.1 88 59.1
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 3.2e-23 112.1 88 59.1
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 4.2e-23 111.7 90 57.8
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.2e-22 110.2 90 55.6
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 1.6e-22 109.8 89 58.4
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 2.7e-22 109.0 90 58.9
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 6.1e-22 107.8 90 56.7
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 1.8e-21 106.3 93 58.1
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 3.0e-21 105.5 103 49.5
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 5.2e-21 104.8 90 54.4
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 8.8e-21 104.0 94 54.3
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 1.1e-20 103.6 86 52.3
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.1e-20 103.6 84 57.1
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 1.5e-20 103.2 90 53.3
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 1.5e-20 103.2 90 53.3
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 2.0e-20 102.8 104 51.9
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 2.6e-20 102.4 88 52.3
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 2.6e-20 102.4 88 52.3
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 2.6e-20 102.4 88 52.3
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 3.3e-20 102.1 112 44.6
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 4.4e-20 101.7 124 41.1
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 4.4e-20 101.7 78 56.4
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 7.4e-20 100.9 86 51.2
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 7.4e-20 100.9 82 56.1
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 9.7e-20 100.5 81 54.3
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 1.3e-19 100.1 88 52.3
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 1.3e-19 100.1 88 52.3
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 1.3e-19 100.1 86 52.3
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 2.2e-19 99.4 81 54.3
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 2.2e-19 99.4 81 54.3
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 2.2e-19 99.4 77 54.5
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 2.8e-19 99.0 78 55.1
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 3.7e-19 98.6 80 55.0
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 4.8e-19 98.2 90 48.9
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 8.2e-19 97.4 75 56.0
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 1.1e-18 97.1 73 58.9
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 1.1e-18 97.1 90 51.1
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 1.1e-18 97.1 90 50.0
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 1.4e-18 96.7 124 37.9
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 1.4e-18 96.7 86 48.8
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.4e-18 95.9 71 59.2
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 2.4e-18 95.9 90 50.0
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 3.1e-18 95.5 78 52.6
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 3.1e-18 95.5 86 48.8
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 5.3e-18 94.7 90 51.1
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 9.1e-18 94.0 86 48.8
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 9.1e-18 94.0 86 48.8
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 1.6e-17 93.2 88 46.6
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 4.5e-17 91.7 70 58.6
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 4.5e-17 91.7 70 58.6
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 7.7e-17 90.9 76 59.2
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 2.2e-16 89.4 93 46.2
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 2.9e-16 89.0 93 46.2
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 2.9e-16 89.0 94 44.7
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 8.5e-16 87.4 91 46.2
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.9e-15 86.3 94 43.6
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.9e-15 86.3 93 44.1
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 1.9e-15 86.3 91 46.2
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.9e-15 86.3 94 44.7
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.9e-15 86.3 94 44.7
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 2.5e-15 85.9 93 44.1
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 2.5e-15 85.9 79 55.7
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 5.5e-15 84.7 71 56.3
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 5.5e-15 84.7 93 45.2
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 1.2e-14 83.6 89 46.1
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.6e-14 83.2 94 41.5
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 2.1e-14 82.8 94 41.5
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 2.1e-14 82.8 94 41.5
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 2.1e-14 82.8 94 41.5
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 2.1e-14 82.8 94 41.5
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 2.1e-14 82.8 94 41.5
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.1e-14 82.8 90 44.4
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.8e-13 79.7 134 35.8
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.8e-13 79.7 50 72.0
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 6.8e-13 77.8 75 46.7
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 8.8e-13 77.4 76 46.1
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.2e-12 77.0 133 33.8
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 2.8e-11 72.4 103 40.8
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 1.8e-10 69.7 85 41.2
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 9.1e-10 67.4 80 40.0


User provided reference genes

Program Settings