Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400017979 Solanum tuberosum HOM05D000541 ORTHO05D000137 7.4e-84 314.3 222 100.0
PGSC0003DMG400004209 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.9e-43 179.5 92 88.0
Sopen07g014800 Solanum pennellii HOM05D000541 ORTHO05D000137 6.0e-41 171.8 96 79.2
Sopen07g007480 Solanum pennellii HOM05D007732 ORTHO05D010105 9.5e-39 164.5 92 79.3
Sopen08g015080 Solanum pennellii HOM05D000047 ORTHO05D009630 2.2e-35 153.3 92 72.8
Sopen12g009250 Solanum pennellii HOM05D000541 ORTHO05D000137 3.5e-33 146.0 85 77.6
Sopen02g006280 Solanum pennellii HOM05D005284 ORTHO05D006609 3.3e-31 139.4 81 77.8
CAN.G313.6 Capsicum annuum HOM05D000541 ORTHO05D000137 2.3e-24 116.7 83 57.8
CAN.G917.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-23 114.4 87 54.0
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-23 112.8 83 55.4
CAN.G606.27 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-21 107.1 101 48.5
CAN.G134.209 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-21 106.7 98 50.0
CAN.G1056.5 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-21 106.3 79 57.0
CAN.G610.2 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-21 105.5 95 49.5
CAN.G1302.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-20 103.6 95 50.5
CAN.G572.32 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-20 103.2 95 50.5
CAN.G1342.7 Capsicum annuum HOM05D000541 ORTHO05D000137 9.9e-20 101.3 95 48.4
Sopen12g017740 Solanum pennellii HOM05D007732 ORTHO05D000137 9.9e-20 101.3 53 84.9
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.3e-19 100.9 85 48.2
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.2e-19 100.1 85 49.4
CAN.G1802.2 Capsicum annuum HOM05D000541 ORTHO05D000137 4.9e-19 99.0 95 47.4
PGSC0003DMG400021760 Solanum tuberosum HOM05D007732 ORTHO05D000137 8.4e-19 98.2 47 93.6
CAN.G1165.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-18 97.8 95 47.4
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.4e-18 97.4 85 47.1
CAN.G359.10 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-18 97.1 95 48.4
CAN.G27.18 Capsicum annuum HOM05D000541 ORTHO05D000137 2.4e-18 96.7 95 49.5
CAN.G222.34 Capsicum annuum HOM05D000541 ORTHO05D000137 3.2e-18 96.3 95 48.4
CAN.G222.35 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-18 95.9 83 49.4
CAN.G338.42 Capsicum annuum HOM05D000541 ORTHO05D000137 4.2e-18 95.9 94 48.9
CAN.G327.7 Capsicum annuum HOM05D000541 ORTHO05D000137 5.4e-18 95.5 96 45.8
Sopen01g023300 Solanum pennellii HOM05D000541 ORTHO05D000137 5.4e-18 95.5 47 89.4
Sopen03g027130 Solanum pennellii HOM05D007732 ORTHO05D000137 5.4e-18 95.5 47 87.2
Sopen04g020260 Solanum pennellii HOM05D007732 ORTHO05D000137 5.4e-18 95.5 47 89.4
CAN.G182.21 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-18 95.1 95 47.4
CAN.G377.15 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-18 95.1 90 47.8
Sopen01g016520 Solanum pennellii HOM05D000541 ORTHO05D000137 1.2e-17 94.4 47 89.4
PGSC0003DMG400038255 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.2e-17 94.4 90 43.3
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-17 94.0 85 48.2
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-17 94.0 85 48.2
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-17 94.0 85 48.2
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-17 94.0 85 48.2
CAN.G1310.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-17 93.2 83 45.8
CAN.G248.34 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-17 93.2 95 45.3
CAN.G476.13 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-17 93.2 95 46.3
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 2.7e-17 93.2 93 43.0
CAN.G1003.32 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-17 92.8 95 46.3
CAN.G174.8 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-17 92.8 97 46.4
Sopen05g014530 Solanum pennellii HOM05D007732 ORTHO05D010105 3.5e-17 92.8 48 85.4
Sopen07g019810 Solanum pennellii HOM05D000541 ORTHO05D000137 3.5e-17 92.8 87 42.5
Sopen10g006880 Solanum pennellii HOM05D000541 ORTHO05D000137 3.5e-17 92.8 84 42.9
Sopen10g022900 Solanum pennellii HOM05D000011 ORTHO05D000137 3.5e-17 92.8 84 41.7
PGSC0003DMG400002289 Solanum tuberosum HOM05D007732 ORTHO05D010105 3.5e-17 92.8 47 87.2
CAN.G134.50 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-17 92.4 96 46.9
Sopen01g027580 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-17 92.4 103 37.9
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 4.6e-17 92.4 93 43.0
CAN.G227.2 Capsicum annuum HOM05D000541 ORTHO05D000137 6.0e-17 92.0 90 45.6
Sopen03g030630 Solanum pennellii HOM05D000541 ORTHO05D000137 6.0e-17 92.0 84 41.7
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 6.0e-17 92.0 84 42.9
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 6.0e-17 92.0 84 42.9
Sopen07g007130 Solanum pennellii HOM05D007732 ORTHO05D000137 1.0e-16 91.3 47 87.2
PGSC0003DMG400019169 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.0e-16 91.3 84 44.0
CAN.G268.24 Capsicum annuum HOM05D000541 ORTHO05D000137 1.7e-16 90.5 99 39.4
Sopen05g027720 Solanum pennellii HOM05D000541 ORTHO05D000137 1.7e-16 90.5 93 43.0
PGSC0003DMG400001026 Solanum tuberosum HOM05D024590 ORTHO05D026188 2.3e-16 90.1 47 87.2
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 3.0e-16 89.7 84 41.7
Sopen09g012970 Solanum pennellii HOM05D007732 ORTHO05D010105 3.9e-16 89.4 92 48.9
PGSC0003DMG400002216 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.9e-16 89.4 45 84.4
CAN.G442.9 Capsicum annuum HOM05D000541 ORTHO05D000137 5.1e-16 89.0 83 45.8
PGSC0003DMG400044701 Solanum tuberosum HOM05D000541 ORTHO05D000137 6.6e-16 88.6 85 48.2
CAN.G733.7 Capsicum annuum HOM05D000541 ORTHO05D000137 8.7e-16 88.2 83 47.0
CAN.G165.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-15 87.8 83 42.2
Sopen06g014640 Solanum pennellii HOM05D007732 ORTHO05D000137 1.1e-15 87.8 46 82.6
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-15 87.4 83 44.6
Sopen01g009410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-15 87.4 47 85.1
Sopen03g011290 Solanum pennellii HOM05D007732 ORTHO05D010105 1.5e-15 87.4 47 83.0
Sopen12g020050 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-15 87.0 46 87.0
CAN.G1842.2 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-15 86.7 83 41.0
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 2.5e-15 86.7 83 41.0
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 4.3e-15 85.9 88 45.5
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 5.6e-15 85.5 84 40.5
CAN.G905.30 Capsicum annuum HOM05D000541 ORTHO05D000137 7.3e-15 85.1 91 40.7
Sopen04g012070 Solanum pennellii HOM05D007732 ORTHO05D010105 9.6e-15 84.7 46 82.6
CAN.G334.18 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-14 83.2 88 46.6
CAN.G467.20 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-14 83.2 84 46.4
PGSC0003DMG400047195 Solanum tuberosum HOM05D009555 ORTHO05D000137 3.6e-14 82.8 47 76.6
CAN.G294.30 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-14 82.0 83 38.6
CAN.G568.8 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-14 81.6 83 43.4
PGSC0003DMG400037440 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.1e-14 81.6 74 45.9
CAN.G529.16 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-13 80.9 79 44.3
CAN.G6.16 Capsicum annuum HOM05D000541 ORTHO05D000137 1.4e-13 80.9 95 43.2
Sopen00g005360 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-13 80.9 97 43.3
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 1.4e-13 80.9 102 40.2
CAN.G2821.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.8e-13 80.5 83 38.6
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 4.0e-13 79.3 102 40.2
CAN.G357.3 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-13 78.6 90 42.2
CAN.G478.20 Capsicum annuum HOM05D000541 ORTHO05D000137 6.9e-13 78.6 83 37.3
CAN.G1006.6 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-12 77.8 78 43.6
PGSC0003DMG400016047 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.2e-12 77.8 46 80.4
Sopen08g008880 Solanum pennellii HOM05D000541 ORTHO05D000137 2.6e-12 76.6 44 72.7
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.4e-12 76.3 87 43.7
PGSC0003DMG400027246 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.4e-12 76.3 91 38.5
Sopen08g019370 Solanum pennellii HOM05D000541 ORTHO05D012255 1.3e-11 74.3 79 44.3
Sopen12g018430 Solanum pennellii HOM05D007732 ORTHO05D000137 3.8e-11 72.8 45 75.6
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-11 72.4 58 51.7
CAN.G304.2 Capsicum annuum HOM05D000541 ORTHO05D000137 6.4e-11 72.0 78 42.3
PGSC0003DMG400028017 Solanum tuberosum HOM05D007732 ORTHO05D010105 8.4e-11 71.6 39 84.6
CAN.G219.61 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-10 68.6 63 46.0
CAN.G241.31 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-10 68.6 72 43.1
Sopen03g016100 Solanum pennellii HOM05D007732 ORTHO05D010105 7.1e-10 68.6 34 91.2
Sopen08g008470 Solanum pennellii HOM05D007732 ORTHO05D000137 1.6e-09 67.4 40 72.5
CAN.G954.17 Capsicum annuum HOM05D000541 ORTHO05D000137 7.9e-09 65.1 59 49.2
CAN.G1074.3 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-08 63.2 47 57.4
CAN.G1551.8 Capsicum annuum HOM05D000541 ORTHO05D000137 6.7e-08 62.0 84 41.7
CAN.G158.15 Capsicum annuum HOM05D000541 ORTHO05D000137 6.7e-08 62.0 68 36.8
CAN.G184.69 Capsicum annuum HOM05D002308 ORTHO05D002535 6.7e-08 62.0 48 56.2
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-07 61.2 81 35.8
CAN.G567.51 Capsicum annuum HOM05D000541 ORTHO05D000137 1.5e-07 60.8 51 54.9
CAN.G1299.4 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.7 48 56.2
CAN.G52.13 Capsicum annuum HOM05D000541 ORTHO05D000137 3.3e-07 59.7 51 52.9
CAN.G1986.7 Capsicum annuum HOM05D000679 ORTHO05D000482 4.3e-07 59.3 84 31.0
CAN.G773.9 Capsicum annuum HOM05D000541 ORTHO05D000137 5.6e-07 58.9 48 56.2
CAN.G201.32 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-07 58.5 61 45.9
CAN.G354.41 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-07 58.5 64 39.1
CAN.G598.15 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-07 58.5 48 54.2
CAN.G625.33 Capsicum annuum HOM05D000541 ORTHO05D000137 7.4e-07 58.5 48 56.2
CAN.G321.7 Capsicum annuum HOM05D000541 ORTHO05D000137 9.6e-07 58.2 92 37.0
CAN.G686.6 Capsicum annuum HOM05D000541 ORTHO05D000137 9.6e-07 58.2 48 56.2
Sopen05g027310 Solanum pennellii HOM05D000541 ORTHO05D000137 9.6e-07 58.2 74 37.8
CAN.G271.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.8 100 37.0
CAN.G61.34 Capsicum annuum HOM05D000541 ORTHO05D000137 1.3e-06 57.8 48 52.1
CAN.G645.28 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-06 57.4 48 54.2
CAN.G578.15 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-06 57.0 59 45.8
CAN.G587.42 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-06 57.0 48 54.2
CAN.G864.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-06 57.0 48 54.2
CAN.G100.33 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.6 47 53.2
CAN.G279.30 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.6 48 54.2
CAN.G388.78 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.6 48 52.1
CAN.G632.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.6 48 50.0
CAN.G809.25 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-06 56.6 48 52.1
CAN.G184.6 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-06 56.2 48 52.1
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.6e-06 56.2 81 34.6
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.6e-06 56.2 82 32.9
CAN.G203.9 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.8 110 33.6
CAN.G518.17 Capsicum annuum HOM05D000541 ORTHO05D000137 4.8e-06 55.8 47 53.2
CAN.G1079.1 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 47 53.2
CAN.G1097.2 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 47 53.2
CAN.G1334.14 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 48 50.0
CAN.G1358.1 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 60 41.7
CAN.G1838.3 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 47 53.2
CAN.G81.1 Capsicum annuum HOM05D000541 ORTHO05D000137 6.2e-06 55.5 47 53.2
CAN.G125.18 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-06 55.1 51 43.1
CAN.G147.9 Capsicum annuum HOM05D000541 ORTHO05D009561 8.1e-06 55.1 48 52.1
CAN.G157.1 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-06 55.1 48 52.1
CAN.G22.16 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-06 55.1 47 51.1
CAN.G590.5 Capsicum annuum HOM05D000541 ORTHO05D000137 8.1e-06 55.1 48 52.1


User provided reference genes

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